Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1997 291 1e-73 seq195 183 4e-41 seq451 181 1e-40 >seq1997 Length=5797 Score = 291 bits (322), Expect = 1e-73 Identities = 1015/1563 (65%), Gaps = 47/1563 (3%) Strand=Plus/Plus Query 53513 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572 || ||||| || || ||||| | || ||||| || | || | || | || | | || Sbjct 24 AAAAGAATGAAGGCATCTGCCAGACCCTGAACCCCTAATCCAACCGGACGGTGACGCATA 83 Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632 || || |||| ||||| |||| |||||||| || | || || | || || |||||| Sbjct 84 TTTGAATTTTCTGCTTCCGGAACCGGATAATAGTTTCTGTCAATGACCTTGTTCAGGTTT 143 Query 53633 CTG---ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTATT 53689 || ||| | | | || || ||||| | | | || ||||| | | Sbjct 144 CTTGTTACACGTTTTGTTACGTTATAAAGCAGTTCGTGG---TTGAACTGTCCGTTTTCC 200 Query 53690 ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT---TAGCATCC 53746 |||||||| ||||| ||||| ||||| ||||| || || | |||| ||| | Sbjct 201 ACAAACATTGGCAATGAGATAGAAGCCAGGTTACATACCGCAATTTCATCTTTAGAA--- 257 Query 53747 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 53806 | || | || || || || || || ||| | | ||| ||||| | |||| || Sbjct 258 GTGTACTCCATGATTTCTGTACACAGGTTAGAAGAGCGGATTGTTCCCAGGTTTTTCTGG 317 Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866 || || ||| |||||| ||||| || ||| |||| || || |||||||| || Sbjct 318 TTTGATTTACGGTTTGCCGCATCTTTATACAGCATGTATGGTGTTCCGGTTTCAATTTGA 377 Query 53867 GATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT 53926 ||||| | ||| || ||| | | | ||||| || | ||| | |||| || Sbjct 378 GATTCCAGAATTTTTTCCCAAAGTTCTCTTGCCTTAATGGTT--TTTCTTCCTCTGCCCT 435 Query 53927 CTT--TCGTATAGTGTATACAATCG-TTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 || || || ||||| || || |||||| || || || ||| || | | ||| Sbjct 436 GTTCTTCATAAGAAGTATA-AAGCGCTTCAAATTCTTCACCGTAAATATCATAAAGTCCC 494 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 || ||||| | ||||||||||||| ||| || |||| || |||||||| || Sbjct 495 GGGCATTCGTTTGGACACATCAACGTCCATGTAGAATCTTCCTGAACACGTTTCATGAAC 554 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 | || | | |||| | || | |||| ||| | | | ||| || ||||| Sbjct 555 AAGTCCGAAGTCCACATGGCAAAGAATAAATCACGCGCACGCATTTCTTCTTTTCCATGG 614 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTC 54163 || || || || || ||||| | | |||||||| ||||| | ||| | || || | | Sbjct 615 TTTTTCTTCAGGTCAAGGAAATCAAAAATATCAGCGTGCCATGTTTCGATATAGATAG-C 673 Query 54164 ATAAC-TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 54222 | ||| ||| ||||| ||||||||| |||| || | |||||| | ||| |||| Sbjct 674 AAAACTTCCTTTGCGTTTTCCTCCTCCCTGGTCTACATAACGAGCGGTATCATTGAAAAC 733 Query 54223 TCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACT 54282 | |||||| |||| ||| || || || | || || || ||| ||||||| || | Sbjct 734 ACGCAACATCGGAACAATTCCGTTTGACGTTCCGTTTGTTCCGCGGATATAGGAACCCGT 793 Query 54283 GGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCA 54342 |||||||| |||| ||||| || || || || || ||| || || ||| || Sbjct 794 GGCACGAACATTATGGATTGAAAGCCCGATTCCTCCAGCCGATTGTGAAATTTTGGCTGT 853 Query 54343 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 