Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq134 95.1 1e-14 >seq134 Length=128537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || |||||| |||||| | |||||||||| ||||| || ||||| ||||| ||||| Sbjct 121564 CAAGCAAAAGAACAATGAAGTCCTTCGTCTCGACTAATTAGCTCGTTCGAAAAGGTTAAA 121623 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCA--AAATATAGCGGCAAATGACCCAGAAAAGA 4665 |||||||| | ||||||||||| ||||| |||| | | | |||| |||||||| | Sbjct 121624 CCGGGCATAAGGCCTCTCTTTTTCAGCCAGTAAATGGAACAG--AATGCACCAGAAAAAA 121681 Query 4666 ATATGCCTTCTACGGCGGCAAACGCTAC 4693 | || || || || || || || || || Sbjct 121682 AGATTCCCTCGACAGCAGCGAAGGCCAC 121709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427043880070967