Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq29522 111 4e-20 >seq29522 Length=371 Score = 111 bits (122), Expect = 4e-20 Identities = 81/93 (87%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 17142 TTATTATCCTGCGCC-CGGCCCTTTAGCTAAGTGGTGAGAGCGAGCGACTCATAATCGCC 17200 |||| ||||| |||| |||||| |||||| |||||| ||||| ||||||||||||||| Sbjct 185 TTATAATCCTCCGCCACGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCT 244 Query 17201 AGGTCGCTGGTTCAAATCCAGCAAGGGCCACCA 17233 |||||||||||||| ||||||| ||||||||| Sbjct 245 TGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136060954547166