Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq181 134 1e-26 seq1421 100 2e-16 seq207 98.7 8e-16 >seq181 Length=610132 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||||||||| | |||||||| || |||||| | || ||||| | Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || |||||| || |||||||| | || |||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || |||||||||||| || |||| | | ||||||||| Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGAT 106488 || || ||||||||||| |||||||||| || || || |||| |||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGAT 522762 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||||||||| | |||||||| || |||||| | || ||||| | Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | || || |||||| || |||||||| | || |||||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || || |||||||||||| || |||| | | ||||||||| Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||||||||| |||||||||| || || || |||| || Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522532 >seq1421 Length=125447 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 || |||||||| | || ||||||||||| | |||| ||| || |||||||||||| Sbjct 52190 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAA 52249 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | ||| | ||||||||||| ||||||||||| ||||| |||||||| || Sbjct 52250 GATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTTA 52309 Query 106473 AGGTTACGAGGAGGA 106487 || ||| |||| ||| Sbjct 52310 AGATTAAGAGGTGGA 52324 >seq207 Length=264058 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 || |||||||| | || ||||||||||| | |||| || || |||||||||||| Sbjct 251479 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAA 251420 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| || ||| | |||||||| || ||||||||||| ||||| || ||||||||| Sbjct 251419 GATGGTAGAACATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTTAGTATTG 251360 Query 106473 AGGTTACGAGGAGG 106486 || ||| |||| || Sbjct 251359 AGATTAAGAGGCGG 251346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402322499888384