Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq16087 98.7 1e-15 >seq16087 Length=871 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 51218 GTGGAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCG 51277 || |||||||| ||||| | ||||| |||||| |||| |||||||| || |||| || Sbjct 104 GTTGAAGGTGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACGCTGATGGACGCC 45 Query 51278 GTTGAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTC 51321 ||||| || |||||||||||||||||| | || || ||||| || Sbjct 44 GTTGAGCACCCTGAAAAATACCCACAGCTGACCATTCGTGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557819285622240