Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq181 114 8e-21 seq1421 98.7 7e-16 >seq181 Length=610132 Score = 114 bits (126), Expect = 8e-21 Identities = 168/234 (72%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||| ||||||| ||| ||||| || ||||||||||| Sbjct 522533 ACCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACT 522474 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || ||||| || || || || ||||| | || |||||| | || Sbjct 522473 GAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGG 522414 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || |||||| | | || | ||| | || || |||| ||| | Sbjct 522413 AATACCTTCTTTATCTTGAATTTT-GGCCTTGACGTTGTCAATAGTATCACTTGGTTCAA 522355 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT-AGTT 33753 | |||| || || ||||| || || | ||||| |||||||| ||||| |||| Sbjct 522354 CATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCATGAGTT 522301 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | |||||| ||||||| ||| ||||| || ||||||||||| | Sbjct 522760 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522701 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || ||||| || || || || ||||| | || |||||| | || Sbjct 522700 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522641 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||| || |||||| | | || | ||| | || || |||| ||| || Sbjct 522640 ATACCTTCTTTATCTTGAATTTT-GGCCTTGACGTTGTCAATAGTATCACTTGGTTCAAC 522582 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || ||||| || || | ||||| |||||||| |||||| Sbjct 522581 ATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCATA 522533 >seq1421 Length=125447 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| || | ||| || ||||| || ||| |||||||| ||||||||||| || Sbjct 52323 CCACCTCTTAATCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGAT 52264 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| | | || || |||||||| || ||||||||||| | || |||||| | || Sbjct 52263 AATGTTCTGCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 52204 Query 33643 ACACCTTCTTTGTC 33656 | ||||||||| || Sbjct 52203 ATACCTTCTTTATC 52190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698199196160