Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_015466.1 Length=62668 Score E Sequences producing significant alignments: (Bits) Value seq13677 95.1 5e-15 >seq13677 Length=1044 Score = 95.1 bits (104), Expect = 5e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3942 CAGGTTGAGGGAACCCAGGAGACACGCACCATTCGGCGGAAGCGGTTGCTCCCCACAGGG 4001 |||||||| || ||||| || || || || | |||||| ||||| ||||| || || || Sbjct 465 CAGGTTGACCGAGCCCAGCAGGCAGGCGCCGTACGGCGGTAGCGGCTGCTCGCCGCACGG 524 Query 4002 GTTGGTCGCAGCGATCGTCTCGCAATAATAGAGGTTGTTCATCCGGTTGATGGTGTCGAT 4061 ||||||||| ||| |||||||| | || |||||||||| ||||| | |||||| Sbjct 525 GTTGGTCGCGCGGATGGTCTCGCACCACCAGTTGTTGTTCATCTCGTTGACGCGGTCGAT 584 Query 4062 GAACAAGACGCCAGGGTCTGCGAAGTC 4088 | | || ||| || || ||| |||| Sbjct 585 CAGGATGAAGCCCGGCTCGGCGTAGTC 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200325994890791