Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq157 95.1 8e-15 >seq157 Length=115544 Score = 95.1 bits (104), Expect = 8e-15 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 75059 CCCGGGCCTCTACGGCAGGGTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGA 75118 |||||| | ||||| | || | || ||| |||| || || ||| | || || || || Sbjct 5373 CCCGGGAC-CTACGCCCGGATCGCCCCCCGGTCGGGACTCGCCGTCAAGAAGGGGATCGA 5315 Query 75119 CGTCGGTGCCGGGGTGGTGGACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAA 75178 | ||| ||||||||||| ||| | |||||| |||| | |||||||| | || || || Sbjct 5314 CTGCGGGGCCGGGGTGGTCGACGCGGACTACCGGGGGCCCGTCGGCGTCGTCCTCTTCAA 5255 Query 75179 CTTTGGGTGCGACCCCTTTCGGGTCAAGAGGGGCGACAGGATAGCCCAGCTCGTGCTCGA 75238 | | || ||| ||||| |||| | | ||| ||| |||| ||||||||| | ||||| Sbjct 5254 CCTCGGCACCGAGGACTTTCAGGTCCAAAAGGGGGACCGGATCGCCCAGCTCATCCTCGA 5195 Query 75239 GA 75240 || Sbjct 5194 GA 5193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338760262563096