Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1382 138 1e-27 seq788 87.8 2e-12 >seq1382 Length=24816 Score = 138 bits (152), Expect = 1e-27 Identities = 355/527 (67%), Gaps = 23/527 (4%) Strand=Plus/Plus Query 172465 TTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAG 172524 ||||| ||| |||||||| | ||||| | ||| || || || | || ||| ||| Sbjct 14861 TTTGGGATGGCAATGGTTCAAGAGAATTCCTTGATAAATTAGGTTTAAAGGATAGAGAAG 14920 Query 172525 AAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCG 172584 ||||||||||| ||| ||||||||||||||||| | ||| || ||| |||||| | Sbjct 14921 TGGGTGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAATATAAAG 14980 Query 172585 ACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATT-AAGTCAAACTATTA-ATAC 172642 ||| |||| ||||| || ||||||| |||||||| ||| || || || | || Sbjct 14981 ACTTCAATACTGATTATACTAATAAAGGAGTTGACCAATTGAAG--GAAGTAATAGAAAC 15038 Query 172643 TTTACAAAACAACCCA---GAAAGTAGAAGGATGTTAATTGATAG-TTGGAAT-GTACCT 172697 | ||||||| ||| || |||||| || ||||| || ||||||| || Sbjct 15039 AATTAAAAACAATCCAACGGATCGTAGAATTAT----ATTGACAGCTTGGAATCCTAGTG 15094 Query 172698 CAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGaaaa 172757 | | || |||||||| | |||||||| |||| | || |||||||| || || Sbjct 15095 CTA-TTCCTAAAATGGCATTACCTCCTTGTCATATGATGTGTCAGTTTTATGTAAG-TAA 15152 Query 172758 aaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTACCT 172817 | | ||| ||||| | |||||||||||| ||| | ||||| || || || Sbjct 15153 TGGTGA--GTTATCATGTCAAATGTATCAAAGATCATGCGATATGGGATTAGGCGTTCCA 15210 Query 172818 TATAATATTGGATTTTATTCATTTTTAATACTTGTGTTAA--GTAAATGGTGC-AATTTA 172874 | |||||| | || ||| ||||| || | | | |||| | ||| | | ||| Sbjct 15211 TTTAATATAGCATCTTACTCATTATTGA---CTATTTTAATCGCTCATGTTACTGGGTTA 15267 Query 172875 ACTCCAGGAAAGTTTATTCATACTTTTGGAGATGTTCACGTGTATTCAAATCATGTTGAA 172934 | ||||| ||||| | ||| | ||| ||| ||| || ||| || || ||||| Sbjct 15268 AAACCAGGTGAGTTTGTACATGTTACTGGTGATACTCATGTTTATAATAACCACATTGAA 15327 Query 172935 CCTTTAAAGGTTCAATTAAAAAGAAAACCATATACTTTTCCAAATGT 172981 || || || | |||||||| ||||| || ||| |||| ||||| || Sbjct 15328 CCATTGAAAGAACAATTAAAGAGAAATCCTTATCCTTTCCCAAAAGT 15374 >seq788 Length=386197 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/133 (75%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 194272 ATGGCTCAAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACT 194331 |||| ||||||||| ||| |||||||| |||| ||| ||||||||||| ||||| | Sbjct 255107 ATGG-TCAAAAAGGTACTGTTGGTATGACTTATAGACAGGAAGATATGCCGTTTACTCGT 255049 Query 194332 TCAGGTATGGTACCAGATATTATTATCAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 |||||| ||| |||||||| | |||||| || |||||| || | ||||| ||| Sbjct 255048 CAAGGTATTACACCTGATATTATGGTTAATCCACATGCTATTCCATCGCGTATGACTATT 254989 Query 194392 AATCAAATTATTG 194404 |||| | |||| Sbjct 254988 GGTCAATTAATTG 254976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632478151938240