Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq1131 551 1e-152 seq8333 347 3e-91 seq8149 154 4e-33 seq1720 107 5e-19 seq11451 91.5 4e-14 >seq1131 Length=8710 Score = 551 bits (610), Expect = 1e-152 Identities = 1781/2692 (66%), Gaps = 136/2692 (5%) Strand=Plus/Minus Query 28561 TGGAAAGACGCGACGCCGATCGAGCGCATCGAGGCGGCGGC--CGAAACGCGCCTGATGG 28618 ||| | ||||||| |||| | || || | | ||||| | ||| | |||| || || Sbjct 5441 TGGGAGGACGCGAAGCCGCTGGACCGGGTGAA--CGGCGCCATCGAGATGCGCATGGTGC 5384 Query 28619 TCCTGATTGCGAAGGACAAGAAGGACGGCGCGGACTACAAGGAAATCGACCTGCTCGGCC 28678 ||| | ||||||| ||||| |||| |||| |||||| ||||||||||| |||| Sbjct 5383 AGCTGGTGCTGAAGGACCAGAAGACGGGCGGCGACTTCAAGGAGATCGACCTGCTGGGCC 5324 Query 28679 GACAGATCGAGCGGCTCGCGCGCGTGCAGAAATACGGGGAGACGGGGAAGGAAGGCGACC 28738 | ||| | ||||| ||||||||| || ||| | ||||| |||||||||||| Sbjct 5323 GGCAGCTGGAGCGCACGGCGCGCGTGGAGCGCTACCAGAGCACGGGCAAGGAAGGCGACT 5264 Query 28739 TGAACCCGAACATTGCCGCGCGCAATGCCGGGCCGAAGCGCAAGCCGCCGAAAAACGAAA 28798 ||||||| ||||||||||||||||| || | ||| ||||||| |||| | ||| | Sbjct 5263 TGAACCCCAACATTGCCGCGCGCAACGCGGCGCCCAAGCGCACGCCGAAGCGCAACCACT 5204 Query 28799 TCAGCGAGGAACAGGAAGAGCGGATCGTGAAGGCGTTCCGCGA--ATCACTGTTCGACTA 28856 ||| ||| || ||| ||| | | || || |||| ||| | ||| | | | Sbjct 5203 TCACCGAAGAGCAGATCGAGAAGCTGCTGGAGATCTTCCACGAGCAGAACTTTGGGTATG 5144 Query 28857 CCA-GAAGGTCTGGTAT-CGAA-ACGGCGATCAGCAGACGCGCAATATCCTGAAGTCACG 28913 || |||| ||| | || | |||| ||| ||||| | |||||||| || Sbjct 5143 CCGCGAAGTGGTGGGAGGCGCAGACGG-----AGCGCACGCGGCTGCTGCTGAAGTCGCG 5089 Query 28914 GCAGATCGGCGCCACCTGGTATTTCGCACGCGAGGCATTCGTCGACGCGC--TCGATACC 28971 ||||||||| ||||| ||||| || || |||||||| | | |||||| || Sbjct 5088 GCAGATCGGGGCCACTTGGTACTTTGCCCGCGAGGCGCTGAT--ACGCGCCATCACGGAG 5031 Query 28972 GGCCGCAACCAGATTTTTCTATCGGCCAGCAAAG-CACAGGCGCACGTCTTCAAACAGTA 29030 || ||||| |||||||| || || || | ||||| | ||||||||| ||||| ||| Sbjct 5030 GGGCGCAATCAGATTTTCCTTTCTGC-ATCAAAGGCGCAGGCGCACCAGTTCAAGACGTA 4972 Query 29031 CATCGTGCAGTTCGCTCGTGACGTGGCCGACGTTGAGCTGACGGGCGATCCGATCATTCT 29090 ||| || || || || | ||| | ||| ||||||| ||||| || ||| | || Sbjct 4971 CATGCTGGCCTTTGC-CGGGC--TGGTGGGCGTGGAGCTGAGCGGCGACCCTATCGTGCT 4915 Query 29091 GCCGAACGGTGCGACGCTGTACTTCCTAGGGACGAACTCGCGCACCGCGCAGTCGTATCA 29150 | ||||||||||| |||| |||| | || || || || || |||||| | Sbjct 4914 GTCGAACGGTGCGGAGCTGCACTTTTTGGGCACCAATGCGAAGACGGCGCAGGGGCGCAG 4855 Query 29151 CGGCAATCTGTACTTCGACGAATATTTCTGGGTGCCGAAGTTCCGCGAGCTGAATACCGT 29210 |||| | | |||||||| || | || |||||| || || ||| |||| || | || Sbjct 4854 CGGCGACTTCTACTTCGATGAGTTCTTTTGGGTGTCGGGCTTTCGCCAGCTCAACAAGGT 4795 Query 29211 TGCGTCGGGCATGGCGATGCACAAACGCTGGCGGCTGACCTACTTCAGCACGCCGTCGAG 29270 || ||| |||||||| |||||| | ||||| ||| |||||| ||| |||||| Sbjct 4794 GGCCGCGGCCATGGCGACGCACAAGCATTGGCGCAAGACGTACTTCTCCACCCCGTCGGC 4735 Query 29271 TACGACCCATGAAGCCTACGCGTTCTGGAGCGGCGCCGATGCGAATCGTGGGCGCGCGCC 29330 | | | ||||| || || ||||||||| |||| | || ||| | | ||| ||| | Sbjct 4734 CATGTCGCATGAGGCGTATCCGTTCTGGAACGGCACGGA-GCGCAACAAAGGC-CGCAGC 4677 Query 29331 TAG--CGATCGTATCCAGATCGACACGAGCCACGAAGCGCTCGTGCGA-GGCATGCTGGG 29387 || ||| ||| |||||| |||||||| |||||| | ||| ||||| | | Sbjct 