Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq8878 430 1e-114 seq3663 300 1e-75 seq14357 226 2e-53 seq11257 140 2e-27 seq16146 123 2e-22 seq1324 123 2e-22 seq6757 111 1e-18 seq8376 104 2e-16 seq5137 89.7 4e-12 seq250 86.0 5e-11 >seq8878 Length=1618 Score = 430 bits (476), Expect = 1e-114 Identities = 1002/1490 (67%), Gaps = 41/1490 (3%) Strand=Plus/Plus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 |||||| | |||| || || || |||||||||||||| | ||||| || || Sbjct 6 TTTATCCTCAGCAGAGACGTTCAGGATACCATTGGCATCAATGTCAAAGCAAACAGTGAT 65 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 ||||| || || || ||||||| || || || ||| | ||| | |||| | ||| Sbjct 66 CTGAGGCACACCCCTTGGAGCAGGAGGAATACCAGACAACTCAAACTTACCCAAAAGATT 125 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || ||||| | || |||||| || || | |||||| || ||| ||||| Sbjct 126 GTTGTCCTTAGTTCTTGCTCTTTCACCTTCAAATACTTGGATCAAGACACCAGGCTGATT 185 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----AT 517484 || || || || | || ||| ||| || |||||| |||||||| || || Sbjct 186 GTCAGAGTATGTGGAGAAGACTTGTTCTTTCTTCGTAGGAATCGTTGTGTTCCTCGGGAT 245 Query 517485 CAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT 517544 ||| || | ||||| | || || || ||||| || || || || || |||||||| | Sbjct 246 CAA-AACA---GTCATCACTCCTCCGGCAGTTTCCAATCCTAGTGACAGGGGAGTGACGT 301 Query 517545 CAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAA 517604 ||| || | || | ||| | || |||| || ||| ||||| || ||||||| Sbjct 302 CAAGAAGCAAAAGGTCTTGCACCTTCTCATTTCCTTCTCCACTTAGAATTGCAGCTTGAA 361 Query 517605 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 517664 ||||||||||| |||||||||||||| ||||| | | | | || | ||||||| Sbjct 362 CCGCAGCACCATAAGCAACAGCTTCATCGGGATTGATACTCTTGCAGAGCTCCTTACCAT 421 Query 517665 TGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAAT 517723 |||| |||| || || || ||| || || || ||||| | |||||||| || | Sbjct 422 TGAAGAAATCCTGCAACAA-TTGCTGCACTTTCGGGATACGGGTAGATCCTCCCACAAGC 480 Query 517724 ACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG 517782 |||| ||||| | | ||| | ||||||| || | |||| ||| || ||||| || Sbjct 481 ACAACATCATG-AACAGTGCTCTTATCCATCTTGGCATCCCTCAAACACTTCTCAACAGG 539 Query 517783 TTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT 517842 || | | ||||||| || || || || ||| | || ||||||| || Sbjct 540 CTCCATGCATTTCCTAAACAGATCCATGTTGAGCTCCTCAAATCTGGCCCTAGTAATGGT 599 Query 517843 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 | | | |||||||||||||| |||||||||||| ||||| ||||| |||| | || Sbjct 600 GGAGTAAAAATCAATTCCTTCGTACAAAGAATCAATCTCAATGGTAGTCTGAGCAGTTGA 659 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 517962 ||| | | | ||||| | |||||| ||||| || | || | | |||| |||| | Sbjct 660 AGACAACGTTCTCTTAGCCCTTTCACAGGCTGTTCTCAACCTCCTAAGGGCTCTTGC--A 717 Query 517963 TTGATTC--AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAA 518018 || | | | |||| | ||||||||||| || || || | | | | ||| | || | Sbjct 718 CTGCTACCAAGATCTTTCTTATATTTTCTTTTAAATTCCTGAGTAAA--ATGGTTAACTA 775 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 ||||||||||| |||||||| ||||| | |||| ||||| ||| || | || | | Sbjct 