Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq15573 120 9e-23 >seq15573 Length=905 Score = 120 bits (132), Expect = 9e-23 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 37597 CTGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAG 37656 ||||| ||||| || ||||||||| || || | || ||| ||||||| |||||| Sbjct 499 CTGGCCAAAGAATTCAACTGCCCGGTCATTGCCCTTTCGCAGCTGAACCGCTCGTTGGAG 440 Query 37657 CAGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAG 37716 ||||| | ||||| || ||| || ||||||| ||||| || || | |||||||||| Sbjct 439 CAGCGCCCGAACAAACGCCCGGTGAACTCCGACTTGCGTGAATCTGGTGCAATCGAGCAG 380 Query 37717 GAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAGATG 37776 || || || ||||| | | || || ||||||||| |||| |||| |||| ||| Sbjct 379 GACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCAC 320 Query 37777 AAAGGCGTCACTGAAATCATC 37797 || ||||| | ||||||||| Sbjct 319 AAGGGCGTGGCGGAAATCATC 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151107401879838