Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq1382 82.4 8e-11 >seq1382 Length=24816 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 144849 CCTGGTTTTAACCCGGTGCATTTAGCAATAATATGAATCAGAGCAGCGTAAGATGCAATA 144908 |||||||||||||| || | ||| || | | | ||| | ||||||||| ||| Sbjct 15275 CCTGGTTTTAACCCAGTAACATGAGCGATTAAAATAGTCAATAATGAGTAAGATGCTATA 15216 Query 144909 TTAAATGGAAGCCCTAAGAATACATCGACAGATCGTTGATACCATTGA-AGGTCCAAGAA 144967 |||||||||| ||||| | |||| |||| ||||||| |||| | | | || Sbjct 15215 TTAAATGGAACGCCTAATCCCATATCGCATGATCTTTGATACATTTGACATG----ATAA 15160 Query 144968 C---CCATTACGAACGTTGAATTGATACATCATGTGACACGGTGGAAGAGCCATCTTCGG 145024 | ||||||| || | || ||| ||||||| ||||| || || | ||||| || || Sbjct 15159 CTCACCATTACTTACATAAAACTGACACATCATATGACAAGGAGGTAATGCCATTTTAGG 15100 Query 145025 AATATCAACTGGATTCCATGCTGT 145048 |||| || |||||||| ||||| Sbjct 15099 AATAGCACTAGGATTCCAAGCTGT 15076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544953336166080