54402 | | |||| |||||| || || || || ||||| || ||| ||| || || || || Sbjct 854 TTGCTTTAGCGTATCGTAAATTCCGTCGATACTGTCGTCCTGCATTGCCAGAAGGAAGCA 913 Query 54403 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 54462 | ||||||||| | |||||| ||||| ||||| || || | || |||||||| Sbjct 914 GGAAGACATTTGCGGTTTTGGAGTTCCGGCATTGAATAACGTTGGCGTTGCATGCGTAAA 973 Query 54463 CCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT--GATGA 54520 | || | || | || | || || || | ||| || | | |||| ||| Sbjct 974 GAACTTCTTGGACATCAGGTCATAAGTTTCCAATACTGCATCCAGGT--CATTCAAATGG 1031 Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 54580 ||||| || || |||||||| |||||||| || |||||||| || || || |||||| Sbjct 1032 ATTCCAACGGCAACACGCATCAACATGTGTTGTGGTCTTTCCACAATTTTTCCATTTATT 1091 Query 54581 TTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTC 54638 || |||| || || ||||| || ||||| || ||||| | ||| ||||| |||| Sbjct 1092 TTTAGCAGATACGAACGCTCCAACGTCTTAAATCCGAAATAATCGTAGTTGAAA--TCTC 1149 Query 54639 GTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG-GTA 54697 | |||||| | | || | | | | || || | || |||| || || Sbjct 1150 TATTGTAAATTACATGGGAATCCAAAAAAGCTGCATTTTCCTGAATCACAT---TGTATA 1206 Query 54698 ATACT--TGAAATAATCGGAGAATGTTTCCCAT---TTTTAGGATTGACATAGTTAAATA 54752 | || ||||| || |||||| || | || || | ||||| |||||| ||||| Sbjct 1207 CTTCTTCTGAAAGAAGCGGAGA---TTCCTGATTGGTTCTTGGATTCACATAG--AAATA 1261 Query 54753 AA--TCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810 | || |||||| ||| || |||||| || | ||||| || ||||| | || Sbjct 1262 CATTTCTTTCATCGTTTCTGAGAACGATTTTTTGGTATTCTTGTGAAGGTTTGAAATTGC 1321 Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 54870 ||| || || || | ||||||||||||||| | || | ||||| |||| Sbjct 1322 TATCCTTGCTGCCAACTGGGCATAATCCGGATGGGCAATTGTCATTGCTGCTGCGGTTTC 1381 Query 54871 GGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 54930 |||| ||| ||||||| ||| ||||| || |||| ||| | || | |||||| Sbjct 1382 TGCTGCAAGATTGTCCAACTCTGAAGTTGTAACACCATCATACAACCCCTCGATAACGCG 1441 Query 54931 CATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAAT 54990 ||| |||| ||| | ||||||| | |||| ||| ||||| || ||||||||| |||| Sbjct 1442 CATTGCTACTTTTACCGGATCTACAAGATC---GTTCAAGCCGTAGCATAATTTTTTAAT 1498 Query 54991 ACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAA 55050 | | || || ||||||||||| || || ||| || | || ||||| ||| | Sbjct 1499 TCTATCCGTAATCTTATCAAACATTACCGGCTCTCTGTGACCGTCTCTTTTAACTACATA 1558 Query 55051 CAT 55053 ||| Sbjct 1559 CAT 1561 Score = 197 bits (218), Expect = 2e-45 Identities = 595/904 (66%), Gaps = 41/904 (5%) Strand=Plus/Plus Query 23834 AACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAA 23893 |||||| ||| || ||||| || | ||||||||| ||||| |||||||| | ||| Sbjct 1815 AACTCCAGCTTTCTGATATTCTGAAACTCTTTTTTCGAAGAAATTTGTTTTACCCTGTAA 1874 Query 23894 TGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAA 23953 || || | ||||| ||||| | ||||| | | ||||| | |||| | |||| || Sbjct 1875 AGAGATCATATCCATAAAATCAAACGGATTCGCAGAGTTATACACTCTTGCACATCCTAA 1934 Query 23954 TTC-AGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCA 24012 ||| | ||| ||||| || | ||||| || | ||| | |||| | | |||| Sbjct 