Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq451 95.1 1e-14 >seq451 Length=16219 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 147152 CAAATAGTACATGCCCGTTTTTAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAA 147211 || ||||||||||||||| || | ||||||| ||| | |||| || || |||| | Sbjct 7630 CATATAGTACATGCCCGTCTTGAGGCCCTTTTTCCATGCATAGAAATGCATAGATGTGAG 7689 Query 147212 AACTTTATAG---GTTGGATTGGCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTA 147268 |||| | || |||| ||| | || |||||||||||| ||||| ||||| Sbjct 7690 ---TTTACTGATCGTCGGATCGGCAATGTGAATATTGAGCGATTGACTCTGGCAAATGTA 7746 Query 147269 AGGTCCCCGCTCTGCGGCCATGTCCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTT 147328 || || || || || | ||||||||| || ||||| || |||||||| ||||||| Sbjct 7747 AGCGCCACGATCAGCCGACATGTCCAAGACCGACTTTTGCTTGATTTCCCACACGGTCTT 7806 Query 147329 GAAGAGCGCCTTGATATTGTGTGGAAT 147355 | | ||||||||| || |||||| Sbjct 7807 GTACTTTTCCTTGATATGGTCTGGAAT 7833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478449760212080