Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1230 203 2e-47 >seq1230 Length=864525 Score = 203 bits (224), Expect = 2e-47 Identities = 348/500 (70%), Gaps = 9/500 (2%) Strand=Plus/Minus Query 64890 ATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAA 64949 ||||||| |||||||| | | ||||||| ||| ||||| || || | |||| |||| Sbjct 413016 ATCCTGTACCAATACCTTCACATCCATTTACTAATATCATTGGTATTACTGGTACATACC 412957 Query 64950 AGATAGGCTCAACAATGAGACCATCATCATCCAAATACTT-CAAAATGGCATCATCCTCT 65008 | ||| |||||| | ||||||||||| | ||| || ||| | |||||||| ||| Sbjct 412956 ATTCAGGTTCAACACTTTGACCATCATCAGTTAGATAGTTTCAATACAGCATCATCATCT 412897 Query 65009 TTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGA--TG 65066 | ||||| | | | || || | ||| | ||||||||||| | ||| || Sbjct 412896 GGATGGAATATTAATCTTGCGATCTTCTCTAATCGCGTATAAATATAACGA--GGACTTG 412839 Query 65067 CGTGGTCTTGTCCAGTTCGT---CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAA 65123 | |||| ||| | | | ||| ||||| ||||| ||| ||||||||||| Sbjct 412838 CACTATCTTTACCACCTAATAATCTTGTACCAAATTGACCTGATGGATATAATAAATTAA 412779 Query 65124 TATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATT-TAAACTCGCT 65182 |||| || ||| | ||| ||||| |||||||| | || | ||| |||||| || Sbjct 412778 TATTATTACTACCTACAAAGTTCTGTGCCATTCCTACTATAGTACCATGCTAAACTAGCA 412719 Query 65183 TCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATT 65242 ||||| |||||||| | | ||| ||||||||||| ||| | |||||||||||||| ||| Sbjct 412718 TCACCATGATGATAAGCAGCATGCTCAGAGACATAACCAGTTAATTGAGCAACTTTAATT 412659 Query 65243 TCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTTTCAAT 65302 || | ||||||| |||||||||| | | |||||||||| | ||| ||| Sbjct 412658 TCAGACTTTAAATTACGTTTAAATGCACCAAATAATATTTTCCTTTGCGCTGGTTTAAAT 412599 Query 65303 CCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCT 65362 ||||| | || ||||||| ||| | |||||| | ||||| || || |||||| Sbjct 412598 CCATCTACAAAGCTAGGAATTGATCTACTATTATCATAGATAGAGAATTGAATTAATTCT 412539 Query 65363 TTGTTAATAAATTCTTCATA 65382 || |||||||| | ||||| Sbjct 412538 TTATTAATAAACTTATCATA 412519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235675840837200