4676 AAGGGCGAGGCCATCACCATCGACGTGAGCCACGCAGCGCT-GCGCGGCGGCATCC---G 4621 Query 29388 CGAGGACGAGC---AGTGGCGTCAGATCGTCACCGTACTCGATGCGAT-CGAGGGCGGCT 29443 || || ||| | ||||||| | | || || | || ||| || | |||| Sbjct 4620 CGGGGCCGATCGCAAGTGGCGCGACGTGGTGACGATCGAGGACGCGGCACGCCTG-GGCT 4562 Query 29444 GCGACTTGTTCGACCTGGA-GAGACTTCGGCGCCGGTA-CAGTGCAGAGGCTTTCGCGAA 29501 || || |||||||| | || ||| || ||| | | | ||| | || | ||||| || Sbjct 4561 GCAACCTGTTCGACATCGACGAG-CTGCGG-GAAGAAAGCAGCCCGGAAGAGTTCGCCAA 4504 Query 29502 CCTGCTGATGTGCCAGTTCATCGACGATT-CGGTGTCGGTGTTCAAGCTGGCCGAGCTGC 29560 |||| |||||| ||||||||||||| || | | |||||| ||| || ||| Sbjct 4503 CCTGTACATGTGCGAGTTCATCGACGACAGCGCTAGCC-TGTTCACGCTCAAGGAAATGC 4445 Query 29561 AGCGCTGCATGGTCGACTCGTGGGAGGAATGGGCCGACGACTTCTCGCNNNNNNNNNNNC 29620 || |||||||||| ||| ||||||| ||||| || | | || | Sbjct 4444 AGGGCTGCATGGTGGACAGCTGGGAGGCGTGGGCGGAT---TGCAAGCCGTTTGCCACGC 4388 Query 29621 GTCCGTTCG-GCTATCGCGAGGTGTGGGTTGGCTACGATCCGGCGCTGACTGGCGACTCA 29679 | |||| || || | | ||||||||| || ||||| || ||| || ||||| | Sbjct 4387 GGCCGTACGCGCACTTTCC-GGTGTGGGTGGGGTACGACCCATCGCACACCGGCGATGCT 4329 Query 29680 GCCGGTCTCGTTGTCGTGGCGCCGCCGCGTGTCGAGGGTGGGACGTTCCGCGTGCTCGAA 29739 || | || || || | || |||||||| | ||| || | |||||| |||| | Sbjct 4328 GCGGCGCTGGTGGTGATTGCACCGCCGCGGGCGCCGGGCGGCAAGTTCCGGCTGCTGCAC 4269 Query 29740 CGTCACCAGTTCCGCGGCAACGACTTCGAGGAACAGGCCGCGGCGATCGAACAGATCACG 29799 || || |||||| || ||||||||| | ||||| | ||| ||| ||||||| Sbjct 4268 CGGCAGCAGTTCAAGGGGGCGGACTTCGAGCAGCAGGCAGAGGCCATCCGCGCGATCACG 4209 Query 29800 CAGCGCTACAACGTCGGCTATATCGCGATCGACACGA-CGGGCATGGGGCAGGGCGTCTA 29858 ||| | |||||| ||| |||| |||||||| | ||||| |||||||||||||||| Sbjct 4208 CAGAAGTTCAACGTGACCTACATCGGCATCGACACCAGCGGGC-TGGGGCAGGGCGTCTA 4150 Query 29859 TCAGCTCGTGCGGAAGTTCTACCCGGCGGCCGTTGCATTGAACTACTCGCCCGAGGTCAA 29918 |||| ||| ||||||| ||| ||| || | | ||| ||||| || Sbjct 4149 TCAGAACGTCATCAAGTTCTTTCCGCAGGCGCGGGCCTACCAGTACAGCGTGGAGGTGAA 4090 Query 29919 AACTCGCCTTGTGCTGAAGGGGCAATCCG-TCATCCGCAACGGCCGCCTGCAATTCGAC- 29976 | ||||| |||||||||| ||| | | | ||| |||| |||||| | | | ||| Sbjct 4089 GAGCCGCCTGGTGCTGAAGGC-CAAGCAGGTGATCGGCAAGGGCCGCTTTGAGATGGACA 4031 Query 29977 GCGGGATGGACCGACCTGGCCGCGGCGTTCATGGGAATCAAACAGACCATGACGGCGAGC 30036 ||||| || || || |||| |||||||| |||| ||| || ||||||| | Sbjct 4030 GCGGG-TGCACGGATGTGGCAGCGGCGTTTATGGCCATCCGCAAGGTGCTGACGGCATCC 3972 Query 30037 GGCCGCCACGCAACGTACACCGCCGACCGCAACGAAGAGACGGGCCACGCCGACCTGGCA 30096 || || || |||||||| | ||||| ||| ||| | |||||||| || ||||| Sbjct 3971 CAGCGGCAGATCACCTACACCGCGGGCCGCAGCGATGAGGCCGGCCACGCGGATCTGGCC 3912 Query 30097 TGGGCCTGCCTGCACGCGATCGACCGCGAACCGCTCGCCGGCGG------CGACATCAAT 30150 ||||| ||| |||| || ||||| |||| | | ||||||| || | |||| Sbjct 3911 TGGGCGTGCATGCATGCCTTCGACAACGAATCTTTGGCCGGCGATGTGGCCGGCGGCAAT 3852 Query 30151 TCTTCATCTTTCACGGAGTTCTATTCATGAGCAAgcgccgatcgcgcgcgccgcgcacgt 30210 ||||| | |||| | | || ||| ||| |||| | || | || ||| Sbjct 3851 TCTTCG------ATGGAGATTTTTTGATGCGCATGCGC--AAGGCAGCAACAGCCCAC-- 3802 Query 30211 tcgcggccgcgccgg--attcgggcgccgccg----gcaccgcgc--cggcgcgcgccg- 30261 | | ||| | || | | | ||| ||||| ||||||| | ||||| ||| | Sbjct 