Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq281 93.3 2e-13 >seq281 Length=72477 Score = 93.3 bits (102), Expect = 2e-13 Identities = 117/160 (73%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 309685 TCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCA 309744 || || | || |||||| |||||||| || |||||||| |||| || | | ||||||| Sbjct 10808 TCGATAAGCTGGGCGATTGTCATACGCGATGGAATGGCGTGAGGATTAACAATAATGTCA 10749 Query 309745 GGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAATA 309804 || ||| || | | |||||||||||||||||| | | ||| |||||| Sbjct 10748 GGCACCATACCTTCCACGG---TGAAAGGCATATCTTCTTGACGATAGGTCATACCAATG 10692 Query 309805 GTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAA 309844 || ||||||||| |||| | ||| |||||||| || |||| Sbjct 10691 GTACCCTTTTGACCGTGACGGGAGGCAAACTTATCCCCAA 10652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951946914370472