Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq181 129 4e-25 seq1421 104 2e-17 seq207 84.2 1e-11 >seq181 Length=610132 Score = 129 bits (142), Expect = 4e-25 Identities = 173/240 (72%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 23601 ATTACTTAAA---ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 || ||||||| ||||| || || ||||||||||| || || ||||| || || || || Sbjct 522293 ATAACTTAAACTCATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGA 522352 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 ||||| | | || ||| |||| | | || |||||| || ||||||||| | Sbjct 522353 TGTTGAACCAAGTGATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTAT 522412 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || ||||||||||| | || || || || || || ||| | ||||| | | ||| | Sbjct 522413 TCCTCCAGATCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCT 522472 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | ||||||||||| || ||||| || || ||||||||||| ||||| ||| |||| || Sbjct 522473 CAGTGATTACAACATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522532 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||||| || || ||||| || || || || ||||| | | Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | || |||||| || ||||||||| | || ||||||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || || || || || ||| | ||||| | | ||| | | ||||||||| Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGAT 23839 || || ||||| || || ||||||||||| ||||| ||| |||| |||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGAT 522762 >seq1421 Length=125447 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 || ||||||||| | || ||||||||||| | || || ||||| || |||||| | ||| Sbjct 52190 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAA 52249 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | | || ||| ||||||||||| |||||||| |||||| | |||||||| ||| Sbjct 52250 GATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTTA 52309 Query 23824 AGGTTGCGAGGAGGA 23838 || || |||| ||| Sbjct 52310 AGATTAAGAGGTGGA 52324 >seq207 Length=264058 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 || ||||||||| | || ||||||||||| | || || || ||||| |||||| | ||| Sbjct 251479 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAA 251420 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | | || ||| |||||||| || |||||||| || ||| | || ||||| || Sbjct 251419 GATGGTAGAACATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTTAGTATTG 251360 Query 23824 AGGTTGCGAGGAGG 23837 || || |||| || Sbjct 251359 AGATTAAGAGGCGG 251346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003634975584