Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1997 302 6e-77 seq451 242 5e-59 seq195 226 4e-54 >seq1997 Length=5797 Score = 302 bits (334), Expect = 6e-77 Identities = 911/1386 (66%), Gaps = 47/1386 (3%) Strand=Plus/Plus Query 79600 ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT---TAGCATCC 79656 |||||||| ||| | || ||| ||||| ||||| || || | |||| ||| | Sbjct 201 ACAAACATTGGCAATGAGATAGAAGCCAGGTTACATACCGCAATTTCATCTTTAGAA--- 257 Query 79657 GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGA 79716 | || | || ||||| || || |||||| | | || ||||| | |||| || Sbjct 258 GTGTACTCCATGATTTCTGTACACAGGTTAGAAGAGCGGATTGTTCCCAGGTTTTTCTGG 317 Query 79717 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGA 79776 || || ||| |||||| ||||| || ||| | || || || |||||||| ||| Sbjct 318 TTTGATTTACGGTTTGCCGCATCTTTATACAGCATGTATGGTGTTCCGGTTTCAATTTGA 377 Query 79777 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCT 79836 ||||| | ||| || ||| | ||| ||||| || | || | |||| || Sbjct 378 GATTCCAGAATTTTTTCCCAAAGTTCTCTTGCCTTAATGGTTT--TTCTTCCTCTGCCCT 435 Query 79837 CTT--TCGTATTGTGTATATAATCG-TTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 || || || ||||| || || ||| || || || || ||| ||| | | ||| Sbjct 436 GTTCTTCATAAGAAGTATA-AAGCGCTTCAAATTCTTCACCGTAAATATCATAAAGTCCC 494 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 || ||||||| ||||||||||||| ||| ||| |||| || |||||||| || Sbjct 495 GGGCATTCGTTTGGACACATCAACGTCCATGTAGAATCTTCCTGAACACGTTTCATGAAC 554 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 | || | | |||| | || | |||| ||| | | | || || ||||| Sbjct 555 AAGTCCGAAGTCCACATGGCAAAGAATAAATCACGCGCACGCATTTCTTCTTTTCCATGG 614 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 || || || || || ||||| | | |||||||| ||||| | ||| | || || | | Sbjct 615 TTTTTCTTCAGGTCAAGGAAATCAAAAATATCAGCGTGCCATGTTTCGATATAGATAG-C 673 Query 80074 ATAACTCCCGGT-CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | |||| || | ||||| ||||||||| |||| || | |||||| | ||| |||| Sbjct 674 AAAACTTCCTTTGCGTTTTCCTCCTCCCTGGTCTACATAACGAGCGGTATCATTGAAAAC 733 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 | |||||| |||| ||| || || || || || || || ||| ||||||| || | Sbjct 734 ACGCAACATCGGAACAATTCCGTTTGACGTTCCGTTTGTTCCGCGGATATAGGAACCCGT 793 Query 80193 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252 |||||||| |||| ||||| || || ||||| || ||| || || ||| || Sbjct 794 GGCACGAACATTATGGATTGAAAGCCCGATTCCTCCAGCCGATTGTGAAATTTTGGCTGT 853 Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 | | |||| |||||| || || || || || || || || ||| || || || || Sbjct 854 TTGCTTTAGCGTATCGTAAATTCCGTCGATACTGTCGTCCTGCATTGCCAGAAGGAAGCA 913 Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372 | ||||||||| | |||||| ||||| ||||| || || | || |||||||| Sbjct 914 GGAAGACATTTGCGGTTTTGGAGTTCCGGCATTGAATAACGTTGGCGTTGCATGCGTAAA 973 Query 80373 CCATTTTTCAGACAGTAGATTGTACGTCT-CAATAGCTGATTCTATATCCCATT--GATG 80429 | || | |||| || | || || | ||||| ||| || | | |||| ||| Sbjct 974 GAACTTCTTGGACATCAGGTCATAAGTTTCCAATA-CTGCATCCAGGT--CATTCAAATG 1030 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 ||||| || || |||||||| |||||||| || |||||||| || || || |||||| Sbjct 1031 