Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq1341 89.7 2e-14 seq1167 89.7 2e-14 seq1041 89.7 2e-14 seq1024 89.7 2e-14 seq44 86.0 2e-13 >seq1341 Length=394689 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 61761 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 61817 Score = 86.0 bits (94), Expect = 2e-13 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 63832 TAGATCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACTGGTTCAATCCCGG 63888 >seq1167 Length=12398 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 10333 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 10277 Score = 86.0 bits (94), Expect = 2e-13 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 ||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 7630 TAGATCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCACTGGTTCAATCCCGG 7574 >seq1041 Length=18989 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 11394 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 11338 >seq1024 Length=361866 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 171276 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 171332 >seq44 Length=64512 Score = 86.0 bits (94), Expect = 2e-13 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 |||||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 3764 TAGCTCAGATGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 3820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849348981960