Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq386 87.8 1e-12 >seq386 Length=39556 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||| |||||||| || ||| | | | || ||||| ||||| || ||||| Sbjct 11396 TCCTTTTGGATATTGTAGTCGCTTAGGGTCCTTCCATCTTCCAATTGCTTTCCAGCAAAA 11337 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||| ||||||| |||| || |||||||| ||||| || ||| Sbjct 11336 ATCAATCTCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTG 11277 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| || |||| ||| || || || || |||||||||||||| Sbjct 11276 TCAATGGTGTCCGAAGGCTCGACATCCAACGTGATTGTCTTGCCGGTCAAAGTTTTTACG 11217 Query 48756 AAAATCTG 48763 |||||||| Sbjct 11216 AAAATCTG 11209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932497697977