Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq181 105 6e-18 seq1421 91.5 1e-13 >seq181 Length=610132 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| | || |||||||| |||||| | || || || Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | | || || || ||| || |||||||| | || |||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | || ||||| || | || |||| ||||| | ||||||||| Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| ||||||||||| || || | ||||||||| || |||| ||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGA 522761 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| | || |||||||| |||||| | || || || Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | | || || || ||| || |||||||| | || |||||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | || ||||| || | || |||| ||||| | ||||||||| Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||||||||| || || | ||||||||| || |||| || Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522532 >seq1421 Length=125447 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 || |||||||| | || |||||||||||| | |||| ||| |||||||| | || Sbjct 52190 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAA 52249 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||||||| | | ||||||||||| ||||||||||| || | || | || ||| Sbjct 52250 GATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTTA 52309 Query 110486 AGACTGCGAGGGGGA 110500 ||| | |||| ||| Sbjct 52310 AGATTAAGAGGTGGA 52324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412834314377864