776 ACCGATTATCAAAGTCTTCACCACCCAAATGGGTATCTCCTGCCGTGGCCTTGACCTCAA 835 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | || ||||||| || || |||| |||||| ||||| || || | |||||||| Sbjct 836 AGATACCCTCTTCAATAGTTAATAGAGAAACATCAAAAGTTCCCCCTCCTAGATCAAAAA 895 Query 518139 TAAGTACATTCATTTCT-------TTGTCTTG-GTTTTTATCAAGACCATACGCAAAAGC 518190 | | ||||| ||||| || | || || || || ||||| |||| || Sbjct 896 TCAAAACATT--TTTCTCACCAACAGAGCTAGCCTTCTTGTCCAGCCCATAAGCAATTGC 953 Query 518191 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 518250 || ||||||||||| || || ||||||| ||||| || |||| ||| || ||||| Sbjct 954 GGCTGCAGTTGGTTCGTTGATGATTCTCATCACATTTAGTCCAGAAATGACGCCGGCATC 1013 Query 518251 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGT 518310 || || || || || || || || || ||||||||||| || |||| ||| || | | Sbjct 1014 CTTTGTAGCCTGCCTCTGAGAGTCATTGAAATATGCAGGGACTGTAACAACAGCGTTCTT 1073 Query 518311 TACTTCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368 | | |||| ||| ||||| || | | ||||||||| | | || ||| || Sbjct 1074 GATGGTGGTTCCAAGATA--CGCTTCAGCAATCTCCTTCATTTTAGTCAGAACCATCGAA 1131 Query 518369 GAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAA-AATATGG 518427 ||||||| |||| | ||||||| ||| || || | || ||| ||| || Sbjct 1132 GAAATTTCCTCTGCAGCGAATTGCTTTTCTTCTCCTTTGTAAGTAACAACAATCATA-GG 1190 Query 518428 TTTATTACC---AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT 518484 || | | || ||| ||||| || ||||| | ||||| || || || | Sbjct 1191 CTTCTCCGCTGGCCCAGAAATGACTTTGAAGGGCCACAACTTCATGTCATTCTGGACTGT 1250 Query 518485 TTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGAT 518543 | | || | ||||| || ||||| | || |||||||| |||| || ||||| |||| Sbjct 1251 TGGATC-GGAGAATCTCCTTCCAATAAGACGCTTTGCATCGAAAACTGTGTTGGTGGGAT 1309 Query 518544 TAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAA 518603 | || || |||||| |||||| |||||||| ||||| | ||||| || || || | | Sbjct 1310 TCATGGCGACTTGATTTTTGGCGGCATCTCCGATCAGCCGCTCTGTGTCGGTGAAAGCTA 1369 Query 518604 CATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 518663 |||| |||||||| || ||||| || ||||| || |||||||| || || ||| || Sbjct 1370 CATAAGATGGAGTAGTCCGATTTCCCTGATCGTTGGCAATAATCTCCACCCGGTCATGTT 1429 Query 518664 GCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 |||| || ||||| || | | || ||||| | ||| || || |||||| Sbjct 1430 GCCACACTCCTACGCAGGAATATGTGGTTCCAAGATCGATTCCGATAGCA 1479 >seq3663 Length=3564 Score = 300 bits (332), Expect = 1e-75 Identities = 984/1513 (65%), Gaps = 31/1513 (2%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| ||||| ||||| || || |||| | ||||| || | || | |||||| | Sbjct 2695 ATTGGTAATCGTAATCTTGTTCTCTTTGCCGCTCGATTTCTCCACCGCCGACACATTCAA 2636 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA-- 517330 ||| ||||| |||| | |||||| || || ||||||||||| || ||||| || ||| Sbjct 2635 AATCCCATTCACATCAATATCAAACGTCACGTCAATTTGAGGCACACCTCT-TG-GCATG 2578 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 || || || || |||| ||||| | |||||| || |||||| | || | || Sbjct 2577 GGCGGTATACCATCCAGGTTAAACTTGCCCAGAAGATGATTATCGTGCGTCATCGAGCGC 2518 