Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1382 181 9e-41 seq182 96.9 3e-15 >seq1382 Length=24816 Score = 181 bits (200), Expect = 9e-41 Identities = 401/598 (67%), Gaps = 20/598 (3%) Strand=Plus/Minus Query 118464 TTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTC 118523 ||||| ||| |||||||| || |||| ||||||| ||| ||| | ||||| || || Sbjct 15336 TTTCAATGGTTCAATGTGGTTATTATAAACATGAGTATCACCAGTAACATGTACAAACTC 15277 Query 118524 ACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTAC 118583 ||| ||| | | ||| || | ||||| || | ||||| || ||| |||| Sbjct 15276 ACCTGGTTTTAACCCAGTAACATGAGCGATTAAAATAGTCAATAATGAGTAAGATGCTAT 15217 Query 118584 ATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTC 118643 |||||| ||||| || | ||||| || |||||| || |||| ||| || || | ||| Sbjct 15216 ATTAAATGGAACGCCTAATCCCATATCGCATGATCTTTGATACATTTGACATGATAACTC 15157 Query 118644 CCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT----GGAAC 118699 || || ||||||||||||| || || ||||| ||||| | |||| |||| Sbjct 15156 ACCATTACTTACATAAAACTGACACATCATATGACAAGGAGGTAATGCCATTTTAGGAAT 15097 Query 118700 T-CAGTTGGGCAGGATTCCAGGCTGTTAAAACATGCCT----TCTGCTATATGGTTCT-A 118753 || | ||||||||| ||||| || | | || || | | || ||| | | Sbjct 15096 AGCACT-----AGGATTCCAAGCTGTCAATATAATTCTACGATCCGTTGGATTGTTTTTA 15042 Query 118754 CCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGACT 118813 ||| | | |||| | || | || || || || || |||||| | || | Sbjct 15041 ATTGTTT-----CTATTACTTCCTTCAATTGGTCAACTCCTTTATTAGTATAATCAGTAT 14987 Query 118814 CGCATCCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGAT 118873 | | |||||||||| || |||||| | ||||||||| |||||||| || || | || Sbjct 14986 TGAAGTCTTTATATTCAGCACCAAAATGACGCCATTGAAATCCATAAACTGGACCTAAAT 14927 Query 118874 CTCCCTGGGACCTAAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCCATTAGCAT 118933 | ||| ||| | |||||||| ||| | |||||| |||| ||||| ||| Sbjct 14926 CACCCACTTCTCTATCCTTTAAACCTAATTTATCAAGGAATTCTCTTGAACCATTGCCAT 14867 Query 118934 TCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACC 118993 ||||||| || |||| ||| |||| ||| | |||||| |||| | | ||||| Sbjct 14866 CCCAAATATGAATGTTCTTTTCTGCGAGATGATTGGCATTTGTATCACCATTAATAAACC 14807 Query 118994 AAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 | | | |||||| |||| ||||||||||| ||| |||||||||| || | ||| || Sbjct 14806 ATAATAATTCCTCAGCAACTCCTCTCCAAAATACTCTTTTTGTTGTTAATAATGGCAA 14749 >seq182 Length=52265 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118464 TTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTC 118523 ||||| ||| |||||||| || |||| ||||||| ||| ||| | ||||| || || Sbjct 217 TTTCAATGGTTCAATGTGGTTATTATAAACATGAGTATCACCAGTAACATGTACAAACTC 158 Query 118524 ACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTAC 118583 ||| ||| | | ||| || | ||||| || | ||||| || ||| |||| Sbjct 157 ACCTGGTTTTAACCCAGTAACATGAGCGATTAAAATAGTCAATAATGAGTAAGATGCTAT 98 Query 118584 ATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTC 118643 |||||| ||||| || | ||||| || |||||| || |||| ||| || || | ||| Sbjct 97 ATTAAATGGAACGCCTAATCCCATATCGCATGATCTTTGATACATTTGACATGATAACTC 38 Query 118644 CCCGTTTGCAACATAAAACTGACTTATGATGTGACA 118679 || || ||||||||||||| || || ||||| Sbjct 37 ACCATTACTTACATAAAACTGACACATCATATGACA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414469485520672