Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq456 84.2 1e-11 >seq456 Length=31050 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| || || ||| ||||| || ||||| || || || || || | || || Sbjct 6842 CACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTC 6783 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | ||| || |||||||| || | |||||| ||||| || || | ||| |||||||| Sbjct 6782 CAATTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTG 6723 Query 34617 GATCTTTTGTTTTAACGATAAA-ATTGTGTCTT-CGCTCTCCACTTCCACGGTTATCGTT 34674 |||||| ||||| ||| | || ||||| || | ||||| |||| ||| || || Sbjct 6722 GATCTTG-GTTTTGACGTTGTCGATGGTGTCGGACGGT-TCCACGTCCAGGGTGATGGTC 6665 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTG 34703 || || || | || || ||||||||||| Sbjct 6664 TTGCCAGTCAGGGTCTTTACAAAAATCTG 6636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725384492067