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || || || | ||| || || ||| || ||||| | ||| || | ||| | Sbjct 2517 TCGCCTTCAAACACTTGAATCAATACACCAGGCTGGTTATCAGCATACGTCGAGAATGTT 2458 Query 517451 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 || || || ||||| || || || | ||| | || ||||| | |||||| Sbjct 2457 TGCGACTTCTTCGCAGGAACCGTAGTATTACGTGGAATGAGTTTCGTCATCACTCCACCT 2398 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570 ||||| || || ||||| || | |||| ||||| | || | | || || | || Sbjct 2397 GCTGTCTCCAAGCCAAGCGACAACGGAGCTACATCCAACAGCAACAAATCCTGCAACTTG 2338 Query 517571 TCA------TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | ||| | |||| | | ||| || ||||| | || ||| ||||| || ||| Sbjct 2337 GAAGATGACTCACT---ACCACCCAAAATTGCAGCTTGCACAGTAGCTCCATAAGCCACA 2281 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 ||||| || ||||||| | | | | ||| ||||||||||| | | | Sbjct 2280 GCTTCGTCTGGATTAATCGACTTGAACAACTCTTTCCCATTGAAAAAGTCCATCAACAAC 2221 Query 517685 TGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 517744 || || || ||||| |||| || || ||||| || |||| ||||| |||||| Sbjct 2220 TGCTGCACTTTTGGAATTCGAGTCGAACCACCAACCAACACAACTTCATTCACCTGACTC 2161 Query 517745 TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAG 517804 || ||| || | || ||| |||| |||||||||| | | | ||| || Sbjct 2160 TTGGACAGCTTGGCGTCGCGTAACACTTGAGCAACGGGTTCCATCGTCTTGCGAAAGAAA 2101 Query 517805 TCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCG 517864 | ||| ||||| |||||| |||| |||| || ||| ||||||| ||||| Sbjct 2100 CTTCCACACAGTTCCTCGAATCGCGCTCGGGTAATCGTCGAGTTAAAATCAATACCTTCA 2041 Query 517865 AACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 517923 ||| | ||| | ||||| ||| | ||||| ||||| ||||| | || || || || Sbjct 2040 TACAGCGTATCGATCTCAAT-GTACGCTTGAGCCGAAGCAGATAAAGTTCGCTTTGCTCG 1982 Query 517924 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCTGTTTTA 517981 ||||| ||||| | || | ||| | || ||||| | | || |||| | Sbjct 1981 CTCACAAGCTGTGCGAAGGCGTCGAAGCGCAC--GCTGACTTGTCGCCATATCTTTACGG 1924 Query 517982 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 518041 ||||| | ||| || || | ||| | | ||||| |||| ||||||||||||||| Sbjct 1923 TATTTGCGCTTAAACTCCGCCACAAAGTACTCCACAAGTTGATTGTCAAAATCTTCACCT 1864 Query 518042 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 518101 |||| | || | || | ||| ||| | |||| || | || || |||| | ||| Sbjct 1863 CCCAGATGTGTGTCACCAGCCGTGGCTTTCACTTCAAAGATGCCGTCCTCAATACTCAAT 1804 Query 518102 AGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 518161 || | |||||| || || ||||| | |||||| || || ||||| |||| | Sbjct 1803 AGCGACACATCAAACGTACCGCCACCAAGATCAAAGATCAGCACATTGTGTTCTCCACCC 1744 Query 518162 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221 | || | || | ||| || || | |||||||||||||| || ||||| || | | Sbjct 1743 T---TTCTGTCCAAACCGTAGGCGATCGCAGCAGCAGTTGGCTCGTTAATGATACGTAGC 1687 Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 518281 || || || |||||||| ||| |||||||| || || || | || || || || ||| Sbjct 1686 ACGTTCAGTCCAGCAATCACTCCAGCATCTTTCGTTGCCTGACGCTGCGAGTCATTGAAA 1627 Query 518282 TATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTT 