Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq181 116 3e-21 seq207 86.0 5e-12 seq1421 84.2 2e-11 >seq181 Length=610132 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| | || |||||||| |||||| | || ||||| || Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | | || || |||||| || |||||||| |||| |||||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | || || || ||||| |||||| || |||| | ||||| || Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTT 111311 || || ||||||||||| ||||||||||||| Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTT 522517 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| | || |||||||| |||||| | || ||||| || Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | | || || |||||| || |||||||| |||| |||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | || || || ||||| |||||| || |||| | ||||| || Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTT 111311 || || ||||||||||| ||||||||||||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTT 522745 >seq207 Length=264058 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 || |||||||| |||| ||||||||||| | |||| || || |||||||| ||| Sbjct 251479 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAA 251420 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| || ||| | | ||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct 251419 GATGGTAGAACATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTTAGTATTG 251360 >seq1421 Length=125447 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 || |||||||| |||| ||||||||||| | |||| ||| || |||||||| ||| Sbjct 52190 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAA 52249 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111311 ||| | ||| | | ||||| || || ||||||||||| ||||| |||||||| || Sbjct 52250 GATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTT 52308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421803756086848