Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1421 93.3 1e-13 seq207 87.8 4e-12 >seq1421 Length=125447 Score = 93.3 bits (102), Expect = 1e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||||| ||||| |||||||||||||| ||||| | | || || || Sbjct 52312 TCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGATAATGTTCTGCC 52253 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || || || | | |||||| || || |||| ||||| || Sbjct 52252 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 52193 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || |||||||| || ||||| || || || || || ||| || || || || || Sbjct 52192 ATCTTGGATCTTAGCCTTTACGTTATCAATTGTATCTGATGGTTCTACATCAAGTGTAAT 52133 Query 211079 CGTCTTTCC 211087 || || || Sbjct 52132 TGTTTTACC 52124 >seq207 Length=264058 Score = 87.8 bits (96), Expect = 4e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || ||||||||||| || ||||| | | || || |||||||| | || Sbjct 251369 GTGAAGTGTTGATTCTTTTTGGATATTGTAATCAGATAATGTTCTACCATCTTCTAATTG 251428 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| || | | |||||| || || |||| ||||| || || |||||||| Sbjct 251429 TTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATCTT 251488 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || ||||| || || || || || || || || | ||||| ||||| ||| Sbjct 251489 AGCCTTTACGTTATCAATTGTATCTGATGGCTCGACATCTAAGGTGATGGTCTTACCC 251546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159130494832520