1935 TTCTACTAAT-AATCTGTCGGTTACAAATTCTAAGTATTGTGTCATTAAGTTTGCGTTCA 1993 Query 24013 TTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA----GAG--- 24065 |||| || | | || ||||||| | || | ||||||| ||||||| ||| Sbjct 1994 TTCCAATTAAGCTCACCGGAAGAGATTCTGTTATAAATTCTCTTTCAATATCAAGAGCCT 2053 Query 24066 --ACCGCG---TCTGTTATAATAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAA 24119 ||| | ||||| || | | | || | ||| || || ||||| | Sbjct 2054 GTACCAGGATTTCTGTAATTCTGGCTTTTGAAACTTTATTAACGAGGTGG------TGGT 2107 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 ||| ||| || ||| ||||| || |||| || || || | ||| ||||| Sbjct 2108 TGTGCAAATGC---AC-TGCAAAATCACAATGTACGCCTTCATCACGTGAAATCAATTCA 2163 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 || ||||| || || || ||||| | ||||| ||||| | |||| | || || ||| Sbjct 2164 TTTGAAAAAGTAAGACCCGGCATCAATCCACGTTTTTTCAACCAATAGATAGAACAGAAT 2223 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299 | ||| || || || ||||||||||| || ||||| ||||| |||||||| || | Sbjct 2224 GCTCCTGAGAAAAAGATTCCTTCTACGGCTGCAAAAGCAATCAGTCTTTCAGCAAATGAA 2283 Query 24300 GCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 24359 || ||| ||||| ||| |||||| || || || || || | || | | Sbjct 2284 TCGGATTCA---ATCCATTTTAAAGCCCAGTCCGCTTTTTTCTTAATTGCCGGAAATACT 2340 Query 24360 TCTATAGCATTAAAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCA 24417 || | ||| | || || | || ||||| | || |||||| ||||| |||||||||| Sbjct 2341 TCCAAAGCGTGGAAAAGCTGGTCCTTTTC--TGCTTCATCTTTTACATACGTATCAATCA 2398 Query 24418 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 24477 |||| ||| |||| || || || || || ||||| |||||||||||| || Sbjct 2399 GAAGAGAATAGGTTTCGCTGTGGATATTCTCCATCATGATTTGGAATCCGTAGAAAAATT 2458 Query 24478 TAGCCTCGGTAATCTGTACTTC-TATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 |||| || | | || ||||| | |||||||| ||||| | ||||||||||| || Sbjct 2459 TAGCTTCCGGATATTGAACTTCGTTTACAAAAT-TCTCTGCCAGGTTTTCATTCACAATA 2517 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 24596 ||||| || |||||||| || || | |||||| ||||||||||| || || | Sbjct 2518 CCGTCTGATGCAGCAAAAAAAGCTAAAATATGTTTGATAAAATATTTCTCATCATTATTC 2577 Query 24597 AGTTTA---TTCCAATCATTGAT--ATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 24651 || ||| ||||| || |||| ||| | | ||| | |||||| | ||||||| Sbjct 2578 AGCTTATTGTTCCAGTC--TGATAAATCCTGGTGCAAATCAATTTCTTCGGCAGTCCAAA 2635 Query 24652 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAA 24711 | ||| || || |||||| | ||| || ||||| | || || || ||||| | Sbjct 2636 AACTTGCTTCCATTTTCTTATACCACTCCCAAATATCATGGTGTTTTATAGGGAAAATCA 2695 Query 24712 CAAA 24715 | || Sbjct 2696 CGAA 2699 >seq195 Length=24554 Score = 183 bits (202), Expect = 4e-41 Identities = 417/621 (67%), Gaps = 15/621 (2%) Strand=Plus/Minus Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186 |||| | || || || ||| || | |||||| || | ||| || | || || |||| Sbjct 23299 ACATGAGGCAGGCAAAGTCGGTATGCATACCCTCATCACGACTGATAAGCTCATTCGAAA 23240 Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 24245 | |||| || ||||| || ||||| || || ||||| || ||||| ||| || || ||| Sbjct 23239 