Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq456 98.7 9e-16 seq386 93.3 4e-14 >seq456 Length=31050 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||| || ||| || | || |||| ||||| || ||||| Sbjct 6823 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAATTGCTTTCCGGCAAAG 6764 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GT 35664 || | ||||||||||| | ||||| | ||||||||| |||| ||| || || || Sbjct 6763 ATGAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGGATC--TTGGTTTTGACGT 6706 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||| |||| ||||| || || || |||| || || | Sbjct 6705 TGTCGATGGTGTCGGACGGTTCCACGTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTA 6646 Query 35724 CAAATATCTG 35733 |||| ||||| Sbjct 6645 CAAAAATCTG 6636 >seq386 Length=39556 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | | | ||| || || | ||| |||||||| || ||||| ||| Sbjct 11434 TTCCTCCACGAAGACGAAGCACTAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGC 11375 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| | | || |||| ||||| || ||||| ||||| | |||||| |||| || Sbjct 11374 TTAGGGTCCTTCCATCTTCCAATTGCTTTCCAGCAAAAATCAATCTCTGCTGATCCGGAG 11315 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||||||||| |||||| ||| | | | | | ||||| | || | Sbjct 11314 GAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCCGAAGGCTCGA 11255 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTG 35733 | |||| |||||| || || || ||||||||||| || || ||||| Sbjct 11254 CATCCAACGTGATTGTCTTGCCGGTCAAAGTTTTTACGAAAATCTG 11209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787407222920