3801 -CCCCGCCACACCCGTCAGCCAGGCACCGCCCTGGCGCACCGCCCGGCGGCGGGCGAGGT 3743 Query 30262 --AGGTCTTCACCTTCGACGATCCCACGCCGGTCATGAACCGC-GCCGAGATTCTCGACT 30318 ||| |||||||| | ||| || || ||| ||||| ||| | ||||| | Sbjct 3742 GCAGGCGTTCACCTTTGGCGAGCCGGAGCTGGTGCCCCACCGCAGCC----TGCTCGATT 3687 Query 30319 ACGTCGAATGCTGGTCGAACGGCGATTGGTTCGAGCCGCCCGT-CAGCTTCGCCGGCCTG 30377 |||| ||| | || ||| | |||| ||||||||| | ||||| | ||||||| Sbjct 3686 ACGTGGAAACGGCCTTCAATGGCAAGTGGTACGAGCCGCCGCTGCAGCTG-GACGGCCTG 3628 Query 30378 GCGAAATCGTTCCGCGC-TAGCACGCACCACAGCTCCGCGCTGTACTTCAAGGCGAACGT 30436 || || | ||||| | || |||||||| || ||| | | || ||| ||| | Sbjct 3627 GCCCGCGCGCTGCGCGCATCGC-CGCACCACGGCAGCGCCATCTTTTTGAAGCGCAACCT 3569 Query 30437 GCTGGCGTCGACGTTCCGGCCTCACAGGTGGCTATCCCGGCATGCG---TTC-GAGCGAT 30492 |||||| | | ||| || |||| | ||| || ||| ||| ||| | ||| | Sbjct 3568 ACTGGCGGCCAGCTTCATCCCGCACAAGCTGCTGTC---GCACGCGACGTTCTGCGCGCT 3512 Query 30493 GGGCGCTCGACTTCCTGACGTTCGGCAACGGCTACCTGGAACGCCGCCGCAATCAGCTCG 30552 || || | ||||| || ||| | ||||| |||||| |||| || ||| | ||| Sbjct 3511 GG-CGTTGGACTTTCTCACGCTGGGCAATGGCTACTTGGAGCGGGAGCGCTCCCCCTTCG 3453 Query 30553 GCGACACG---CTGCGGCTCGAACCGGCCCTGGCCAAATACACGCGGCGCAAGGCCGATT 30609 || ||| ||| | || | | |||| | |||||||||||| || || Sbjct 3452 GC---ACGGATCTGGGCCTGCGCCATTCGCTGGGCCTGTACACGCGGCGC--GG--GAAG 3400 Query 30610 TCAGTG-GCTTTGTGTACGTGAACGGC--TGGCAGGACAAGCACGAGTTCGAGCCGGGCA 30666 ||| | ||| | | | |||| |||| ||| || | |||||||||| ||||| | Sbjct 3399 GCAGGGCGCTATTTCTTCGTG--CGGCACTGGGGCGAGGAACACGAGTTCGCGCCGGACT 3342 Query 30667 GCGTGTTCCAGCTCATGCGACCGGAC-ATCAA--CCAGGAGGTGTACGGCCTGCCCGAAT 30723 || | ||| | |||| |||| ||| |||||||||||| ||| |||| || | Sbjct 3341 CTGTCTGGCAGGTGC-GCGA--GGACGATCTGGCCCAGGAGGTGTATGGCGTGCCGGAGT 3285 Query 30724 ATCTCAGCTCGCTTCACTCGGCCTGGCTGAACGAGTCGTCGACGCTGTTCCGGCGGAAGT 30783 | || ||| || | || |||||| ||||||||| | | || |||| || || || Sbjct 3284 ACCTGAGCGCGTTGCAGTCGGCCCACCTGAACGAGGCCGCCACCATGTTTCGCCGCCGGT 3225 Query 30784 ATTACGAAAACGGTAGCCACGCCGGCTTCATCCTCTACATGACCGACGCGGCGCAGAAGC 30843 | ||||| ||||| ||||| |||||||||||| | ||| ||| |||||| || | ||| Sbjct 3224 ACTACGAGAACGGCAGCCATGCCGGCTTCATCATGTACCTGAGCGACGCCACGGTG-AGC 3166 Query 30844 AGGA-GGATGTCGACAACATGCGCACGGCGTTGAAGAACGCGAAGGGGCCGGGCAATTTC 30902 | | || || |||| ||||| | | || || | |||||||||||||| ||| Sbjct 3165 ACCACCGACGTGGACACGCTGCGCGAGCAGCTGCGCAAGTCCAAGGGGCCGGGCAACTTC 3106 Query 30903 CGCAACGTGTTCATGTACGCGCCGGGCGGGAAAAAGGACGGTATCCAGCTCATCCCAGTG 30962 |||||| ||||| || ||||||| ||||| || |||||| | |||| ||||| | Sbjct 3105 CGCAACCTGTTCCTGCACGCGCCTGGCGGCAAGGCGGACGGCTTGAAGCTGATCCCCATC 3046 Query 30963 TCCGAGGTCGCGGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGC---GACGAC 31019 |||| |||| || || ||||| ||| | |||||||||| || || | |||| Sbjct 3045 AGCGAGATCGCCGCCAAAGACGACTTCGCCGCCATCAAGAAC---ACCAGCATGGCCGAC 2989 Query 31020 CTGCTCGCCGCGCATCGCGTGCCGCCGCAACTGCTCGGTATCGTGCCGAGCAATTCGGGC 31079 |||| ||||| || ||||||||||| ||||| || ||| | || | ||| |||| Sbjct 2988 GTGCTGGCCGCCCACCGCGTGCCGCCCGGCCTGCTGGGCATCATCCCCAACAACACGGGA 2929 Query 31080 GGGTTCGGC-ACGCCGGACACCGCGGC---GCGCGTGTTCGGTCGCAACGAAATCAAGCC 31135 || |||||| ||||||| || ||| || || ||| |||||| ||| ||| Sbjct 2928 GGCTTCGGCAACGCCGG----CGAGGCTCTGCAGGTCTTCATGGCCAACGAGATCGCGCC 2873 Query 31136 GCTGCAGGCCCGCTTCGCCGAGCTGAACGACTGGCTCGGCGAAGAGGTCGTG 31187 | | ||||| ||| | | ||| || || ||| | || | ||||| ||| Sbjct 2872 GATTCAGGCGCGCATGCGTGGGCTCAATGAGTGGATGGGGGTGGAGGTGGTG 2821 Score = 271 bits (300), Expect = 2e-68 Identities = 609/900 (68%), Gaps = 51/900 (6%) Strand=Plus/Minus Query 26441 GCCGCAACCGAAGTCTTCGACGACATACGCGTCGTTCGACGATTCGTAGTTCTCGATTTG 26500 ||||| ||| |||||||||| || || ||||||| ||||| ||| |||||| | Sbjct 7749 GCCGCGGCCGTAGTCTTCGACCACGTAGTCGTCGTTGGACGACTCGAAGTTCTGCACCGC 7690 Query 26501 GTCGCGCTTCGGGTTGTCGATCAGCGAGCGACGGCGCGCACCTTCCTGGAAGTAGATCGA 26560 ||| || || ||| ||| ||| |||||||| | ||| ||||||| || Sbjct 7689 ATCGACCTCGGGCGCGTCCTTCACGTGGCGGCGGCGCGCGGCGATCTGCCAGTAGATGGA 7630 Query 26561 CAGGTTCTCCAGCTTCGTCACCATCATCGCGCGCTTCGGG-AAGAACGGCACACGCACGG 26619 |||||| |||| | || || | || | || ||||||| ||||| ||||| |||| Sbjct 7629 CAGGTTGGACAGCGTGGTGACGAGCACCTTGC-CTTCGGGGAAGAAGGGCACGGTGACGG 7571 Query 26620 CCGGCAGGTTGCCGATGCGCTTCTGGCTGACGATCAGGTCGGCCGCGAGCTGCTCGGTCG 26679 | ||||| ||| | |||||| || || || ||| |||| |||||| ||||| | Sbjct 7570 CGCGCAGGCCGCCTACGCGCTTTTGCGAGATGACCAGATCGGTGGCGAGCGTTTCGGTGG 7511 Query 26680 GTGCCTGCGTCGTG-TTGACGATCGGGAAATACTTGTCGTGCAGCAGCTCGCGGCCGCAG 26738 | |||| || || ||||| | |||||| ||||||| |||| ||| |||||||| | Sbjct 7510 CGGGCTGC-TCTTGGTTGACCAGCGGGAAGAACTTGTCATGCATGAGCCCGCGGCCGAGG 7452 Query 26739 ATCACAACGAGCCCCGTGTCTTCCTGGAACCACGGGTCGATCATCGACGACACGATGTCC 26798 || | ||||| | | ||| | ||| |||||||||||| || | || | | |||| Sbjct 7451 ATGGCGACGAGGTCGGGGTCGCCGTGGTACCACGGGTCGAGCA--GCTGA-ATGCTGTCG 7395 Query 26799 ATCACGAGCGCGTCGAGGTTCACGTAGTCGCCGCCCTTACCGACGAGCACCTTGCCGGCT 26858 ||||||||||||||||||| ||| ||| ||| || | ||||||| Sbjct 7394 TACACGAGCGCGTCGAGGTTCTTGTACTCGGCGCTGGCGTCGCTGCCCACCTTG------ 7341 Query 26859 TCCTTCGCACCTTC---GTGCAGCACGCGATGCCCGGCGCGGTCGCGATACTGTTGCAGC 26915 ||| || | || | || ||||| |||| |||||| |||| |||||| Sbjct 7340 ATCTTGGCGGCGTCGGAGCCCATGACGCGGGCGGCGGCCTTGTCGCGGTACTTCTGCAGC 7281 Query 26916 CAACCGATGTTCACGTCCTGCAACAGCGGGTTCGCTGC----TT--TGTCCG--TCGACA 26967 || || |||||||||| |||| ||| |||| || || || |||| | |||| Sbjct 7280 CAGCCCTTGTTCACGTCTTGCAGCAGGGGGTGGGCGGCGAGGTTGGTGTCGGGCTCGATG 7221 Query 26968 GTGCCGCCTTTACGCCGTTCCAGCCGATCATGATCCGGTCGAGCGCAGACTGG---TTGA 27024 | | |||||||| ||||||| | || ||||||||||| |||| |||| Sbjct 7220 GAG--------ACGCCGTTGAAGCCGATGGTCATGCGGTCGAGCGC---CTGGCGCTTGA 7172 Query 27025 GGATCACATTGCGGATGCGTTGCTGGAAGTCGGGGAATTTCGCCCAGGCGTCGAGCTTGC 27084 |||| | | ||||||||| ||||||||||||| | |||||||||||||||| || Sbjct 7171 TGATCGCGTCGCGGATGCGCGTCTGGAAGTCGGGGCGGTGCGCCCAGGCGTCGAGCAGGC 7112 Query 27085 GGTACGTAATGGCCGTGTCGTAGTCGGTTTTCTCGCAGCGGTAG----CGGTTGCTGTCC 27140 |||| || | ||||||| ||| ||| | | ||||| |||| ||||| | ||| Sbjct 7111 GGTAGGTGAACTGCGTGTCGAAGTTGGTCTGCACGCAGGCGTAGCCGTCGGTTTCGGTCG 7052 Query 27141 A-GCGCCGTCGGGTCGATCGGCTGGCGTTC--GGCCTTCGTC-GTGTCGGTGCGGCTCGC 27196 | || ||| | | ||||| ||| | ||| || | |||| ||||||||| || Sbjct 7051 ATTCGACGTTGCG-----CGGCTTGCGGACCTTGCCGGCGGCTGTGTTGGTGCGGCTGGC 6997 Query 27197 