Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7414 143 6e-29 seq25614 140 8e-28 seq20474 134 3e-26 seq19645 125 2e-23 seq14623 125 2e-23 seq28136 118 2e-21 seq34320 104 6e-17 seq31848 104 6e-17 seq121 104 6e-17 seq34564 98.7 2e-15 seq27836 98.7 2e-15 seq2166 96.9 8e-15 seq31347 87.8 4e-12 >seq7414 Length=1926 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || ||||||||||| || | ||||||||| ||| || | ||||| Sbjct 13 AGCACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAACGTGCGGCCATCC 72 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||| || | |||||||||||| ||| ||| ||||| ||| Sbjct 73 TCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 132 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| | ||| | | || || || | ||||||||| Sbjct 133 TGAATCTTCGTCTTCACGTTGTCGATCGAGTCCGACGACTCGACGTCAAGAGTGATCGTC 192 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || ||||| ||||| || Sbjct 193 TTGCCCGTCAACGTCTTCACGAAAATCTG 221 >seq25614 Length=477 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || ||||| |||||||| | ||||| |||||||| ||||| ||||| ||||||||| Sbjct 68 TGCAGGGTCGATTCCTTTTGAATATTGTAATCAGCCAAGGTCCTGCCATCCTCCAGCTGC 127 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || |||||||| || | ||||||||| || ||||||||| ||||| ||||| Sbjct 128 TTACCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTG 187 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | |||||| | | || || ||||| || || ||||| || || Sbjct 188 GCCTTGACGTTGTCAATGGTGTCCGAGCTCTCAACTTCCAATGTAATTGTCTTTCCAGTT 247 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| ||||| Sbjct 248 AGTGTTTTTACAAAGATTTG 267 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || || || || |||| |||||| || || | || | || || Sbjct 287 AGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCCGTCC 346 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| |||||||||||||| || || ||||| ||| Sbjct 347 TCAAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCC 406 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || || | |||||| | | || || || | ||||| ||| Sbjct 407 TGGATCTTAGCTTTAACATTGTCAATGGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTC 466 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 467 TTACCGGTGAG 477 >seq20474 Length=655 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| |||| |||||||||||||| || | |||||| Sbjct 341 AGGACCAGGTGGAGCGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTGCGGCCATCT 400 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||| | |||||||||||| ||||| || ||| Sbjct 401 TCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 460 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | ||||| ||| Sbjct 461 TGGATCTTGGACTTTACATTATCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTC 520 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 521 TTGCCGGTAAGGGTCTTAACGAAGATTTG 549 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| || | ||| ||||| ||||| || | |||||| Sbjct 113 AGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCT 172 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| | ||||||||| || ||||| || || Sbjct 173 TCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 232 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | || || | | ||||| || | ||||| ||| Sbjct 233 TGGATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCTACCTCGAGAGTGATTGTC 292 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || Sbjct 293 TTACCAGTGAGGGTCTTCACAAAAATCTG 321 >seq19645 Length=690 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || ||||||||||| |||| ||||||||| || | || | ||||| Sbjct 559 AGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCC 500 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| || | ||||||||||||| ||| || || ||| Sbjct 499 TCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC 440 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| |||| ||||| | | || || || | || || ||| Sbjct 439 TGGATCTTTGCCTTGACGTTATCGATCGTGTCGGAGCTCTCCACCTCGAGGGTTATGGTC 380 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 379 TTCCCGGTCAGCGTCTTCACGAAGATCTG 351 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || || |||||||| ||||||||||| |||| ||| ||||| || | || | Sbjct 337 AGCCTGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCGAGTGTGCGG 278 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| |||||||| || || | |||||||||||| ||| ||||| Sbjct 277 CCATCCTCGAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCC 218 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| || || | ||||| | | || || || | |||| Sbjct 217 TTGTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCGGAGCTCTCCACCTCGAGCGTG 158 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || || || Sbjct 157 ATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTG 123 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || |||||||| || ||||| ||||||| |||||||||||| | ||| Sbjct 112 CGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCGAGGGTC 53 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| ||||||||||| || | |||||||||||| Sbjct 52 CGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGG 3 >seq14623 Length=969 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| | || || || || |||| |||||| || || | || || ||||| Sbjct 701 AGGACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCTACCATCC 642 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||| ||||| | |||||||||||| || ||| || ||| ||| Sbjct 641 TCGAGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCC 582 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | || || | | || || ||||| ||||||||| Sbjct 581 TGGATCTTGGCCTTGACATTATCAATAGTATCCGAGCTCTCAACTTCCAAGGTGATCGTC 522 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| |||||||| || Sbjct 521 TTTCCAGTGAGGGTTTTAACAAAAATCTG 493 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| ||||| || || | || | |||||| Sbjct 245 AGGACAAGATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCATCT 186 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| || || || |||||||| |||||||| ||| ||||| ||| Sbjct 185 TCCAGCTGCTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCCTTCCTTATCC 126 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || ||| ||| || || | |||||| | | || || || | ||||| ||| Sbjct 125 TGGATTTTTGCCTTTACATTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATGGTC 66 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||| || || ||||| Sbjct 65 TTGCCGGTAAGAGTTTTGACGAAGATTTG 37 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || || |||||||| | |||||||| |||| || | || ||| Sbjct 473 AGGACGAGATGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGCCAGGGTTCGGCCGTCT 414 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||| || || ||||| |||||||| || |||||||| ||| Sbjct 413 TCGAGCTGCTTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGGGATTCCTTCCTTGTCC 354 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || || | ||| || | | || || |||||||| |||||| Sbjct 353 TGGATCTTGGCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAACGTTATCGTC 294 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| || || || || Sbjct 293 TTACCAGTCAGGGTTTTGACGAAGATCTG 265 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || | || || || || || | ||||||||||| | || | |||||| Sbjct 929 AGGACAAGATGCAAGGTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCT 870 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| ||||| || ||||| || ||||||||||| || || ||||| ||| Sbjct 869 TCGAGCTGTTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 810 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || ||||| || || ||| Sbjct 809 TGTATCTTAGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACTTCCAAAGTAATGGTC 750 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| ||||| || || Sbjct 749 TTACCTGTTAGGGTTTTGACAAAGATCTG 721 >seq28136 Length=407 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| ||||| |||||||| | || ||||| || || | |||||| || |||| ||| Sbjct 232 CGAAGCCTCAGCACAAGGTGCAAGGTTGACTCTTTCTGAATGTTGTAATCCGCCAGAGTG 173 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| |||||| || || || || ||||| |||||||| || || ||| Sbjct 172 CGTCCATCTTCCAACTGCTTGCCCGCAAATATCAGACGTTGCTGGTCGGGCGGGATCCCT 113 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| || || |||||| |||| || || | |||| || || || Sbjct 112 TCTTTGTCCTGGATTTTGGCCTTCACATTGTCGATTGTATCGCTGCTTTCAACTTCTAAG 53 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || || || || || || || Sbjct 52 GTTATGGTCTTGCCCGTCAGGGTCTTTACGAAGATCTG 15 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || || || || |||||||||||||||||| | ||| |||| ||||||||| | ||| Sbjct 138 CTGATATTTGCGGGCAAGCAGTTGGAAGATGGACGCACTCTGGCGGATTACAACATTCAG 197 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||| || | |||||||| |||| ||||| Sbjct 198 AAAGAGTCAACCTTGCACCTTGTGCTGAGGCTTCG 232 >seq34320 Length=242 Score = 104 bits (114), Expect = 6e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 || |||| ||||||||| ||||| || | ||||| || |||||||| || |||||||| Sbjct 1 TTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 60 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561 || | |||||||||||| || ||||| ||||| ||||| ||| ||| ||| Sbjct 61 AGCCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 120 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | |||||| | | || || || | ||||| ||||| || ||||| || || || || Sbjct 121 ATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAG 180 Query 199622 ATTTG 199626 || || Sbjct 181 ATCTG 185 >seq31848 Length=311 Score = 104 bits (114), Expect = 6e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || |||||||||||| || || ||||| |||| ||| || || || | || Sbjct 176 CGCAGACGCAAGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCGAGTGTT 117 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| ||||| |||||||| | |||||| || ||| ||| ||| Sbjct 116 CGGCCATCCTCCAGCTGCTTCCCGGCAAAGATGAGTCTCTGCTGATCTGGAGGAATACCT 57 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACG 199555 || || |||||||| ||||||| Sbjct 56 TCCTTGTCTTGAATCTTAGCCTTCACG 30 >seq121 Length=30622 Score = 104 bits (114), Expect = 6e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| | |||||||| || |||| |||||| || |||| || Sbjct 21090 CGCAGACGCAGCACGAGGTGCAACGTCGACTCTTTCTGGATGTTGTAATCCGCCAGAGAG 21149 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || |||||||| |||||||||||||| || ||||||| Sbjct 21150 CGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATTCCT 21209 >seq34564 Length=234 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 ||||||||| || | ||||| || || || |||||||| || || ||||| || | ||| Sbjct 233 GTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCTG 174 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 |||||||||| || || || ||||| ||||| ||||||| |||| |||||| Sbjct 173 CTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTC 114 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | || || || | ||||| ||||| || ||||| || || ||||| || || Sbjct 113 CGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAGATCTG 57 >seq27836 Length=415 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||| ||||| || | ||||| || |||| ||| | |||||| Sbjct 169 AGCACCAGGTGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCCAGAGTACGACCATCT 110 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| | | ||||||||| || |||||| || ||| Sbjct 109 TCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCAGGTGGAATTCCCTCCTTGTCC 50 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 || ||||| |||||| || | |||||| | |||| || |||| Sbjct 49 TGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAGCTTTCCACTTCCA 1 >seq2166 Length=5462 Score = 96.9 bits (106), Expect = 8e-15 Identities = 135/188 (72%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||||||| | | || | ||||| || |||||||| ||||| || Sbjct 773 CCTTTCTGGATGTTGTAGTCCGAAAGCGTTCGGCCATCCTCGAGCTGCTTGCCGGCAAAA 832 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || || ||||||||||| || ||| ||||| ||||| || || ||||| || Sbjct 833 ATCAGGCGCTGCTGGTCAGGCGGAATACCTTCCTTTTCCTGGATTTTCTGCTTGACATTG 892 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | | ||| | | || || ||||||||||| ||||| || || || || |||||| Sbjct 893 TCAATGCAGTCGGACGGCTCCACGTCCAACGTGATGGTCTTGCCGGTCAGGGTCTTCACA 952 Query 199619 AAAATTTG 199626 || || || Sbjct 953 AAGATCTG 960 >seq31347 Length=324 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||| ||||| || | |||||| || || | || | || || Sbjct 201 AGGACAAGGTGGAGGGTCGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGCCCGTCC 260 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| || | |||||||||||| Sbjct 261 TCGAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178384785786113