Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq181 129 5e-25 seq1421 87.8 2e-12 >seq181 Length=610132 Score = 129 bits (142), Expect = 5e-25 Identities = 177/246 (72%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 26972 TTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCT 27031 || ||| ||| || | ||||| || ||||| ||||| || || ||||| ||||||| || Sbjct 522291 TTATAACTTAAACTC-ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCT 522349 Query 27032 TGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGG 27091 ||| || ||||| || | ||||| | ||||| ||||||||||| |||||||| Sbjct 522350 TGATGTTGAACCAAGTGATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGG 522409 Query 27092 CATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGAC 27151 || || || |||||||| | || || | ||| || || ||||| ||||| || || Sbjct 522410 TATTCCTCCAGATCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAAC 522469 Query 27152 CGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGG 27211 | |||||||||||||| || || || || |||||||| || || | ||| | || Sbjct 522470 TCTCAGTGATTACAACATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGG 522529 Query 27212 TGGCAT 27217 ||| || Sbjct 522530 TGGTAT 522535 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || ||||| ||||||| ||||| || ||||| Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||||||||||| |||||||| || || || |||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | ||| || || ||||| ||||| || || | ||||||||| Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || || || || |||||||| || || | ||| | ||||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522760 >seq1421 Length=125447 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 ||||| ||||| || ||||| || || | ||||| | || || || || ||||| Sbjct 52133 ATTACACTTGATGTAGAACCATCAGATACAATTGATAACGTAAAGGCTAAGATCCAAGAT 52192 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || ||||| |||||||| | || || | || || |||||||| ||||| Sbjct 52193 AAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGAT 52252 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 | || | || ||||||||||| ||||| || || || | ||||| || || Sbjct 52253 GGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTT 52308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434910527976960