Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq181 123 2e-23 seq1421 120 3e-22 seq207 107 2e-18 >seq181 Length=610132 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| || || || ||||||||||| || || || ||| | | Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || ||||| |||||||| || ||||| ||||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAA-ATTCAAGATAAAGAAGGTATTCCTCCAGATCA 522424 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 |||| | |||||||| || || || || | || ||| |||| | ||| ||||| Sbjct 522425 ACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAA--CTCTCAGTGATTAC 522482 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| || ||||| || |||| || ||||| ||||| | || || Sbjct 522483 AACATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522532 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| || || || ||||||||||| || || || ||| | | Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || ||||| |||||||| || ||||| ||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAA-ATTCAAGATAAAGAAGGTATTCCTCCAGATCA 522652 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 |||| | |||||||| || || || || | || ||| |||| | ||| ||||| Sbjct 522653 ACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAA--CTCTCAGTGATTAC 522710 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| || ||||| || |||| || ||||| ||||| | || || Sbjct 522711 AACATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522760 >seq1421 Length=125447 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 |||||||| ||||| || || |||||| | | || ||| | || | ||||| ||| Sbjct 52124 GGTAAAACAATTACACTTGATGTAGAACCATCAGATACAATTGATAACGTAAAGGCTAAG 52183 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 |||||||| |||||||| || || || ||||||||| | ||||| ||||| || ||||| Sbjct 52184 ATCCAAGATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAA 52243 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 | || ||| |||| | || ||||| ||||| ||||| ||||| ||||| || || Sbjct 52244 TTAGAAGATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTA 52303 Query 24911 GTGTTGCGATT 24921 || || |||| Sbjct 52304 GTCTTAAGATT 52314 >seq207 Length=264058 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACC-GACACAGTAGAAACGGTAAAACAAAA 24789 ||||| || || || | || || || |||| | || ||| | || | ||||| || Sbjct 251545 GGTAAGACCATCACCTTAGATGTCGA-GCCATCAGATACAATTGATAACGTAAAGGCTAA 251487 Query 24790 GATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACA 24849 ||||||||| |||||||| || || || ||||||||| | ||||| || ||||| ||||| Sbjct 251486 GATCCAAGATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACA 251427 Query 24850 GCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTT 24909 | || ||| |||| | || ||||| || || ||||| ||||| ||||| ||||| Sbjct 251426 ATTAGAAGATGGTAGAACATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTT 251367 Query 24910 GGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCAAC 24945 || ||| |||| | || || | | ||| ||||| Sbjct 251366 AGTATTGAGATTAAGAGGCGGTGTTATTGAACCAAC 251331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449889456853440