GATCGGACCGGATACCGACAGGCCGAGCTTTTCGCCTTCCAGCTCGGTCACGGGCAGGAT 27256 || || |||| || || ||| | ||| ||||| || | || |||| | ||| Sbjct 6996 AATGGGGCCGGTGACGCCCACGCCCACCTTGTCGCCGGCCTGGTCATCCACGCCGATGAT 6937 Query 27257 GTTGATGCTCTTCAGGAATGCGCTCGATTCCTGCATTTTGGTTTCGAGCGTTTGCTGGAC 27316 ||||||| |||||| ||| |||||||||||| | |||||||| ||||||| || Sbjct 6936 GTTGATGGAGGCCAGGAACGCGGACGATTCCTGCATGCGGCTTTCGAGCTTTTGCTGCAC 6877 Score = 131 bits (144), Expect = 4e-26 Identities = 208/294 (71%), Gaps = 6/294 (2%) Strand=Plus/Minus Query 26018 CGACGACGGAGGCGAGCGAC-CGTTCGAACTGGTCGGGTAGCGCGAGGCCGTGCGTGAGC 26076 ||| ||||| |||| ||| | || | | | |||||||| | | | ||||||| ||| Sbjct 8229 CGATGACGGCGGCG-GCGCCGCGCTGGTAGTGGTCGGGCATGGGCATGCCGTGCTGCAGC 8171 Query 26077 GCGTACGCGGCGATCGCGAGCGCACCGTCGTAGTCGCCGGCGTCGATGCGCCAGACCATG 26136 |||| | |||||| | |||||| | ||||| |||||||||||||| ||| |||||| Sbjct 8170 ACGTAGGGGGCGATGGTGAGCGCCAGGGCGTAGGCGCCGGCGTCGATGGCCCACACCATG 8111 Query 26137 ATCGTCACGAGTACGTCGTCCTGGGCGCCGCGGCCGCCGTTCAACACGCCCGCCACGTAG 26196 || ||| || |||| | |||||||| ||||||| | | | |||| | | || Sbjct 8110 CAGGTGGTGAGCACCGCGTCTTCGGCGCCGCCGCCGCCGGTGAGCGCGCCGCCGATCCAG 8051 Query 26197 TCGGCGTACTCCGGCAGCAACTTCCGCTT--CAGTTCGACCTTGCGGGCGACCGACTGCA 26254 ||| |||| | ||||||| ||| ||| || || |||| | ||| ||||| | Sbjct 8050 TCGAGGTACGCGGGCAGCAGCTTGGCCTTGGTGGTGCG--CTTGAGCTGGACGGACTGGA 7993 Query 26255 CGCCCTTCAGGGCGCGGCGGTCGGCCGCGAGCTTCGCGAGCATCAGCTCGTAGG 26308 | |||||| |||||| |||||| ||||||||| | ||||| |||| || || Sbjct 7992 TGGCCTTCAAGGCGCGCTTGTCGGCGGCGAGCTTCACCAGCATGAGCTGGTGGG 7939 >seq8333 Length=1724 Score = 347 bits (384), Expect = 3e-91 Identities = 726/1069 (68%), Gaps = 32/1069 (3%) Strand=Plus/Plus Query 14121 GGCGAAATCGGCGAGATAGCGATCGGTGATGCGCTGGCGCAGCTTCAGGTTTTCGAGCGG 14180 ||| || ||||| || ||| ||||||||| ||| | | |||||| || ||||| Sbjct 623 GGCAAACTCGGCCAGGTAGGTGTCGGTGATGGATTGGTTGAACACCAGGTTCTCCAGCGG 682 Query 14181 CGGGACCGGCGTGTAGTCGTAGTCGATCCATGTAC-CGCCCGACGTC-AGCTCGTCGGTC 14238 ||| |||||||||||||||||| |||| || | || |||||| | || || || | Sbjct 683 CGGCACCGGCGTGTAGTCGTAGCTGATC--TGCAGGCGGCCGACGGCCAGGTCTTCCTTG 740 Query 14239 GTGTTCGGCTCCGGGTCGTACCAGGCGCCGCCACCGATCAGCTCGCCGACCGAGACTTCG 14298 |||| | || |||||| | | || | | ||||| || | |||| | ||| Sbjct 741 CCGTTCAGATCGGGGTCGAAGTACGCATTGGCCCCGATGAGATAGCCGCCATTGACCAGA 800 Query 14299 CGGCGGAACCACGCGTTGATGTTCTCGATGATGTcgcgcgcgcgcgACGGGTTGAGCGGG 14358 |||||| | |||||||| | | ||||||||| | |||| |||| | || Sbjct 801 TCGCGGAAGCGGCTGTTGATGTAGCCCAGCATGTCGCGCACCAGCGAGGGGTGCATGGGC 860 Query 14359 CCGTCGACGACGCCCATCTGTTCCTCGGCGATCGTGTCAGCGATCACCTGTGCCGAACGC 14418 ||||| || | | | || | || ||||| ||||| || | |||||| || | || Sbjct 861 TTGTCGATGAAGACGAAGTGCGCTTCTGCGATGGTGTCGGCCAGCACCTGGGCGGTGCGG 920 Query 14419 GTGTAGTTCTCGAAGAAGAACTTGCCGTCCGCG---TCGCACGTGCGCGAGCCCCAGAAA 14475 |||||| ||| ||| |||||| ||| | ||| ||||| |||||||| |||||||| Sbjct 921 GTGTAGGGCTCAAAGGCGAACTTTCCGCCGGCGGCCTCGCAGGTGCGCGAACCCCAGAAG 980 Query 14476 CGGAAGCCGTTTCGGTTGACGAGCGTGGTGACCTGGTTCTCGTTCAGATAGCCGGCGTCC 14535 ||| | |||| || | ||||||||||| | || |||||| ||||| || || Sbjct 981 CGGTATCCGTCGCGCCGAATCAGCGTGGTGACTTCCTTGCTGTTCAGGTAGCCCGCATCG 