Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq392 91.5 3e-13 >seq392 Length=40939 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 61287 TTTGTGACTCGTAAAATTACGAAGGCGGTT--GCAAATATTTTTAACGGTGTCGAAAAAT 61344 |||||||| ||||| ||||| | |||| |||| ||| || |||| |||| || | Sbjct 32268 TTTGTGACCCGTAAGATTACT--GCCGGTATCGCAAGAATTGTTTGCGGTCTCGACAATT 32325 Query 61345 GCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCG 61404 |||| || || || ||||| || || || | ||||||||| ||||| ||||| | | Sbjct 32326 GCATCTACCTTGGTAACATCGATTCGAAGCGCGATTGGGGACATGCGCGTGATTACGTGG 32385 Query 61405 AGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGG 61462 | | |||||| |||||||| ||||| || |||||||||||| | || || || Sbjct 32386 AAGGAATGTGGAGAATGTTGCAGCAAGACGAACCCGATGACTACGTTTTGGCTACGGG 32443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057809104846370