Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq30 109 3e-19 >seq30 Length=255409 Score = 109 bits (120), Expect = 3e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 65916 CCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGG 65975 || ||||||||| | | ||||||| || |||||| ||||| || |||| ||| ||| Sbjct 78378 CCGACCGGCTCGCTGACCCTGGACGTGGCGCTCGGCGGGGGGGGATACCCGAAGGGGCGG 78319 Query 65976 GTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTG 66035 || |||||||||||||| || ||||| || |||||| | || || |||||||||| | Sbjct 78318 GTGGTGGAGATCTACGGCCCCGAGTCCTCCGGGAAGACGACCCTGGCCCTCCACGCGATC 78259 Query 66036 GCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGAC 66095 ||| | ||||||| || || | || |||| | |||||||| || | ||||| Sbjct 78258 GCCGAGTGCCAGAAGAGGGGCGGGACGGCAGCCTTTGTGGACGCCGAGCACGCCCTCGAT 78199 Query 66096 CCTGAGTACG 66105 || | |||| Sbjct 78198 CCCGTCTACG 78189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242467152336308