1040 Query 14536 GTTGCCGGGTCTTGCAAATCCCACGACACGTC-CGCGCTGATGCCGGTCACGCCGTTGAC 14594 | |||||| |||| || | |||| || |||| ||||||| |||||||||||| Sbjct 1041 CTGGCCGGGCTCTGCAGGTCGAAGAACACATCGCGCG-TGATGCCTTCCACGCCGTTGAC 1099 Query 14595 GACGACGTTCGACAGCGTCTTGTGCCAGCCGATGTCGTTGTCGATCTTCGCGCGCAGGCC 14654 || | ||| || | | |||||||||||| || || | || | ||| ||||||||||| Sbjct 1100 CACCATGTTGGAAATGGACTTGTGCCAGCCAATCTCCTGATCCAGCTTGGCGCGCAGGCC 1159 Query 14655 CGCCGCGATCGCCGGCGCCGGG-ATGGCGACGGTCGAGTTCGTTATGTCGTCCCAGCCGA 14713 | || || | || || |||| | | |||| | | || | |||||||| | | Sbjct 1160 CAGGGC-ATAGGCGACGGCGGGCACCTCCACGGCCTCGCCCGCCTCGCCGTCCCAGGCCA 1218 Query 14714 GCCAATCCGGCCAGATCACCATGATTTCGCGCTGGCCGAACTGCTTGCGGTACGCGACCG 14773 | | | ||||| |||||||| | |||||||| ||||||| |||||| || | Sbjct 1219 GGAAGTTGGGCCACATCACCATCACCTCGCGCTGCCCGAACTCGCCGCGGTAGAGCACGG 1278 Query 14774 CCTCTTCCTTCGT---------------CTTGCAGCCGTGCGCGGCGACGTACACCATCG 14818 | ||||||| || ||| |||| | || | ||||| | | Sbjct 1279 CGGCTTCCTTGGTGGCGGCATAGGCATCGTTGGCGCCGCGGGCCGAAACGTAGGTGAAGG 1338 Query 14819 CGCGCAGCGATTGCGCGATCGTCGCGAATGCTGCGGCGACGGGCTGCGTGTCGAGGCCGG 14878 |||| ||| ||||| | | ||| | || |||| |||| || ||||| ||||||| Sbjct 1339 CGCGGAGCTGCTGCGCCACGGACGCCATGGCCACGGCCACGGCCTTGGTGTCCAGGCCGG 1398 Query 14879 GCGCGACCAGGATGCGCGGCTTCACGGCGAGCTTCCCCTGCGCGGCCAGCAACGCCTTCA 14938 ||||| | | |||||||||||||||| | | | ||||| || ||||||| |||| || Sbjct 1399 GCGCGCCGATGATGCGCGGCTTCACGCCCAATTGCCCCTCGGCCGCCAGCAGGGCCTGCA 1458 Query 14939 TGCCGGTGTATTTGCCGTCCGGCGTGACGGTGCCGATGACGTTCGCGGTCGTCTCGGCTT 14998 ||||||| | |||| || ||| ||||||||||||||| | | || || || Sbjct 1459 GGCCGGTGCGCTGGCCGGCCTCGGTGGTGGTGCCGATGACGTTGGTTGCGGTTTCCGCGG 1518 Query 14999 CGTCCTTTCCTTCCGCGACGCGCACGACGACGGTGACGGGCTTCGTCTGCTTGCCGATCG 15058 || | ||||| || |||||||| || || |||| || | ||||||| ||| | Sbjct 1519 CGGTGGTGCCTTCGGCCACGCGCACCACCACCGTGATGGCGCGGGCTTGCTTGCTGATGG 1578 Query 15059 CGTCGAGCGTG-CGGCGCAGCGTGCCCTTCGTGCCGGCCTTGCCAA--GCGCCGCGATGA 15115 |||| |||| | ||||| |||||||| || |||||||||||| | |||||| | | Sbjct 1579 CGTCCAGCGCGCCGGCG-AGCGTGCCGCCCGCGCCGGCCTTGCCGATGGCGCCG-GCCG- 1635 Query 15116 CGTTCGTCAGCAGCACCGGCGTGTCGAGCGGGAACGTCGCCGGGTCGGC 15164 ||| |||||||||||||| || |||||||||| | | | |||||| Sbjct 1636 GGTTGGTCAGCAGCACCGGTACGTTCAGCGGGAACGCCTCGGCGTCGGC 1684 >seq8149 Length=1767 Score = 154 bits (170), Expect = 4e-33 Identities = 377/557 (68%), Gaps = 26/557 (5%) Strand=Plus/Plus Query 14112 CACGCGCGAGGCGAAATCGGCGAGATAGCGATCGGTGATGCGCTGGCGCAGCTTCAGGTT 14171 ||||||| |||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct 1077 CACGCGCAGGGCGAAGTCGGCGAAGTAGCGATCGGTGATGCGCTGGCGAAAACCCAGGTC 1136 Query 14172 TTCGAGCGGCGGGACCGGCGTGTAGTCGTAGTCGATC--CATGTACCGCCCGACGTCAGC 14229 || ||||| || || ||||||||||||||||| | | || | ||| | | | ||| Sbjct 1137 CTCCAGCGGAGGCACGGGCGTGTAGTCGTAGTCCAGCACCAGCTT--GCCGGCCTTGAGC 1194 Query 14230 TCGTCGGTCGTGTT--CGGCTCCGGGTCGTACCAGGCGCCGCCACCGATCAGCTCGCCGA 14287 | ||||| ||| | | | || ||||||||||| ||| | | | | ||| | Sbjct 1195 GTGGCGGTCTCGTTGACCGTTTCG--TCGTACCAGGCCTTGCCGTCCAGGATGTAGCCCA 1252 Query 14288 CCGAGACTTCGCG--GCGGAACCACGCGTTGATGTTCTCGATGATGTcgcgcgcgcgcgA 14345 | | |||| ||||||| | ||||||| || | |||||| | | | | Sbjct 1253 --GGGCCTTCAGTTCGCGGAACTTGGTGTTGATGCCTTCCAGGATGTC-CTTGACCAGGC 1309 Query 14346 CGGGTTGAGCGGGCC-GTCGACGACGCCCATCTGTTCCTCGGCGATCGTGTCAGCGATCA 14404 ||| || |||| ||| ||| | | | || ||||||| || ||||| || | || Sbjct 1310 TGGGGTGCATGGGCTTGTCCACGGCCCAGAAATGCGCCTCGGCCATGGTGTCGGCCAGCA 1369 Query 14405 CCTGTGCCGAACGCGTGTAGTTCTCGAAGAAGAAC---TTGCCGTCCGCGTCGCACGTGC 14461 |||| || | ||| | | ||||||| |||| | || ||||| | || |||| Sbjct 1370 CCTGCGCGGTGCGCACGCTGGACTCGAAGCGGAACAGCTCGCTGTCCGTG---CAGGTGC 1426 Query 14462 GCGAGCCCCAGAAACGGAAGCCGTTTCGGTTGACGAGCGTGGTGACCTGGTTCTCGTTCA 14521 ||||||||||||| ||| ||| | | | || |||||||||| | || ||| | Sbjct 1427 GCGAGCCCCAGAAGCGGTGGCCCTGGCTCTGGATCAGCGTGGTGATGCCGGCCTGGTTGA 1486 Query 14522 GATAGCCGGCGTCCGTTGCCGGGTCTTGCAAATCCCACGACACGTCCGCGCT-GATGCCG 14580 | |||||| || || | ||| ||||| ||||| ||| || |||| |||||| Sbjct 1487 GGATGCCGGCCTCGGTATCGGGGCTTTGCAGGTCCCAATGCACATC-GCGCGAGATGCCC 1545 Query 14581 GTCACGCCGTTGACGACG--ACGTTCGACAGCGTCTTGTGCCAGCCGATGTCGTTGTCGA 14638 ||||| ||| ||| ||||| |||||||||||||||||||| || | ||||| Sbjct 1546 AGAACGCCC--GACAACGGCACGTTGGACAGCGTCTTGTGCCAGCCCTGCTCCTGGTCGA 1603 Query 14639 TCTTCGCGCGCAGGCCC 14655 | ||||||||||||| Sbjct 1604 TGCGCGCGCGCAGGCCC 1620 Score = 118 bits (130), Expect = 3e-22 Identities = 280/414 (68%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 13595 GGCGCAGACC--GGCGAGCAGGTCGTTACCGTTGATCTTCTCGATCATGTTGATGAAATC 13652 ||||| |||| ||| || ||||| | ||||||| |||| | ||||| || Sbjct 504 GGCGCGGACCTGGGCCAGGCGGTCGATGCCGTTGACGACTTCGACGAAGTTGACCGGGTC 563 Query 13653 CATCTCGATCAGCTCCTGACCGTTGATGGACAGCTTGTAGTAGCTGGCCGCCGTCGTGAC 13712 |||||||||||| |||| |||||||||||||| |||||||||| | ||| | || Sbjct 564 GATCTCGATCAGCACCTGGCCGTTGATGGACAGGCGGTAGTAGCTGACGGCCAGCTTGTA 623 Query 13713 CTTGAAATCGGTGTCTTCCTTCGGCTTGCCTGAACCCATGTCGATTTCCTTGTGGCGGCC 13772 ||||| ||||| | || | |||| | || ||||| ||| | |||||| Sbjct 624 CTTGATCTCGGTCTTGTCGCCGGCCTTGGCCTTGCCGGGGTCGAACTCCGAGAAGCGGCC 683 Query 13773 GCGCACGACGATTTCGACCGAATCGTAGGTCTTCG-AATCCTCGCGCTGGTAGCCGCCCG 13831 |||| ||| | ||| | ||| || | | ||||| || |||| ||| | |||| | Sbjct 684 ACGCATGACCACTTCCAGCGAGTC-CACGCCTTCGCTGTCATCGCCCTGCAGGGCGCCGG 742 Query 13832 AGAAACGAAGTTGCACGCCGTCGT-GCGTGGTGATGCCGTACAT-GCGAACGACATCCTC 13889 ||| || || |||||||||||| ||| | | |||| | | | || | || |||| Sbjct 743 CGAAGCGCAGCAGCACGCCGTCGTGGCGCAGCG-TGCCCCAGGTGGAGATCAAC-TCCTT 800 Query 13890 CATGAAGCCGCCGCACGTCCATTCGAGCTGGATCGCTTCCTGGCCGAAGTCGATCGGGAT 13949 |||| ||||| | ||| ||| || ||| || ||| ||||||||| | || Sbjct 801 CATGTAGCCGGCAGCGGTCAGGTCGGCCTCGATGGCCTCCATGCCGAAGTCCAGGCTGAC 860 Query 13950 CGGGCCGCTCATGCCGCCGCCCTGGTAGTCCTCCATCTTTCGCGACAGCTTCGG 14003 | |||| ||||||||||| | |||| | ||||||||| || | ||||| || Sbjct 861 CTCGCCGTTCATGCCGCCGGCGCGGTACTTCTCCATCTTGCGGGTGAGCTTGGG 914 Score = 91.5 bits (100), Expect = 4e-14 Identities = 184/272 (68%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 13099 GTCGTCCATGTCGCGCGGTGTCCAGCCGAACACCGTCGCGACGTCGGCCATCGCGTCTTC 13158 ||| |||||||| ||| |||| ||| ||| | || | ||||||||| ||||| || Sbjct 2 GTCCTCCATGTCCGCCGGCCGCCAGTGGAAGACCATGGCCAGGTCGGCCATGGCGTCCTC 61 Query 