518341 || |||||||| || | ||||||| | |||| ||| ||||| ||||| ||| | Sbjct 1626 TAAGCAGGAACCGTCACCACGGCATTCTTCACTTGTTTCCCAATGTAAGCCTCTGCAATC 1567 Query 518342 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGG--ATT 518399 | ||||||| | || | ||| || ||||| | ||| || | || ||| | | Sbjct 1566 TCGCGCATTTTAATCAACACCATGGACGAAATCTCTTCCGGTTGAAATGTCTTCGTCTCT 1507 Query 518400 CATTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACATTAATAACTTTAAATG 518456 | ||| ||| || || | | | || || ||| || || |||||||||| | Sbjct 1506 CCTTTCGAT-TG-CACCACTACTTGAGGCTTGTTATCAGGGCCACGCGTAACTTTAAACG 1449 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGT 518515 |||| | || || || || || || || || ||| | || | | || || || ||| Sbjct 1448 GCCAATGCTTAATGTCCGACTGCAC-CTCTGTGTCCGTGAATTTACGTCCGATCAAACGT 1390 Query 518516 TTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCA 518575 || ||||||| | ||||| | || || || |||| | || || ||||| ||| Sbjct 1389 TTGACATCAAAGACCGTATTATGCGCGTTCATGGCCACTTGGTTCTTAGCAGCATCACCA 1330 Query 518576 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 518635 || ||| | || || || || || | ||||| || || || || ||||| || || ||| Sbjct 1329 ATTAGACGCTCCGTGTCCGTGAACGCCACATACGACGGCGTGGTACGATTGCCCTGGTCA 1270 Query 518636 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 518695 || |||||||| || || | |||| ||||| ||||| || || | || || || Sbjct 1269 TTGGCAATAATCTCCACGCGATCATTCTGCCACACACCAACGCATGAGTACGTCGTACCC 1210 Query 518696 AAATCAATACCAA 518708 || ||||| |||| Sbjct 1209 AAGTCAATCCCAA 1197 >seq14357 Length=991 Score = 226 bits (250), Expect = 2e-53 Identities = 576/873 (66%), Gaps = 15/873 (2%) Strand=Plus/Plus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 || || ||||| |||||||||||| || || || || |||| | || || || | Sbjct 7 TCGATACCTTCATACAAAGAATCAATCTCTATAGTTGTCTGAGCAGTGGATGAAAGAGTC 66 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA 517972 | || || | |||||| || ||||| | ||||| || || | || | | | | Sbjct 67 CTCTTGGCCCTTTCACACGCGGTCCTCAATCTTCTCAAAGCCCTAGCACTACCACTAATA 126 Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAA 518032 || | || | || || || || || | ||| | | || | | |||||||||| Sbjct 127 TCCTTCTTGAACTTCCTTTTAAATTCCTGTACAAAGTGGTTAACCATCCTATTATCAAAA 186 Query 518033 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 518092 |||||||| |||| | || | || | |||| | |||| |||| || |||||| Sbjct 187 TCTTCACCACCCAGATGGGTGTCACCAGCTGTAGACTTCACTTCAAAAATACCCTCTTCA 246 Query 518093 AGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 518152 | || |||||| | |||||| ||||||||||||| ||| || || | |||||| || Sbjct 247 ATAGTCAAAAGTGAAACATCAAATGTTCCACCACCCAAATCGAAGATCAATACATT--TT 304 Query 518153 TCTT--------TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 ||| || | || || || | |||||| |||| |||||||||||| || | Sbjct 305 TCTCACCCACACTGCCAGCCTTCTTGTCCAAACCATAGGCAATAGCAGCAGCAGTAGGCT 364 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| || ||||||| ||||| | |||||||| ||| ||||| || || || || | Sbjct 365 CATTGATTATTCTCATCACATTCAACCCAGCAATCACTCCAGCATCCTTGGTAGCCTGCC 424 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 | || || || || ||||||||||||||||| | |||||||| ||| | ||||| Sbjct 425 TCTGGGAGTCATTGAAATATGCAGGAACAGTGACAACGGCATTCTTTATTGTGACACCAA 484 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 ||||| ||| | | |||| || |||| | ||| |||||||| | |||| | Sbjct 485 GGTAAGCCTCTGCAATCTCCCTCATCTTCATTAACACCATGGATGAAATCTCCTCTGCAG 544 Query 518385 AATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACA 518440 | ||||| || |||| || | || ||| || || | || | Sbjct 545 CGAACTGCTTCTCCTCGCCTTTGTAATTA-ACAACAATCATGGGCTTGTCGGCAGGCCCC 603 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 ||| | ||||| ||||| | || || || |||||| | |||| | ||| Sbjct 604 GGAATTAACTTAAAAGGCCACAACTTGATGTCACTCTGAACAGTAGTGTCACTGAAACGC 663 Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560 || ||||| |||| || |||||||||| |||||||| ||||| || || | |||| Sbjct 664 CTTCCAATCAATCTCTTGGCATCAAAAACGGTATTGGTAGGATTCATGGCGACCTGATTC 723 Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || || |||||||| || | || || || || || | ||||| || ||||| || Sbjct 724 TTTGCGGCGTCTCCAATGAGTCGCTCAGTATCAGTGAAAGCCACATAGGAGGGAGTGGTC 783 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 | || ||||| ||||| || || || || ||| | ||| ||||| || || || || Sbjct 784 CTGTTCCCTTGGTCATTGGCGATGATCTCCACTCTGTCATGCTGCCACACCCCAACGCAG 843 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | | || || || | ||| ||||| || ||| Sbjct 844 GAATACGTGGTACCGAGATCTATACCGATCGCA 876 >seq11257 Length=1275 Score = 140 bits (154), Expect = 2e-27 Identities = 382/578 (66%), Gaps = 8/578 (1%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| | |||||||||||||| | ||||| ||| |||||||| || ||||| Sbjct 675 ACATTCAAGATACCATTGGCATCAATGTCAAAGCACACTGTGATTTGAGGAACACCTCTG 734 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 ||||||||||||| || ||| | ||| | |||| ||| || ||| | || | Sbjct 735 GGAGCAGGTGGGATACCAGACAATTCAAACTTGCCCAACAAATTGTTGTCTCTTGTTCGT 794 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 ||| ||||| || | | ||| || ||| | | || || || || || || | Sbjct 795 GTTCTCTCACCTTCATACACTTGAATGAGAACACCGGGCTGGTTGTCCGAGTATGTAGAG 854 Query 517445 AATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || || ||| ||| || |||||| || || |||||| ||| | | ||||||| Sbjct 855 AAGAC-CTGCTCTTTCTTTGTAGGAATGGTAGTATTTCTAGGAATCAAAACAGTCATAAC 913 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| |||||||| || | |||||| || |||||| || |||| || | | | ||| Sbjct 914 ACCGCCTGCTGTCTCCAGACCAAGGGAGAGAGGATATACGTCAAGAAGTAACAGGTCTTG 973 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 || || |||| || || |||||||| || || | ||||||||||| ||||| Sbjct 974 AACCTTCTCATTGCCTTCTCCGCTTAGAATAGCAGCCTGCACTGCAGCACCATAGGCAAC 1033 Query 517624 AGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAG 517680 ||| ||||| || |||| | || || || | ||| ||||| || || | || || Sbjct 1034 AGCCTCATCGGGGTTAATGCTCTTGCA--GAGCTCTTTCCCATTAAAGAAGTCCTGCAAC 1091 Query 517681 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740 || ||| || || ||||| | || || || ||||| || |||| ||||| | Sbjct 1092 AA-CTGTTGCACTTTGGGAATTCTAGTAGACCCACCAACCAAAACAACATCATGGATAGA 1150 Query 517741 