Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq1382 87.8 2e-12 >seq1382 Length=24816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 256/391 (65%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 31155 TTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCT 31214 ||| ||||| || ||||| ||| | ||| ||| || ||||| || || |||||| | Sbjct 15327 TTCAATGTGGTTATTATAAACATGAGTATCACCAGTAACATGTACAAACTCACCTGGTTT 15268 Query 31215 TAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGG 31274 || || | | || || | | | ||| | | ||| ||||| || ||||| Sbjct 15267 TAACCCAGTAACATGAGCGATTAAAATAGTCAATAATGAGTAAGATGCTATATTAAATGG 15208 Query 31275 TACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGT 31334 || || ||||||| |||| |||| |||||| | ||| || | ||| | | Sbjct 15207 AACGCCTAATCCCATATCGCATGATCTTTGATACATTTGACATGATAACTCACCATTACT 15148 Query 31335 CACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCG-ACG- 31392 || ||||| ||| | | || ||||||||| || || ||||||| | || || | || Sbjct 15147 TACATAAAACTGACACATCATATGACAAGGAGGTAATGCCATTTTA--GGAATAGCACTA 15090 Query 31393 GGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGATCACGCTTAATCTCTTCTATC 31452 ||||||||||| | | || | | ||| ||||||| ||||| |||||| Sbjct 15089 GGATTCCAAGCTGTCAATATAATTCTACGATCCGTTGGATTGTTTTTAATTGTTTCTATT 15030 Query 31453 ACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTACTATCACATCCCTTGTAGGCT 31512 || | | | ||| || | ||||| | ||||||| | ||| | | || || | Sbjct 15029 ACTTCCTTCAATTGGTCAACTCCTTTATTAGTATAATCAGTATTGAAGTCTTTATATTCA 14970 Query 31513 GCACCGAAATGTCGCCATTGAAACCCATAAA 31543 ||||| ||||| ||||||||||| ||||||| Sbjct 14969 GCACCAAAATGACGCCATTGAAATCCATAAA 14939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513008314381440