Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq181 134 2e-26 seq1421 100 3e-16 >seq181 Length=610132 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| ||||| |||||||| ||||| ||||| || || Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| |||||||| || || || || ||||||||||| || Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || |||| | | || || || || || Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | || || ||||| ||| | ||| |||| || Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTT 522517 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || ||||| ||||| |||||||| ||||| ||||| || || Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| |||||||| || || || || ||||||||||| || Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || |||| | | || || || || || Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | || || ||||| ||| | ||| |||| || Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTT 522745 >seq1421 Length=125447 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || || || ||||| ||||| || || || |||| |||| || | |||||||| Sbjct 52124 GGTAAAACAATTACACTTGATGTAGAACCATCAGATACAATTGATAACGTAAAGGCTAAG 52183 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || || || || || || ||||| ||||| || || | | |||||||||||||| ||| Sbjct 52184 ATCCAAGATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAA 52243 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 | || |||| | || || | || || || ||||||| |||||||| |||||| || Sbjct 52244 TTAGAAGATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTA 52303 Query 27613 GTCTT 27617 ||||| Sbjct 52304 GTCTT 52308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570300077381760