Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq217 610 2e-170 >seq217 Length=78499 Score = 610 bits (676), Expect = 2e-170 Identities = 720/972 (74%), Gaps = 2/972 (0%) Strand=Plus/Plus Query 19511 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 19570 |||||| |||| ||| ||||||| ||||| | || ||||| || || | ||| | Sbjct 40587 AACTGGATCACAAGCACCGACAACCGCCTTTACATCGGTTGGTTCGGTACTATCATGTTC 40646 Query 19571 CCGTGTCTCCTTGCAGCCACCATC-TGCTTCATTATTGCATTCATTGCGGCTCCACCAGT 19629 || ||| ||||| || | |||| |||||||||| |||||| ||||| || || || || Sbjct 40647 CCAACTCTTCTTGCCGC-AGCATCATGCTTCATTACTGCATTTATTGCCGCACCTCCTGT 40705 Query 19630 TGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCAT 19689 |||||||| || ||||||||||| || |||| |||||||| || || |||||||| Sbjct 40706 GGACATTGACGGAATCCGCGAACCTGTTGCCGGATCTCTTCTTTACGGTAATAACATCAT 40765 Query 19690 ATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGA 19749 | || | ||| | || ||| || ||||| | ||||||||||| ||||||| Sbjct 40766 CACCGGGTCTGTCATCCCTTCTTMCAACGCAATCGGGATGCACTTCTACCCCGTTTGGGA 40825 Query 19750 AGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCA 19809 |||| || | || |||||| | |||||||| ||||| | |||| | || || | || Sbjct 40826 AGCTGCCTCCATGGACGAATGGTTGTACAACGGAGGACCCTACCAATTGGTTGTGATGCA 40885 Query 19810 CTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGG 19869 |||||| | || | | | |||||||| || |||||||||||| ||||| || || Sbjct 40886 CTTCCTTCTCGGAGTTGCTTCGTACATGGGCCGTGAGTGGGAACTTTCGTATCGCCTCGG 40945 Query 19870 AATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTT 19929 |||| | |||||||||| |||||| | ||| || || |||||||||||| | || ||||| Sbjct 40946 AATGCGTCCTTGGATTTTTGTTGCATTCTCCGCACCTGTTGCAGCCGCCACCGCTGTCTT 41005 Query 19930 TCTCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGG 19989 ||| |||||| |||| || || || ||||| |||| |||||| | |||||| || Sbjct 41006 CCTCACCTACCCCATTGGGCAAGGAAGTTTCTCAGATGGCATGCCTCTTGGTATCAGCGG 41065 Query 19990 TACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCA 20049 || ||||||| ||||||||| ||||| ||||| || ||||| || ||||||||| | || Sbjct 41066 AACCTTCAACTTCATGTTGGTCTTCCAGGCCGAGCACAACATCCTTATGCACCCGCTTCA 41125 Query 20050 CATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCT 20109 ||| || || || ||||| ||||| || || | ||| || |||||||| || || Sbjct 41126 TATGGCCGGAGTTGCAGGTGTCTTCGGAGGATCTTTGTTCTCCGCCATGCACGGGTCTCT 41185 Query 20110 TGTTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAA 20169 |||||| ||||| | | ||||| || || ||| | ||| || | || ||||| Sbjct 41186 TGTTACTTCCTCTTTGATCCGTGAAACCACCGAAAACGAATCCACCAATAACGGATACAA 41245 Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229 |||||| || ||||| || ||||| ||||| || |||||||| || |||||||||||| | Sbjct 41246 GTTTGGCCAGGAAGAGGAAACCTACAACATTGTCGCCGCTCACGGGTACTTTGGACGTCT 41305 Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289 |||||||||||||| || |||||||| ||| |||| ||||||||| | ||| ||| Sbjct 41306 CATCTTCCAATACGCGTCGTTCAACAACTCGCGTGCTCTTCACTTCTTCTTAGCTCTCTG 41365 Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349 ||| || | || || |||| | | ||| |||| || || || ||||| || || || || Sbjct 41366 GCCTGTATTGGGTATCTGGTGCACCGCCATGGGTGTCTCCACCATGGCCTTCAACCTCAA 41425 Query 20350 CGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGC 20409 ||| |||||||| |||||| | | ||||| | | || |||||||| | || ||||| Sbjct 41426 CGGATTCAACTTCAACCAGGCTGTCATCGACTCCGAGGGACGTGTCATCAACACCTGGGC 41485 Query 20410 TGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAA 20469 ||||| |||| ||||| |||| || | ||||| ||||| ||||| ||||||||||| Sbjct 41486 CGACATAATCAACCGTGCCGATCTTGGAATGGAGGTCATGCACGAACGTAATGCTCATAA 41545 Query 20470 CTTCCCACTTGA 20481 ||| || ||||| Sbjct 41546 CTTTCCTCTTGA 41557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148826857691142