AGCTGAGACCAGGCATGAGACCACGTTTCTTCAGCCAGAAGATGGA-GCAGAAGGAGCCA 23181 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-----ACCGG 24300 || ||||| || || || |||| || || |||| ||| | ||| | || || Sbjct 23180 GAGAAGAAGATACCCTCCACTGAGGCGAACGCAAGAAGACGCTCTGCGTATGACGACACA 23121 Query 24301 CGCTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 24359 ||| | ||| |||||| | |||||| |||| ||||| || ||||| || || || Sbjct 23120 CGCGGGTCACA---CCACTTGAGTGCCCAAGCGGCTTTCTTCTTCACACACGGGATAGTG 23064 Query 24360 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 24419 || || ||| | | | || || || | || || | || || ||||| | Sbjct 23063 TCAATGGCACGCAGCAAAAGGTCCTTCTCTACAGCGTCCTTGATGTACGTGTCAATGAGT 23004 Query 24420 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTA 24479 || ||| | ||||| |||||||| || || || || ||||| ||||||||||| | | Sbjct 23003 AGCGAATAGACCTCCGAGTGAATGTTCTCGATAGCAATCTGAAAACCGTAGAAACACCGA 22944 Query 24480 GCCTCGGTAATCTGTACTTCTATACAAAATCGTTC--TGCTAAATTTTCATTCACTATTC 24537 || |||| || ||| ||||| | | || |||| || | ||||||||||| || | Sbjct 22943 GCTTCGGGAACCTGCACTTCGTTGCTGAA--GTTCATGGCCAGGTTTTCATTCACAATGC 22886 Query 24538 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA 24597 | |||||||||||||| || || | ||||| || ||||| | |||| || | Sbjct 22885 CATCACTGGCTGCAAAGAAGGCGAGCACATGCTTGATAAAGTGACGCTCGTTGTCAGTGA 22826 Query 24598 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 24657 | || |||||||| || || || | | ||||| || || | |||||||| || | Sbjct 22825 GGTTTTTCCAATCTTTAATGTCGTGCACCAGATCCAGCTCCTCAGCCGTCCAAAACGAGG 22766 Query 24658 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC 24717 |||| || || || ||||| | ||||| |||| | ||||| || || | ||||| | Sbjct 22765 CCTCAGCTTTCTTGTACATCTGCCAGACATCATTCTCCTGAATCGGGAAGAGTACAAAAC 22706 Query 24718 TATTTGGATTTTTTGCAAGGA 24738 || || || | |||||| Sbjct 22705 GGTTGGGGTTCTCCACAAGGA 22685 >seq451 Length=16219 Score = 181 bits (200), Expect = 1e-40 Identities = 788/1238 (64%), Gaps = 20/1238 (2%) Strand=Plus/Plus Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 |||| || ||||| || ||||| ||||| || || || | || || || ||||| | Sbjct 8238 CGTAGTAGATGGTCTCAAAGATGTTCTTGTTCAGTTCACGAGCCTCTTCACTTTCAAACG 8297 Query 53505 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 53564 | | || | ||||| ||| || || || | |||||||||||||| || | || | || Sbjct 8298 CAAAGTTCATGAGAAGAAAAGCATCGGCCAGACCTTGAACACCAATTCCCACGGGACGAT 8357 Query 53565 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624 | | | | || || || |||||||| || || || || || | || || | ||| | Sbjct 8358 GGCGCATGTTGGATTTTCGAGCTTCTGCAACCGGGTAGTAGTTGACGTCAATGACTTTGT 8417 Query 53625 TGAGGTTTCTGACAATTACTTTGACCACATCCTTCAG---TTTG-AGAAAATCAAATTGT 53680 ||||||| | | | || ||| ||| || | ||| |||| || | || | Sbjct 8418 TGAGGTTGCGGGTGACGACCTTGGTCACGTCGTACAGCAATTTGTAGTTGAACACA---- 8473 Query 53681 CCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTA 53740 || ||| |||||| || || || | || |||| || || || || ||||| | Sbjct 8474 CCGTCTTCCACAAACTTGGGCAGCGCCACTGACGCCAAGTTGCACACCGCAACCTCGTCC 8533 Query 53741 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 53800 | | || || | || | |||| ||| | ||||| | ||| || || | ||| Sbjct 