Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq9125 251 1e-61 seq19645 161 2e-34 seq14623 143 5e-29 seq34320 141 2e-28 seq31848 141 2e-28 seq32362 140 6e-28 seq25614 134 3e-26 seq20474 134 3e-26 seq79 134 3e-26 seq34564 129 1e-24 seq7414 129 1e-24 seq1402 91.5 3e-13 seq7057 86.0 1e-11 seq135 84.2 4e-11 >seq9125 Length=1575 Score = 251 bits (278), Expect = 1e-61 Identities = 529/770 (69%), Gaps = 33/770 (4%) Strand=Plus/Plus Query 268196 ACAGAATACTGGACCCCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATT 268255 || || ||||| || || || || ||||| ||||| || |||| || ||||| Sbjct 153 ACCGAGTACTGCACGCCGGTGGCGATCACGAAGTCGTCCGGCTGCTCCTGTTGCAGCATC 212 Query 268256 TTCCACATTGCTT-CG-ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGT 268313 ||||| ||| | || || ||||| ||||||||||| |||||| | ||| |||| Sbjct 213 ATCCAC--TGCATGCGCACGTAGTCTTTGGCATGGCCCCAGTCGCGCAGCGAGTCGATGT 270 Query 268314 TCCCGAGGAACAGGCATTTCTGCTTGCCGAG---CTTCACGC-GT--GCAAGACCGCGAG 268367 | || | | ||||||| | ||| |||| || || || || | ||||| | Sbjct 271 TACCCATGTACAGGCA---CGGCT---CGAGACCCTGGGCGATGTTGGCCATGCCGCGGG 324 Query 268368 TGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGC 268427 |||| || ||||||||||| || |||||||| | || |||||||||||||||||||| Sbjct 325 TGATCTTGCGGGTCACGAAGGTTTCGCCACGGCGCGGCGACTCGTGGTTGAAGAGGATGC 384 Query 268428 CGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACA 268487 ||||||||||| |||||||||| || || ||||| || ||| ||||||| || ||| Sbjct 385 CGTTGCACGCGTACATGCCATAGGCTTCGCGGTAATTGACGGTGATCCAGTAGGCGTACA 444 Query 268488 TCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTT 268547 || || || || ||||| || || || | |||||| || || ||| || ||| ||| Sbjct 445 GTTTGGCGACCGCATACGGCGAGCGCGGGTAGAAGGGGGTGGTTTCCTTCTGTGGGGTTT 504 Query 268548 CTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGA 268607 | | || ||| | ||||| ||||| || || || ||||| ||| | ||||| | Sbjct 505 CCTGCACCAGGCCGTACAGCTCCGAGGTGGAGGCCTGATAGAAACGGGTTTTCTTTTCCA 564 Query 268608 GACCGCAG-ATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCT 268666 | || ||| | ||||| |||||||| | || || || |||||| |||| || || || Sbjct 565 GGCC-CAGCAGGCGGATGGCCTCGAGGATGCGCAGGGTACCCATGGCATCGACATCGGCG 623 Query 268667 GTATACTCCGGCATCTCGAA--TGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAA 268724 || || |||||| ||||| |||| || || ||| || ||||| ||||| || | Sbjct 624 GTGTATTCCGGCGCTTCGAAGCTGACCGCT--ACGTGGGATTGTGCGCCGAGGTTGTAGA 681 Query 268725 CCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTC 268784 |||| || || | || | ||| | ||| ||||||| |||||| ||||||| | Sbjct 682 CCTCGTCAGGCTGCACTTCCTGGATGATGCGAGTCAGGTTCGACGAGTCGTTGAGGTCGC 741 Query 268785 CGTAGTGCAACA-CAAGCTGCCCTG--ACTCGGAGTAC---TTGTCGTACA-GTGCATCA 268837 ||||||| | | ||| | ||| ||| || | | | ||| | ||| ||| Sbjct 742 CGTAGTGGAGGATGAAGTT---CTGGTTGTCGACGTGCGGATCCTGGTAGATGTG-ATCC 797 Query 268838 ATTCGCTGGGTATTCAGTTGCGAAGAGCGCCGTTTGATTCCATGAACGACGTACCCAATG 268897 | |||||||| || | ||| | ||| || ||||| ||||| || ||| || | Sbjct 798 ACACGCTGGGTGTTGAAGGACGACGCGCGGCGCTTGATGCCATGCACCTGGTAGCCTTTT 857 Query 268898 TTGATGAGGAATTCTGCAAGGTAAGAGCCATCTTGCCCCGTGATTCCCGT 268947 | | ||||| || |||||||| ||||| || || || ||||| || || Sbjct 858 TCCAGCAGGAACTCGGCAAGGTAGGAGCCGTCCTGACCTGTGATACCGGT 907 >seq19645 Length=690 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || ||||| || ||||||||||| || | |||||| | ||||| || | ||| Sbjct 323 GTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCGAGTGTGCGGCCATCCTCGAGCTG 264 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||||||||||||||| || || || ||||| || ||||||||||||||||| || ||||| Sbjct 263 CTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTT 204 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| || || ||||| | || || || | |||||||| || || || Sbjct 203 CGCCTTGACATTGTCAATCGTGTCGGAGCTCTCCACCTCGAGCGTGATGGTCTTCCCGGT 144 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| |||||||| Sbjct 143 AAGGGTCTTCACGAAGATCTGCAT 120 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || || | Sbjct 574 CCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 515 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||||||||| || || || || || ||||| || ||| Sbjct 514 AGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGA 455 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||||||||||||| ||||| ||||| | || || Sbjct 454 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTATCGATCGTGTCGGAGCTCTCCACC 395 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || || || ||||| ||||| |||||||| Sbjct 394 TCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 348 Score = 102 bits (112), Expect = 2e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||||| |||| ||| || |||||||||||||||||||| || || | | Sbjct 118 CCACCACGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCG 59 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGG 68350 || |||| || || || | ||||||||||||||| || || || || ||||| || Sbjct 58 AGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGG 3 >seq14623 Length=969 Score = 143 bits (158), Expect = 5e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| | ||||| ||||| |||||||| ||||||| || || || ||||| || Sbjct 698 ACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCTACCATCCTCG 639 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || || | | || ||||| || |||||||| || ||||| || Sbjct 638 AGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGG 579 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| || || || || | || |||||||||||||| || ||| Sbjct 578 ATCTTGGCCTTGACATTATCAATAGTATCCGAGCTCTCAACTTCCAAGGTGATCGTCTTT 519 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || || |||||||| Sbjct 518 CCAGTGAGGGTTTTAACAAAAATCTGCAT 490 Score = 138 bits (152), Expect = 2e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || |||||||| || || ||||| || ||||||| || || | |||||||| | Sbjct 241 CAAGATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCATCTTCCA 182 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || ||||| || | |||||||| || |||||||||||||| || || | Sbjct 181 GCTGCTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCCTTCCTTATCCTGGA 122 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | |||||||| || || |||||||| | || ||||| | |||||||| || | Sbjct 121 TTTTTGCCTTTACATTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATGGTCTTGC 62 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || |||||||| || ||||| Sbjct 61 CGGTAAGAGTTTTGACGAAGATTTGCAT 34 Score = 116 bits (128), Expect = 7e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || ||||| || || || || || | || || | |||||||| | ||| || || Sbjct 914 GTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCGAGCTGTTTTCCA 855 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || || | || ||||| || || |||||||||||||| || ||||| ||||| Sbjct 854 GCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGTATCTTAGCCTTC 795 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || ||||||||||| | || |||||||| || ||||| || || || ||||| Sbjct 794 ACATTGTCGATGGTGTCCGAGCTCTCCACTTCCAAAGTAATGGTCTTACCTGTTAGGGTT 735 Query 68445 TTGACGAATATCTGCAT 68461 ||||| || |||||||| Sbjct 734 TTGACAAAGATCTGCAT 718 Score = 114 bits (126), Expect = 2e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || || || ||||| || || || || | || || | || ||||| | |||| Sbjct 464 TGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGCCAGGGTTCGGCCGTCTTCGAGCTGC 405 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || ||||| ||||| || | ||| ||||| || || || ||||||||||| || ||||| Sbjct 404 TTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGGGATTCCTTCCTTGTCCTGGATCTTG 345 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 || || || || ||||| || | || |||||||| || || || || || || Sbjct 344 GCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAACGTTATCGTCTTACCAGTC 285 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| |||||||| Sbjct 284 AGGGTTTTGACGAAGATCTGCAT 262 >seq34320 Length=242 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||| | || | ||||| || | |||||| || ||||| || Sbjct 1 TTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 60 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || || || ||||| || || |||||||||||||| || ||||| ||||||||| ||| Sbjct 61 AGCCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 120 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||| | || || || | |||||||| || || ||||||||||||||||| Sbjct 121 ATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAG 180 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 181 ATCTGCAT 188 >seq31848 Length=311 Score = 141 bits (156), Expect = 2e-28 Identities = 123/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| || | ||| || || || || || |||||||||||||||| | Sbjct 182 CCACCACGCAGACGCAAGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCG 123 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||||||||| || |||||||| || || || || ||| Sbjct 122 AGTGTTCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATGAGTCTCTGCTGATCTGGAGGA 63 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || |||||||||||||||||||| ||||| ||| Sbjct 62 ATACCTTCCTTGTCTTGAATCTTAGCCTTCACG 30 >seq32362 Length=298 Score = 140 bits (154), Expect = 6e-28 Identities = 180/247 (73%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 68216 TATGATGTGATTTT-AATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTT 68274 |||| || |||||| || || || || || ||||| || | ||| || || || || | Sbjct 252 TATGTTGAGATTTTCAACACCCACCACGCAGACGCAAGACAAGGTGAAGTGTAGATTCCT 193 Query 68275 TTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGA 68334 | |||||||||||||||| || || | |||||| || | ||| || || || ||||||| Sbjct 192 TCTGGATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGTTTACCAGCAAATATGA 133 Query 68335 GTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGA 68394 | || || || || |||||||| ||||||||||| ||||| || || || ||| || | Sbjct 132 GCCTCTGCTGATCAGGTGGAATCCCTTCCTTGTCCTGAATTTTCGCTTTTACGTTATCAA 73 Query 68395 TGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 | || || | || || |||| ||||| || || || || | ||||| || |||| Sbjct 72 TCGTATCGGAGCTCTCAACCTCCAGTGTGATAGTCTTGCCTGTCAACGTCTTCACAAATA 13 Query 68455 TCTGCAT 68461 ||||||| Sbjct 12 TCTGCAT 6 >seq25614 Length=477 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | ||||| || || || || || ||||| || || ||||| | Sbjct 44 CCTCCTCTTAGACGAAGCACCAAATGCAGGGTCGATTCCTTTTGAATATTGTAATCAGCC 103 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||||| ||||| || | |||||| || ||||| || || || || ||||| || ||| Sbjct 104 AAGGTCCTGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGA 163 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||||||| || |||||||| | || ||| Sbjct 164 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGCTCTCAACT 223 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || ||||| || || || || || || || ||||| Sbjct 224 TCCAATGTAATTGTCTTTCCAGTTAGTGTTTTTACAAAGATTTGCAT 270 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || ||||| |||||||| ||||||| || || | || || || | ||| Sbjct 295 GTGGAGGGTAGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCAAGCTG 354 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || || | || |||||||| || || ||||||||||| || ||||| Sbjct 355 CTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTT 414 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || || || || |||||||| | || ||||| | |||||||| || || || Sbjct 415 AGCTTTAACATTGTCAATGGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTCTTACCGGT 474 Query 68438 GAG 68440 ||| Sbjct 475 GAG 477 >seq20474 Length=655 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | || | ||| || |||||||| || || |||||||| |||| Sbjct 98 CCTCCCCTCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 157 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||||||| || || ||||| || || ||||| ||||| Sbjct 158 AAGGTGCGGCCATCTTCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 217 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||||| || || || || || | ||||| Sbjct 218 ATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCTACC 277 