GATTCCAACGGCAACACGCATCAACATGTGTTGTGGTCTTTCCACAATTTTTCCATTTAT 1090 Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 80547 ||| | || || || ||||| || ||||| || ||||| | ||| ||||| ||| Sbjct 1091 TTTTAGCAGATACGAACGCTCCAACGTCTTAAATCCGAAATAATCGTAGTTGAAA--TCT 1148 Query 80548 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTG 80607 | | |||||| | | || | | | | || || | || |||| || Sbjct 1149 CTATTGTAAATTACATGGGAATCCAAAAAAGCTGCATTTTCCTGAATCACAT---TG--T 1203 Query 80608 ATACT-----TGAAATAATCGGAGAATGTTTCCCAT---TTTTAGGATTAACATAGTTGA 80659 ||||| ||||| || |||||| || | || || | ||||| |||||| | Sbjct 1204 ATACTTCTTCTGAAAGAAGCGGAGA---TTCCTGATTGGTTCTTGGATTCACATAG--AA 1258 Query 80660 ATAAA--TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAC 80717 ||| | || | |||| ||| || |||||| || | |||||| || ||||| | Sbjct 1259 ATACATTTCTTTCATCGTTTCTGAGAACGATTTTTTGGTATTCTTGTGAAGGTTTGAAAT 1318 Query 80718 GGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTAT 80777 ||||| || || || || ||||||||| ||||| | || | ||||| | Sbjct 1319 TGCTATCCTTGCTGCCAACTGGGCATAATCCGGATGGGCAATTGTCATTGCTGCTGCGGT 1378 Query 80778 TTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAAC 80837 ||| ||||| ||| ||||||| ||| ||||| || |||| ||| | || | |||||| Sbjct 1379 TTCTGCTGCAAGATTGTCCAACTCTGAAGTTGTAACACCATCATACAACCCCTCGATAAC 1438 Query 80838 CTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCT 80897 ||| |||| ||| | ||||||| | |||| ||| ||||| || ||||||||| | Sbjct 1439 GCGCATTGCTACTTTTACCGGATCTACAAGATC---GTTCAAGCCGTAGCATAATTTTTT 1495 Query 80898 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGAC 80957 ||| | | ||| || ||||||||||| || || ||| || | || ||||| || Sbjct 1496 AATTCTATCCGTAATCTTATCAAACATTACCGGCTCTCTGTGACCGTCTCTTTTAACTAC 1555 Query 80958 AAACAT 80963 | |||| Sbjct 1556 ATACAT 1561 Score = 159 bits (176), Expect = 5e-34 Identities = 589/906 (65%), Gaps = 45/906 (5%) Strand=Plus/Plus Query 49659 AACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAA 49718 |||||| ||| || ||||| || | ||||||||| ||||| ||||| || | || Sbjct 1815 AACTCCAGCTTTCTGATATTCTGAAACTCTTTTTTCGAAGAAATTTGTTTTACCCTGTAA 1874 Query 49719 TGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA 49778 || || | ||||| |||||||||||||| | | ||||| | | || | |||| || Sbjct 1875 AGAGATCATATCCATAAAATCAAACGGATTCGCAGAGTTATACACTCTTGCACATCCTAA 1934 Query 49779 TTC-AGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCA 49837 ||| | ||| ||||| || | |||||||||| ||| | |||| | | |||| Sbjct 1935 TTCTACTAAT-AATCTGTCGGTTACAAATTCTAAGTATTGTGTCATTAAGTTTGCGTTCA 1993 Query 49838 TTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATG----GA---- 49889 |||| || | | || ||||||| | || | ||||||| |||||| || Sbjct 1994 TTCCAATTAAGCTCACCGGAAGAGATTCTGTTATAAATTCTCTTTCAATATCAAGAGCCT 2053 Query 49890 -TACC-GCAT--CTGTTATAATAGATCT---AACGGTTTCTTCACTCGGTGGATGCAATA 49942 |||| | || |||| || | | | | ||| ||| || || ||||| | Sbjct 2054 GTACCAGGATTTCTGTAATTCTGGCTTTTGAAAC--TTTATTAACGAGGTGGTGGT---- 2107 Query 49943 AATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTT 50002 ||| ||| || ||| ||||| || || | || || || | ||| | || Sbjct 2108 --TGTGCAAATGC---AC-TGCAAAATCACAATGTACGCCTTCATCACGTGAAATCAATT 2161 Query 50003 CGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAA 50062 | || ||||| || || || ||||| | ||||| ||||| | |||| | || || | Sbjct 2162 CATTTGAAAAAGTAAGACCCGGCATCAATCCACGTTTTTTCAACCAATAGATAGAACAGA 2221 Query 50063 ATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC 50122 ||| || || || |||||||||||||| || ||||| |||| ||||| || || | Sbjct 2222 ATGCTCCTGAGAAAAAGATTCCTTCTACGGCTGCAAAAGCAATCAGTCTTTCAGCAAATG 2281 Query 50123 TGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || ||| ||||| ||| |||||| || || || || || | || | Sbjct 2282 AATCGGATTCA---ATCCATTTTAAAGCCCAGTCCGCTTTTTTCTTAATTGCCGGAAATA 2338 Query 50183 TTTCTATGGCATTAAAGAGATAGtttttttCATTACT--ATCTTTAACATAAGTATCGAT 50240 ||| | || | || || | || ||||| | || |||||| ||||| ||||| || Sbjct 2339 CTTCCAAAGCGTGGAAAAGCTGGTCCTTTTC--TGCTTCATCTTTTACATACGTATCAAT 2396 Query 50241 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACA 50300 || |||| ||| |||| || || || || || || || |||||||||||| | Sbjct 2397 CAGAAGAGAATAGGTTTCGCTGTGGATATTCTCCATCATGATTTGGAATCCGTAGAAAAA 2456 Query 50301 TCTAGCCTCGGTAATCTGCACTTC-TGTACAAAATCGTTCAGCTAAATTTTCATTCACTA 50359 | |||| || | | || ||||| | |||||||| || || | ||||||||||| | Sbjct 2457 TTTAGCTTCCGGATATTGAACTTCGTTTACAAAAT-TCTCTGCCAGGTTTTCATTCACAA 2515 Query 50360 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTG 50419 | ||||| || |||||||| || || | |||||| ||||||| ||| || | Sbjct 2516 TACCGTCTGATGCAGCAAAAAAAGCTAAAATATGTTTGATAAAATATTTCTCATCATTAT 2575 Query 50420 TTAGTTTA---TTCCAATCATTGAT--ATCTTTAGATATATCTACTTCTTCCACTGTCCA 50474 | || ||| ||||| || |||| ||| | | ||| | |||||| | ||||| Sbjct 2576 TCAGCTTATTGTTCCAGTC--TGATAAATCCTGGTGCAAATCAATTTCTTCGGCAGTCCA 2633 Query 50475 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 ||| ||| || || |||||| | ||| || ||||| | || || |||||||| Sbjct 2634 AAAACTTGCTTCCATTTTCTTATACCACTCCCAAATATCATGGTGTTTTATAGGGAAAAT 2693 Query 50535 AACAAA 50540 || || Sbjct 2694 CACGAA 2699 >seq451 Length=16219 Score = 242 bits (268), Expect = 5e-59 Identities = 993/1543 (64%), Gaps = 47/1543 (3%) Strand=Plus/Plus Query 79065 AAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTC 79124 ||| || |||| | ||| | ||| |||| || || || || || || | ||||| Sbjct 7945 AAACTCACCAGCGAGTACGCGACGATTGTACATGTTTGATGTGTACGGCTCGATGGATTC 8004 Query 79125 ATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATT 79184 ||| || |||| || || |||||||| || ||||||||||| ||||| | ||| || Sbjct 8005 ATTGTTGCCCAGGATCTGGGCAGTTGAAGCAGTTGGCATAGGAGCCACTAGCAAAGAGTT 8064 Query 79185 TCTAAGACCGTA--TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 | || ||||| ||||| ||| | ||| || ||| | ||||||||| ||||| Sbjct 8065 ACGAATACCGTGCTTGATCACATTCTC-CTTCAAGGCGGTCC-AGTCCCAAAGACCAGAC 8122 Query 79243 G--GGACA-ACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTG 79299 | ||| ||| ||| | ||| |||| | || || || || || || || | Sbjct 8123 GACGGAGTGACACCCCACATGTCAAATTGGAAGATCCCCTTGCTGGCAGGGGAGCCCTGG 8182 Query 79300 TATGTTTCATAAGGTCC---TTCCTTTTCGGCTAATTC---ACAACTCGCC-TCTAATGC 79352 | || || || || || |||||| ||| | || | || || || || || Sbjct 8183 AACGTCTCGTACGGACCCAGTTCCTT---GGCAATCTCCATAGAAGTCTCCATCGAAG-- 8237 Query 79353 TCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAA 79412 |||| || ||||| || || || ||||| || || || | || ||| || ||||| Sbjct 8238 --CGTAGTAGATGGTCTCAAAGATGTTCTTGTTCAGTTCACGAGCCTCTTCACTTTCAAA 8295 Query 79413 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 79472 | | | || | ||||| ||| || || || | |||||||||||||| || | || | Sbjct 8296 CGCAAAGTTCATGAGAAGAAAAGCATCGGCCAGACCTTGAACACCAATTCCCACGGGACG 8355 Query 79473 ATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 79532 ||| | | | || || || |||||||| || || || || || | || || | ||| Sbjct 8356 ATGGCGCATGTTGGATTTTCGAGCTTCTGCAACCGGGTAGTAGTTGACGTCAATGACTTT 8415 Query 79533 ATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAG---TTTG-AGAAAATCAAATC 79588 ||||| || | | | || ||| ||| || | || |||| || | || | | Sbjct 8416 GTTGAGGTTGCGGGTGACGACCTTGGTCACGTCGTACAGCAATTTGTAGTTGAACACACC 8475 Query 79589 GTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT 79648 ||| | |||||| || || ||| || || |||| || || || || ||||| | Sbjct 8476 GTCTTCC----ACAAACTTGGGCAGCGCCACTGACGCCAAGTTGCACACCGCAACCTCGT 8531 Query 79649 TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAAT 79708 | | || || | || | ||| ||| | |||||| | || || || | || Sbjct 8532 CCGGAGACGTGTACTCCATCACCTCACAGCACAAGTTACTGGATCGGATCGTGCCAAGAT 8591 Query 79709 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTT 79768 | || ||||| ||| || ||| ||||| ||||| || || || || || | Sbjct 8592 TCTGCTGATTGGACTTACGATTGGCCGCGTCCTTGTAAAGCATAAAGGGCACCCCCGTCT 8651 Query 79769 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGT-AT 79827 ||||||| | || | || || ||| | ||| || | | || | |||| | Sbjct 8652 CAATCTGTGCGTCCAAGATGGCAAACCACA--ACTGCTGCGCAT-TGATCGTCTTGCGAG 8708 Query 79828 CTCTTTTCTCTTTCGTATT-GT---GTATATAATCGTTCGAACTCGTCTCCCCAAACATC 79883 | | | ||| ||| || || ||| | || || || || |||||||| || Sbjct 8709 CACGTCCCTCCTTCTCATACGTTTCGTAGAGGGTC--TCAAATTCATCTCCCCAGCACTC 8766 Query 79884 GTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACT 79941 || | |||||| ||||| ||||| | ||| ||||| |||| | |||| ||| Sbjct 8767 GTAGAGACCAGGAGCTTCGTTTGGACAAAACAAACTCCACTTGCCATTA--CTTTCCACT 8824 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 |||||||| || ||||||| ||||| ||||| ||| | || | | || ||| Sbjct 8825 CGTTTCATGAACAGATCAGATATCCATAGAGCGTAAAACAAGTCACGCGCTCGGTGCAGT 8884 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || | || ||| ||| |||||||||||| | | | || | |||||| |||||| Sbjct 8885 TCACTGCCGTGATTTTTTCGGAGATCGAGGAACTCAAACACGTCTGCATGCCATGGTTCC 8944 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 ||||| || || | || ||||| ||| || || || | || | ||| ||| Sbjct 8945 AAGTAGATTGCAAAGGAACCTTTGCGTTTACCTCCACCTTGGTCCACATACCGAGCCGTG 9004 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 | ||| | || | |||||| || || ||||| ||||| | || || || || ||| Sbjct 9005 TCGTTAAACACGCGCAACATGGGGATGATACCGTTGGAAGACCCGTTAGTACCACGGATG 9064 Query 80182 TAGCTTCCACTGGCACGAATATTACTAAT--TGATAGACCTATTCCCCCTGCCATTTTAG 80239 ||||| | || || ||||| || |||| || || || || ||| || | Sbjct 9065 TAGCTGTTCGTAGCTCGGATATTGTGCATGCTGATC--CCAATACCTCCCGCCCACTTTG 9122 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 |||| | || ||| | || || ||||||||||| || || || |||||| |||| Sbjct 9123 AGATACAAGCACATTGCTTCAATGTATCATAGATTCCTTCAATTGAATCATCTTGCATGG 9182 