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAA 517800 |||||||| || | ||| ||| |||||||| || || | || | ||| || Sbjct 1151 GCTTTTATCCATCTTAGCATCTCTCAAACACTTTTCAACAGGCTCCATACACTTTCTGAA 1210 Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA 517838 | || | | ||||||||| |||||||||||| Sbjct 1211 TAGATCCATATTCAATTCTTCGAACCTAGCTCTAGTAA 1248 >seq16146 Length=868 Score = 123 bits (136), Expect = 2e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || |||||||| | |||||| | ||||| | |||| || | | | || |||| Sbjct 456 GTCCCACCACCAAGATCAAACACAAGTA---TTGTTTCATTATTCT---TCTTCTCAAAC 403 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| || || | ||||||||| ||||||||||||||||||| || | | |||||| Sbjct 402 CCATAGGCCAATGAAGCAGCAGTGGGTTCATTAATAATTCTCAGGACTTCCAAGCCAGCA 343 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || | |||||||| || |||||| ||| || ||||| || ||||||||||||||||| Sbjct 342 ATCCGGCCTGCATCCTTTGTGGCTGTTCTCTGAGAATCATTGAAATATGCAGGAACAGTT 283 Query 518297 ATAACGGC 518304 || || || Sbjct 282 ATCACAGC 275 >seq1324 Length=7794 Score = 123 bits (136), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||| |||||| ||||||||||||||||| ||||| || | ||| Sbjct 6377 TTTTTGTCCATACCGAACGCAAGTGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAACG 6318 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | | |||||| ||| | || ||||||||||| ||||| | ||| | ||||||||| || Sbjct 6317 TCTAAACCAGCGATTTTACCCGCATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAA 6258 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 |||||||| |||||||| || || || ||| || ||| | ||| | ||| |||| Sbjct 6257 GCAGGAACTGTAATAACTGCTTCTGTAACTGTTTCACCTAAATAGTCTTCTGCAGTTTTC 6198 Query 518345 TTCATTTT 518352 ||||| || Sbjct 6197 TTCATCTT 6190 Score = 89.7 bits (98), Expect = 4e-12 Identities = 101/134 (75%), Gaps = 6/134 (4%) Strand=Plus/Minus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTAT---TTTAAGAACATCTAAACC 322299 |||| | ||||| || || ||||||||||| ||||| || ||||| | |||||||| Sbjct 6366 ACCGAACGCAAGTGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAA---CGTCTAAACC 6310 Query 322300 CGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTAC 322359 || |||||| | | ||| ||||||||| | || || || ||||| || || || || Sbjct 6309 AGCGATTTTACCCGCATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAAGCAGGAAC 6250 Query 322360 AGTAATAACTGCTT 322373 ||||||||||||| Sbjct 6249 TGTAATAACTGCTT 6236 >seq6757 Length=2099 Score = 111 bits (122), Expect = 1e-18 Identities = 321/491 (65%), Gaps = 15/491 (3%) Strand=Plus/Plus Query 517847 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906 ||| | ||||| || |||||||| ||||| | ||||| || ||||| || ||||| Sbjct 499 TTAAAGTCAATACCATCGAACAACGAATCGATCTCAATGTAAGCTTGAGCGGACGAAGAC 558 Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTTTTGCTGA 517962 || | |||||| || || ||||| || |||| ||| | || | | ||| | || Sbjct 559 AGCGTACGTTTCGCGCGCTCACAAGCAGTCCGTAGACGACGGAGAGCACGCTGGTTCTCC 618 Query 517963 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGA 518020 |||| || | | || | |||||| || | || | || | || ||| Sbjct 619 