8534 GGAGACGTGTACTCCATCACCTCACAGCACAAGTTACTGGATCGGATCGTGCCAAGATTC 8593 Query 53801 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCA 53860 || ||||| ||| || ||| ||||| ||||| || || ||| || || ||| Sbjct 8594 TGCTGATTGGACTTACGATTGGCCGCGTCCTTGTAAAGCATAAAGGGCACCCCCGTCTCA 8653 Query 53861 ATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTC 53920 ||||| | || | || || ||| | | || || || | || | | | Sbjct 8654 ATCTGTGCGTCCAAGATGGCAAACCACAACTGCTGCGCATTGATCGTC--TTGCGAGCAC 8711 Query 53921 TTTTCTCTTTCGTATA-GT---GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTC 53976 | ||| ||| ||| || ||| | || ||||| || |||||||| | || Sbjct 8712 GTCCCTCCTTCTCATACGTTTCGTAGAGGGTC--TCAAATTCATCTCCCCAGCACTCGTA 8769 Query 53977 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036 | |||||| ||| | ||||| | ||| ||||| || | | | ||||||||| Sbjct 8770 GAGACCAGGAGCTTCGTTTGGACAAAACAAACTCCACTTGCCATTACTTTCCACTCGTTT 8829 Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096 ||| || ||||||| ||||| ||||| ||| | || | | || || || | Sbjct 8830 CATGAACAGATCAGATATCCATAGAGCGTAAAACAAGTCACGCGCTCGGTGCAGTTCACT 8889 Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156 || ||| ||| |||||||||||| | | | || | |||||| ||||||||||| Sbjct 8890 GCCGTGATTTTTTCGGAGATCGAGGAACTCAAACACGTCTGCATGCCATGGTTCCAAGTA 8949 Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216 || | | || ||||| ||| || || || | || | ||| |||| || Sbjct 8950 GATTGCAAAGGAACCTTTGCGTTTACCTCCACCTTGGTCCACATACCGAGCCGTGTCGTT 9009 Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276 | | || | |||||| || || ||||| ||||| | || || || || ||| ||||| Sbjct 9010 AAACACGCGCAACATGGGGATGATACCGTTGGAAGACCCGTTAGTACCACGGATGTAGCT 9069 Query 54277 TCCACTGGCACGAATATTACTAAT--TGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 | || || ||||| || |||| || || || || ||| || ||||| Sbjct 9070 GTTCGTAGCTCGGATATTGTGCATGCTGATC--CCAATACCTCCCGCCCACTTTGAGATA 9127 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 | || ||| | || || ||||||||||| || || || |||||| |||| |||| Sbjct 9128 CAAGCACATTGCTTCAATGTATCATAGATTCCTTCAATTGAATCATCTTGCATGGCAAGT 9187 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 | |||||| ||| | ||| | || ||| || |||||||| || || || | || Sbjct 9188 AAAAAACACGAAGATAATTGCGGCCGTGGAGTGCCAGCATTAAACAACGTGGGCGTCGCA 9247 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCAT 54514 || ||||| | |||| ||| | | | ||||||||| | ||||| | || | | Sbjct 9248 TGGGTAAAGAACTTTTGAGACATCAATTCGTACGTCTCTAAAGCTGCTTGAATGTTGCTC 9307 Query 54515 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 54574 | |||||| || | || || ||||| | ||| ||||| |||| |||||| | ||| Sbjct 9308 TTATGAATCCCAAGAGCAACGCGCATAATCATTTGCTGGGGTCGTTCAACCACTTTGCCA 9367 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 54634 || | | | ||| | | |||| |||||||| ||||| || | ||| |||| Sbjct 9368 TTCACGCGGAAAAGGTAACCTCTCTCCAGTGTTTTAAACCCAAAGTAATCGTACTCAAAG 9427 Query 54635 TCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 || || |||| ||| || | ||||| | || |||||| Sbjct 9428 TCCCGGTCGTGAATGATTGCCGAGTTTAATTCATCCTT 9465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593457846600720