13159 TACGCGTTCTGGGATTCCATGCTCGCTTTCAGCGCCTTCGGCATCAAAAAACCGGCAAAA 13218 |||||| || || ||| |||| || | |||||||||||| ||||||| ||| | Sbjct 62 TACGCGCTCGGGAATT----GCTCCCTCT--GCGCCTTCGGCACCAAAAAAGAGGCCACC 115 Query 13219 ATACCCCCCAATGCCACGAGGTCGGCCGGGTCCATCAACGTGACATCCATTTCGGTCAGC 13278 || | | ||| |||||||| ||||||| | | || || | | |||| Sbjct 116 TCCGTACCGAGGGTCACCAGGTCGGCGGGGTCCAGCTGCAGCACCTCGGCCTTGTGCAGC 175 Query 13279 GTCGGCGTGGTGATGCGCGGGAGTACCTTGCGCAGCGCGTCCACGTCGAGATTCACGAGC 13338 | ||| ||| | |||||| || | | |||||||| ||||| | | || ||| Sbjct 176 ATGGGCTCGGTCACGCGCGGCAGCAGGGTCTGCAGCGCGGTCACGTTCATGTGCAGCAGC 235 Query 13339 GCCGCGAGCGACGTGCCGCGCAGTGCGCCGGC 13370 | | |||||| ||||||||| |||||||| Sbjct 236 TCGACCAGCGACAGGCCGCGCAGCGCGCCGGC 267 >seq1720 Length=6403 Score = 107 bits (118), Expect = 5e-19 Identities = 177/256 (69%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 15007 CCTTCCGCGACGCGCACGACGACGGTGAC-GGGCTTCGTCTGCTTGCCGATCGCGTCGAG 15065 || || || |||||||||||||| || |||| | ||||| ||| |||| || Sbjct 6311 CCATCGGCCACGCGCACGACGACCAGCACCGGGCGGCA-CTGCTCCTTGATGGCGTTCAG 6253 Query 15066 CGTGCGGCGCAGCGTGCCCTTCGTGCCGGCCTTGCCAAGCGCCGCGATGACGTTCGTCAG 15125 || || |||||||||||| |||||||||||||| | ||||| ||| || || | Sbjct 6252 CGCCTGGGCCAGCGTGCCCTTGGTGCCGGCCTTGCCGATGGCCGCATCGACCTTGGTGAC 6193 Query 15126 CAGCACCGGCGTGTCGAGCGGGAACGTCGCCGGGTCGGCGNNNNNNNNNNTGCAGACGAT 15185 ||||||||| || |||||||| || |||| |||||| || |||| Sbjct 6192 CAGCACCGGACGGTTCAGCGGGAAAGTGGCCGCATCGGCGTCGCTGGCCGTGGCCACGAG 6133 Query 15186 GCCGAGCACGGCCGTGGAGACCGTGCGAATCGGCCGGCCGCCTTCGTTGATTTCGATGAC 15245 ||||| |||||||||||| || |||| || | | ||||||| | | ||| |||| Sbjct 6132 GCCGATCACGGCCGTGGACACGATGCGGATGGAATTGATGCCTTCGCTCACTTCCGTGAC 6073 Query 15246 GCGTACGCCGTGGTGG 15261 ||| | ||| || ||| Sbjct 6072 GCGAATGCCATGATGG 6057 >seq11451 Length=1254 Score = 91.5 bits (100), Expect = 4e-14 Identities = 226/328 (69%), Gaps = 14/328 (4%) Strand=Plus/Plus Query 8763 CTTGAC-GTTCATCACGGCGTCGTAGCGCTTCGCCAGGCGTGT-CAGAAACGACATATCG 8820 |||||| || || |||||||||||| || ||||||||| | ||||| || ||| Sbjct 88 CTTGACCGTGCA-CACGGCGTCGTACTGCCGCGCCAGGCGGCTGCAGAAGTT-CAGGTCG 145 Query 8821 CTTTCGTGCGTCTGGTCGATATGAGCGATGACGATCTTCGCGAGC-GCGTCGGCGACGGC 8879 |||||||| ||||||||||| || | | | | ||| ||| | ||| || | ||| | Sbjct 146 CTTTCGTGGGTCTGGTCGATGTGGTCCACGCGCAGGTTCTCGAACTGCG-CGTCCACG-C 203 Query 8880 GGGCGT-CAGCTTGTAGCGCGCCGCGATCGCGCGCACGATCGAGCCGATCGT-CTGTTTG 8937 | | | ||| || |||| ||| || |||||||||| ||| | ||| ||||| | Sbjct 204 GCACCTGCAGGCCGTTGCGCTGCGCAATGCTGCGCACGATCTGGCCCAGCGTGCTGTT-G 262 Query 8938 TGCCAGCTTTTCTCACGGCGCTCCTGCA--TGCCGTTCGACATCGAGGCCGAGCGTGCGC 8995 || |||| | ||| |||| ||| || || | || ||| |||||||| || Sbjct 263 TGGTAGCTGTGCTCGGAGCGCGTGCGCAGCTGGCGCTTGAGCTCG--GCCGAGCGCGCAT 320 Query 8996 GCACGGTCAGCGTGTCGGGCGCGCCGCTGTGCTCGAACTCGGTCACGACGAACGTGCCCT 9055 |||| | |||||||||| || |||||| | |||| ||| || | ||||||| Sbjct 321 GCACCACGATTCTGTCGGGCGCACCCTGGTGCTCCACCTCGTCCACCTCGTAGGTGCCCT 380 Query 9056 TGTCGACGAGCTGCTCGCCGGCCCAGCC 9083 ||||||| || | |||||||||||| Sbjct 381 TGTCGACCAGGCCGTGGCCGGCCCAGCC 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129599682520806