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 ||||| |||||| ||| | ||| | || ||| || |||||||| || || || | Sbjct 9183 CAAGTAAAAAACACGAAGATAATTGCGGCCGTGGAGTGCCAGCATTAAACAACGTGGGCG 9242 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT 80419 || || ||||| | |||| ||||| | | ||||||||| | ||||| || || | Sbjct 9243 TCGCATGGGTAAAGAACTTTTGAGACATCAATTCGTACGTCTCTAAAGCTGCTTGAATGT 9302 Query 80420 CCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 80479 | | |||||| || | || || ||||| | ||| ||||| |||| |||||| | | Sbjct 9303 TGCTCTTATGAATCCCAAGAGCAACGCGCATAATCATTTGCTGGGGTCGTTCAACCACTT 9362 Query 80480 TGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 80539 || ||| | || | |||| | | |||| |||||||| ||||| || | ||| Sbjct 9363 TGCCATTCACGCGGAAAAGGTAACCTCTCTCCAGTGTTTTAAACCCAAAGTAATCGTACT 9422 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 |||||| || |||| ||| || ||||||| | || |||||| Sbjct 9423 CAAAGTCCCGGTCGTGAATGATTGCCGAGTTTAATTCATCCTT 9465 >seq195 Length=24554 Score = 226 bits (250), Expect = 4e-54 Identities = 413/598 (69%), Gaps = 15/598 (3%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 |||| | || || || ||| |||| |||||| || | ||| || || || || |||| Sbjct 23299 ACATGAGGCAGGCAAAGTCGGTATGCATACCCTCATCACGACTGATAAGCTCATTCGAAA 23240 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | |||| || ||||| || ||||| || || ||||| || ||||| ||| || || ||| Sbjct 23239 AGCTGAGACCAGGCATGAGACCACGTTTCTTCAGCCAGAAGATGGA-GCAGAAGGAGCCA 23181 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-----ACTGG 50125 || |||||||| || || |||| ||| || |||| ||| | |||| | || || Sbjct 23180 GAGAAGAAGATACCCTCCACTGAGGCGAACGCAAGAAGACGCTCTGCGTATGACGACACA 23121 Query 50126 CGCTG-TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184 ||| | ||| |||||| | |||||| |||| ||||| || ||||| || || || Sbjct 23120 CGCGGGTCACA---CCACTTGAGTGCCCAAGCGGCTTTCTTCTTCACACACGGGATAGTG 23064 Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 50244 || |||||| | | | || || || | || || | || || || || | Sbjct 23063 TCAATGGCACGCAGCAAAAGGTCCTTCTCTACAGCGTCCTTGATGTACGTGTCAATGAGT 23004 Query 50245 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 50304 || ||| | ||||| |||||||| || || || |||||||| ||||||||||| | | Sbjct 23003 AGCGAATAGACCTCCGAGTGAATGTTCTCGATAGCAATCTGAAAACCGTAGAAACACCGA 22944 Query 50305 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTC 50362 || |||| || ||||||||| | | || ||||| || | ||||||||||| || | Sbjct 22943 GCTTCGGGAACCTGCACTTCGTTGCTGAA--GTTCATGGCCAGGTTTTCATTCACAATGC 22886 Query 50363 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA 50422 | |||||||||||||| || || | ||||| || ||||| || |||||| || | Sbjct 22885 CATCACTGGCTGCAAAGAAGGCGAGCACATGCTTGATAAAGTGACGCTCGTTGTCAGTGA 22826 Query 50423 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 50482 | || |||||||| || || || | | ||| | || || | |||||||| || | Sbjct 22825 GGTTTTTCCAATCTTTAATGTCGTGCACCAGATCCAGCTCCTCAGCCGTCCAAAACGAGG 22766 Query 50483 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||| || || || ||||| | ||||| |||| | || || ||||| | ||||| Sbjct 22765 CCTCAGCTTTCTTGTACATCTGCCAGACATCATTCTCCTGAATCGGGAAGAGTACAAA 22708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717949718063960