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||||||||| || || |||||||| Sbjct 278 TCGAGAGTGATTGTCTTACCAGTGAGGGTCTTCACAAAAATCTGCAT 324 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| ||||||||||| || ||||| || || || | | || | |||||||| Sbjct 344 ACCAGGTGGAGCGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTGCGGCCATCTTCA 403 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| ||||| || || ||||| || || || || |||||||| || Sbjct 404 AGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 463 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||| || ||||| ||||| | || || || | ||||||||| || Sbjct 464 ATCTTGGACTTTACATTATCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTCTTG 523 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| ||||| || ||||| Sbjct 524 CCGGTAAGGGTCTTAACGAAGATTTGCAT 552 >seq79 Length=34262 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||| | ||| | ||| ||||||||| ||| || | || || | ||| || ||||| Sbjct 19387 GTGCGTAATCATTACCACACCGCCGTTGAACTCCTTGATAGCCGAAGCAAGAGCACCAAG 19446 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 || |||||||||||| |||||||||||||||| || | | || ||| ||| | |||| Sbjct 19447 AGAGTCGCGGTCAAGGTAGTTCGTCGGCTCATCAAGCACCAGAATGTGCGGGTTCAGCCA 19506 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || ||| || | | ||||| |||||||||||| || ||||| || ||||| || || || Sbjct 19507 CATGGCAGCGGCCAGCACCACCTTCACCTTCTGGCCACCAGACAGACCGCGCATGCGTGA 19566 Query 224629 GTGAGTCGTGAATTCGGGGTCAAGACCAA 224657 |||||| |||||| | | | | ||||| Sbjct 19567 GTGAGTGCCGAATTCAGCGCCCAAACCAA 19595 Score = 127 bits (140), Expect = 4e-24 Identities = 437/672 (65%), Gaps = 32/672 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||| |||||||| || | ||| |||| || |||||| ||||||||||| Sbjct 19931 CGCCACTGAATGTACTGATTCGCCGTCTCATCCAAATGAGACTCAATGTGGTGGAAAGCG 19990 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || || ||||| | ||||| || ||||||||||| || | ||||| Sbjct 19991 TGCTGAGCAACATACGCAAAACGCATCGAAGGGTGCTTCCACACCTGTCCGCTCGTCGGC 20050 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | ||||||| || | | |||||| ||||| | ||| || |||||||| || || | Sbjct 20051 TCAACCTCGCCAGTCAACATCTTGATCAGCGTCGACTTACCAGCACCATTCGGACCCAGA 20110 Query 225161 ACGCCAATCCGGGATGACATTGCA-ACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCC 225219 || |||| || |||| || || | || | |||| ||| || | ||| Sbjct 20111 ACAGCAATACGACTCGACAGAGCGCACGTCACAGAA-ATGTTGTTGA---TCG-ACGGC- 20164 Query 225220 AGTTTGGTAAGCAAAGGCCACGCCACG--CAGCT--TCA------TGATGGCACGGTCCT 225269 || || || | || | ||| ||| | ||| | || | | ||| Sbjct 20165 --TTCGGCGTGCCAGGGTACTGGTACGAGCAGTTCGTCAGACGAATAATAGGCTTGCCCT 20222 Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC-- 225327 || | || | | ||||| || ||||| ||||| |||| ||| || Sbjct 20223 TGTTCTTGATGTCAGCAAGGAAACCCGGCTCCGGGAAAGTGAACTT---CACGTTCTCTG 20279 Query 225328 -CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 || ||| |||||||| | ||||| ||| || | |||| || || ||||||| Sbjct 20280 ACTCCAGCTCGTAGTATGCCTTGGCCTCCGGTTTCTGTTCCACAAACTTTGAAAGGTTTC 20339 Query 225387 CGAGGTGCTTCGTGAGCTT--GAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC 225444 | || || | ||||| ||| ||||||| |||| ||| | |||||| | Sbjct 20340 CCTTGTAGATCTTCAGCTTACGAG-----TCTCGTAGTGAATAATGTTGGTGCACACCGT 20394 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504 ||| | ||||||||||||||||||||| ||||| |||| ||| ||||||| | | | || Sbjct 20395 GTCCAAGAAGCCAGAGTCGTGGGACACCATGATTGACGTCACATTCGTCAAACTCGTCAG 20454 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 || | | ||| |||||||| | ||||||| |||||| || || || || ||||| Sbjct 20455 GTAGTTCTCCAACCACGCCACGTTCTTCACGTCCAAGTGGTTCGTCGGCTCATCGAGAAG 20514 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 || ||||||||| | || ||||| || | || || ||||| ||||| || || Sbjct 20515 CAAGATGTCAGCCTTCTGAAGCATGGCACGGGCCAGCTCCAATTTCATCTTCCAACCACC 20574 Query 225625 GGACAGGGAGCC 225636 || || | ||| Sbjct 20575 AGAAAGAGTGCC 20586 >seq34564 Length=234 Score = 129 bits (142), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 68281 TGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTT 68340 |||| || || | || |||||||| || || | |||||| || || || || || || | Sbjct 234 TGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCT 175 Query 68341 GTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGT 68400 | ||||| || || ||||| |||||||| || ||||| ||||| ||| |||||||||| Sbjct 174 GCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGT 115 Query 68401 CTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 | | || || || | ||||||||| || || |||||||||||||| || ||||||| Sbjct 114 CCGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCA 55 Query 68461 T 68461 | Sbjct 54 T 54 >seq7414 Length=1926 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 68238 CCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGT 68297 ||||| || || | || | ||| ||||| ||||| || || ||||| || ||| | Sbjct 1 CCGCGCAGACGAAGCACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAAC 60 Query 68298 GTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATG 68357 || | ||||| || | |||||| |||||||| || | | || ||||| || |||||| Sbjct 61 GTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGAATG 120 Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| |||||||| | ||| ||| ||||| | ||| | || || || || Sbjct 121 CCTTCCTTGTCCTGAATCTTCGTCTTCACGTTGTCGATCGAGTCCGACGACTCGACGTCA 180 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 181 AGAGTGATCGTCTTGCCCGTCAACGTCTTCACGAAAATCTGCAT 224 >seq1402 Length=7487 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 224516 CGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGCT 224575 ||||| ||| | ||||||||||||||||| | | | ||| || | | ||||| || Sbjct 6480 CGGTCCAGGTAATTCGTCGGCTCATCCAGTACCAACAAGTGCGGACGGTTCCACATTGCA 6421 Query 224576 GCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATC 224623 || ||| ||||||||||||||||||||| || || |||||||||||| Sbjct 6420 GCGGCAATCACCAGCTTCACCTTCTGACCACCCGACAGGCCGCGGATC 6373 >seq7057 Length=2016 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| |||||||||| ||||||| | |||||||||||| |||||| Sbjct 1955 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCCTGTGGTCGTGGGCTCGAGC 1896 Query 84516 CCCAC 84520 ||||| Sbjct 1895 CCCAC 1891 >seq135 Length=29154 Score = 84.2 bits (92), Expect = 4e-11 Identities = 286/436 (66%), Gaps = 10/436 (2%) Strand=Plus/Minus Query 176088 CCTGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTAT 176147 || || || || ||| || ||||| || || || | || ||| | |||||||| || Sbjct 14295 CCCGTACCAATACCTTCAGAGCCATTGACAAGTAGCATTGGAATGATAGGAACATAATAC 14236 Query 176148 TCCGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGC-TCGTCGGCCTT 176206 | ||||||| | ||||| || ||| ||| |||| |||| ||||| ||| Sbjct 14235 ACGGGTTCAACTGGAAACCCGTCGTCGTCGGCGTAACGAAGCA-ACGCATCGTCTTCCTC 14177 Query 176207 GTGGAAAATATC--CCGGGTGT-TGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGC 176263 | ||||| | |||||||| | || || || || |||||||| | || | || Sbjct 14176 AGG--AAATACCAACCGGGTGTGTTTCTGA-AGCTGCGTAAAGATATAACGAGGACTGGC 14120 Query 176264 ACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGAT 176323 | || || ||||| || | ||||| |||||||||||| ||| |||| | || Sbjct 14119 AGCATCTTTACCTCCTTGTAAGCGGGTACCGAATTGTCCTGATGGATACAGCAG-TGGAA 14061 Query 176324 G-TTATTCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCT 176382 | ||||| || |||||| | || || ||||| ||| || | || | || || | Sbjct 14060 GATTATTGGATCCCACGAAATCCTGTGCCATATTGACGATTGTCGAATGCAACGAAGCTT 14001 Query 176383 CGCCGTGGTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTT 176442 | || || ||||| | | | ||||| ||| || || ||||||||||| || | || Sbjct 14000 CACCATGATGATAAGCTGTATGTTCACTGCAGTAACCCGCCAACTGCGCGACCTTCACTT 13941 Query 176443 CTTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGAC 176502 | | || || |||||||| | ||| || | ||| |||||||| ||| || | Sbjct 13940 CACTAATCAGCTTTCGCTTCAAGCAGGCGAAAAGCACCTTACGCTGCGAAATCTTGAGGC 13881 Query 176503 CATCGACGACCGACGG 176518 |||| || || || || Sbjct 13880 CATCAACAACTGATGG 13865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921212980769080