GTGATG----TCCTTGCGGTGCTTGCGCTTGAACTCCTGGACGAAG--TGGTCCACCAGA 672 Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 || || || ||||||||||| ||||| | || | || | || || | || | || Sbjct 673 CGGTTGTCGAAATCTTCACCGCCCAAGTGCGTGTCACCAGCAGTGGCCTTCACCTCAAAG 732 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | || ||||| | || || | |||||| ||| |||||||| | ||||| || Sbjct 733 ATGCCTTCTTCGATGCTCAGTAGCGATACATCGAAGGTACCACCACCAAGGTCAAAGATC 792 Query 518141 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 518200 || || || || | | || || || | ||| || |||| ||||||||| || Sbjct 793 AGCACGTTGCGCTC---GCCGCCCTTCTTGTCCAAACCGTAAGCAATAGCAGCAGCCGTC 849 Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || || || || || | || ||||| || ||||| || ||||| || || |||||| Sbjct 850 GGCTCGTTGATGATACGCAGCACATTCAGCCCAGCGATAGCACCTGCGTCCTTTGTGGCT 909 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 || | || || ||||| || || || || || || || ||||||| | |||||||| Sbjct 910 TGACGCTGCGAGTCGTTGAAGTACGCTGGTACCGTGATCACGGCATTCTTCACTTCTTTG 969 Query 518321 CCAATATAAGC 518331 || ||| |||| Sbjct 970 CCGATAAAAGC 980 >seq8376 Length=1716 Score = 104 bits (114), Expect = 2e-16 Identities = 197/289 (68%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||| || |||||||| | | ||| | || | || || | || | ||| | Sbjct 923 TTGTCAAAGTCCTCACCTCCAAGGTGAGTGTCCCCAGCGGTTGCCTTCACCTCGAAGATA 982 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || || | | || |||| |||||| ||| |||||||| | ||||| || | Sbjct 983 CCTTCCTCGATGGTCAGCAGAGACACATCAAAGGTACCACCACCAAGGTCAAAGATCAAC 1042 Query 518144 ACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 |||||| | || | | ||| || || ||||||||||| |||| || ||||| Sbjct 1043 ACATTCTTCTCACCGACGCTGGTGGCCTTCTTGTCAAGACCATAGGCAATGGCCGCAGCG 1102 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || |||||||| || || | || || || |||||||| || || ||||| || ||| Sbjct 1103 GTGGGTTCATTGATGATGCGCATCACGTTCAGACCAGCGATGACCCCGGCATCCTTGGTG 1162 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 || || || || || || || || || |||||||| || | ||| |||| Sbjct 1163 GCCTGCCTCTGGGAGTCATTGAAGTAAGCAGGAACCGTGACAACAGCAT 1211 >seq5137 Length=2679 Score = 89.7 bits (98), Expect = 4e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1078742 TTATCTTCACAGTTTCGATCCTCCGATTATTCATCGTGACATTAAGCCATCAAATATTCT 1078801 ||||||||||||||||| ||||| || | ||||||||||| |||||||| | | |||| Sbjct 2557 TTATCTTCACAGTTTCGTGCCTCCATTTGTCCATCGTGACATCAAGCCATCGAGTTTTCT 2616 Query 1078802 CATCGATGAAAATTGGAATGTCAAAATTGCCGATTTTGG 1078840 | | |||| ||| || |||||| || | |||| ||||| Sbjct 2617 CGTGGATGCAAAGTGCAATGTCCAATTGTCCGACTTTGG 2655 >seq250 Length=21463 Score = 86.0 bits (94), Expect = 5e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 || ||||||||||| ||| | || || ||||||| || ||||||||| | || || ||| Sbjct 9986 GGCAAAGAAGGTCGCATTCGTGGCAACCTGATGGGCAAGCGTGTCGATTTTTCGGCGCGT 9927 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTC 668966 || || ||||| |||| || || ||||| || || |||| ||||| |||| Sbjct 9926 ACGGTCATTACCGCTGACCCTAACATTGCCATCGATCAAGTCGGTGTGCCTC 9875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779058837754534