Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq217 693 0.0 >seq217 Length=78499 Score = 693 bits (768), Expect = 0.0 Identities = 731/963 (76%), Gaps = 0/963 (0%) Strand=Plus/Plus Query 150864 ACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAA 150923 ||||||| || || |||||||||||||| | ||| | |||||||| | || ||| Sbjct 40606 ACAACCGCCTTTACATCGGTTGGTTCGGTACTATCATGTTCCCAACTCTTCTTGCCGCAG 40665 Query 150924 CCATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTG 150983 | |||||||| ||||| || || || || ||||||||||| || || ||||| | Sbjct 40666 CATCATGCTTCATTACTGCATTTATTGCCGCACCTCCTGTGGACATTGACGGAATCCGCG 40725 Query 150984 AACCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTT 151043 |||| ||||| || ||||| | |||||||| ||||||||| | || |||| | |||| Sbjct 40726 AACCTGTTGCCGGATCTCTTCTTTACGGTAATAACATCATCACCGGGTCTGTCATCCCTT 40785 Query 151044 CTTCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAAT 151103 ||| ||||| ||||| |||||||||| ||| | |||||||| ||||| | || |||| Sbjct 40786 CTTMCAACGCAATCGGGATGCACTTCTACCCCGTTTGGGAAGCTGCCTCCATGGACGAAT 40845 Query 151104 GGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATG 151163 || | |||||||| || || | |||| | ||||| | |||||||| | || | | Sbjct 40846 GGTTGTACAACGGAGGACCCTACCAATTGGTTGTGATGCACTTCCTTCTCGGAGTTGCTT 40905 Query 151164 CTTACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGCG 151223 | |||||||| |||||||||||||| || || ||| | || |||||||| ||||| | | Sbjct 40906 CGTACATGGGCCGTGAGTGGGAACTTTCGTATCGCCTCGGAATGCGTCCTTGGATTTTTG 40965 Query 151224 TTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTC 151283 |||||| ||| || || ||||| || || | || || |||||| ||| || | || | Sbjct 40966 TTGCATTCTCCGCACCTGTTGCAGCCGCCACCGCTGTCTTCCTCACCTACCCCATTGGGC 41025 Query 151284 AAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTG 151343 |||| |||||| |||| ||||| || ||||| || || ||||||| |||| | | Sbjct 41026 AAGGAAGTTTCTCAGATGGCATGCCTCTTGGTATCAGCGGAACCTTCAACTTCATGTTGG 41085 Query 151344 TCTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTG 151403 ||||||| || ||||||||||| || |||||||| | |||||| || || || |||| Sbjct 41086 TCTTCCAGGCCGAGCACAACATCCTTATGCACCCGCTTCATATGGCCGGAGTTGCAGGTG 41145 Query 151404 TCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTC 151463 ||||||| ||||| | ||||| || |||||||| ||||| |||||||| || || | | Sbjct 41146 TCTTCGGAGGATCTTTGTTCTCCGCCATGCACGGGTCTCTTGTTACTTCCTCTTTGATCC 41205 Query 151464 GTGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGA 151523 |||| |||||||||||||| ||| || | || |||||||| || || ||||| || | Sbjct 41206 GTGAAACCACCGAAAACGAATCCACCAATAACGGATACAAGTTTGGCCAGGAAGAGGAAA 41265 Query 151524 CCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCT 151583 |||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| || | Sbjct 41266 CCTACAACATTGTCGCCGCTCACGGGTACTTTGGACGTCTCATCTTCCAATACGCGTCGT 41325 Query 151584 TCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGT 151643 ||||||| || ||| | || ||||||||| | || |||||||| | |||||||||| Sbjct 41326 TCAACAACTCGCGTGCTCTTCACTTCTTCTTAGCTCTCTGGCCTGTATTGGGTATCTGGT 41385 Query 151644 TCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 151703 ||| || | |||||| ||||||||| |||||||| ||||| ||||||||||||||| Sbjct 41386 GCACCGCCATGGGTGTCTCCACCATGGCCTTCAACCTCAACGGATTCAACTTCAACCAGG 41445 Query 151704 CCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAG 151763 | |||| || |||| ||| | ||||||||||| ||| | | |||||||| | Sbjct 41446 CTGTCATCGACTCCGAGGGACGTGTCATCAACACCTGGGCCGACATAATCAACCGTGCCG 41505 Query 151764 GTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 151823 ||| || ||||| || |||||||| ||||||||||| ||||| ||||| || | ||| Sbjct 41506 ATCTTGGAATGGAGGTCATGCACGAACGTAATGCTCATAACTTTCCTCTTGATTTGGCTT 41565 Query 151824 CTG 151826 ||| Sbjct 41566 CTG 41568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549614849562280