Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq55 363 2e-95 >seq55 Length=197180 Score = 363 bits (402), Expect = 2e-95 Identities = 535/751 (71%), Gaps = 34/751 (5%) Strand=Plus/Plus Query 145537 TAGACCGCCATCTCCATGGGGA--TGGCCGCGTGGGGGTGGTAGCCCTCCA-GCGCAAAG 145593 ||||||||||||| ||||| | | |||| ||||||||||||||| ||| | ||| | Sbjct 129697 TAGACCGCCATCTTCATGGCCACCTTGCCG--TGGGGGTGGTAGCCCACCACGTGCAG-G 129753 Query 145594 TCCTCCGCCCTG----AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCT-------GA 145642 || || | ||||| || || || ||| || | ||||| | || Sbjct 129754 TC----GCTGTAGGAAAAGTCGTCGATCGTCTTGTCCCTCC-CGGGATCGTCGATGAAGA 129808 Query 145643 GCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGA 145702 || ||||||||| ||||||| || |||||| ||| || ||||| |||||||||| Sbjct 129809 GCTTGGGAAAGGCCCGGGGGGCCCGCTCCAGCTGCTCCTTGAGCGGCTCGACGTGGTTGA 129868 Query 145703 GGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGT 145762 |||||||||| ||||||||||| ||||| | |||||||||| | | || || | || Sbjct 129869 GGTAGACGTGGGCGTCCCCCAGCGTGTGGACCAGCTCCCCGGGCTTGCGCCCGGTCACGT 129928 Query 145763 GGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCA 145822 |||| || | || ||||| || | ||||||||| ||||||||||| |||||||| |||| Sbjct 129929 GGGCCACGAGGTGCGTCAGGAGCGCGTAGCTGGCAATGTTGAAGGGGACCCCCAGGCCCA 129988 Query 145823 TGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG------CCACGTAGA 145876 |||| |||| |||||||||| |||||| || ||| || | | ||||||| Sbjct 129989 TGTCGGCCGACCGCTGGTACATGTGGCAGCTGACCTCGTCGGTGGTCGTGTCGACGTAGA 130048 Query 145877 ACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGG 145936 |||||||||| ||||||||||| || |||||||| || |||| | | |||||||||| Sbjct 130049 ACTGGCACAGCAGGTGGCAGGGGGGGAGGGCCATCTCGTCCAGGGCGGAGGGGTTCCAGG 130108 Query 145937 CGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGA 145996 || | | || || || | | ||| ||||| |||||||| | || || | Sbjct 130109 CGCTCATGAGGATCCGGCGGTCCTCCGGGTTGTGCTTGATCTTGTCGATGCACTCGGCCA 130168 Query 145997 GCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGT 146056 ||||||| ||||||||||| ||| || || | |||| |||| |||| || |||| Sbjct 130169 GCTGGTCGACGCCCTGCCCGGTGTAGTCGGTGTGCATGTCCTTGTACTCGGCGCCAAAGT 130228 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 ||| |||||| || ||||||||||| |||||||| || ||| | ||| || |||||| Sbjct 130229 GCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCGCCCTCCTCTCGGTGTCCSAGCCCG- 130287 Query 146117 CCCGGG---CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGG 146173 |||| ||||||| ||| ||| |||| ||||||||||| || | | | | Sbjct 130288 --CGGGCCTCGAGGAATTCCTTGGAGGCGTTTCCGTCCCAGATCCCGATGTTCTTTTCCT 130345 Query 146174 AGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCC 146233 ||| |||| || ||| || |||||||||||| || || ||| ||| |||| Sbjct 130346 TGAGGAGGTTGGCGTTGGTGCTGCCGGAGATGAACCAGAGGAGTTCCTCGGCGACTCCCC 130405 Query 146234 TCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 |||||||| |||| ||||||||||| || Sbjct 130406 TCCAGAAGGTTTTCTTCGTGGTCAGCAGCGG 130436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590068693819960