Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8878 226 2e-53 seq14357 214 1e-49 seq11257 188 6e-42 seq3663 150 1e-30 seq14623 120 2e-21 seq8376 114 1e-19 seq322 104 2e-16 seq32362 96.9 3e-14 seq2645 96.9 3e-14 seq23314 95.1 1e-13 seq1324 95.1 1e-13 seq27836 91.5 1e-12 seq25614 87.8 1e-11 >seq8878 Length=1618 Score = 226 bits (250), Expect = 2e-53 Identities = 579/877 (66%), Gaps = 6/877 (1%) Strand=Plus/Minus Query 551726 GGGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTAC 551785 ||||||| ||| || |||| || || | ||||| ||| ||||| || || || Sbjct 879 GGGAACTTTTGATGTTTCTCTATTAACTATTGAAGAGGGTATCTTTGAGGTCAAGGCCAC 820 Query 551786 TAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGT 551843 |||||| | ||| | ||||| ||||| ||||||||| | | || | ||| | | Sbjct 819 GGCAGGAGATACCCATTTGGGTGGTGAAGACTTTGATAATCGGTTAGTTAACCAT--TTT 762 Query 551844 GTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGT 551903 | | || |||||| ||||| | || ||||| || ||| | ||| ||| | Sbjct 761 ACTCAGGAATTTAAAAGAAAATATAAGAAAGATCTTGGTAGCAGTGCAAGAGCCCTTAGG 702 Query 551904 CGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACT 551963 | | ||||| || || ||||| || || || | | || || | |||| || || Sbjct 701 AGGTTGAGAACAGCCTGTGAAAGGGCTAAGAGAACGTTGTCTTCAACTGCTCAGACTACC 642 Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023 ||||| | ||||| || | || |||||||||| | | | | ||| | ||||||| | Sbjct 641 ATTGAGATTGATTCTTTGTACGAAGGAATTGATTTTTACTCCACCATTACTAGGGCCAGA 582 Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTT 552082 ||||| || | ||||| ||||| ||| || || || || || |||| ||| Sbjct 581 TTTGAGGAGCTCAACATGGATCTGTTTAGGAAATGCATGGAGCCTGTTGAG-AAGTGTTT 523 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 || ||| | ||||| ||||| || || ||||| |||||||||| || |||||||| Sbjct 522 GAGGGATGCCAAGATGGATAAGAGCACTGTTCATGATGTTGTGCTTGTGGGAGGATCTAC 463 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | || || ||| | | || |||| || ||||||||||| | | | Sbjct 462 CCGTATCCCGAAAGTGCAGCAATTGTTGCAGGATTTCTTCAATGGTAAGGAGCTCTGCAA 403 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 ||| | ||||| ||||| |||||||| |||||||| || ||||||| || ||||| Sbjct 402 GAGTATCAATCCCGATGAAGCTGTTGCTTATGGTGCTGCGGTTCAAGCTGCAATTCTAAG 343 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 |||| || |||| || | ||| | || | ||| | || || ||||| || || || Sbjct 342 TGGAGAAGGAAATGAGAAGGTGCAAGACCTTTTGCTTCTTGACGTCACTCCCCTGTCACT 283 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 || || ||||| | ||||| | |||||| | | ||| || || || || ||||| Sbjct 282 AGGATTGGAAACTGCCGGAGGAGTGATGACTGTTTTGATCCCGAGGAACACAACGATTCC 223 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 | || ||| | || || || || || || || ||||| ||| ||| || || Sbjct 222 TACGAAGAAAGAACAAGTCTTCTCCACATACTCTGACAATCAGCCTGGTGTCTTGATCCA 163 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTT 552502 | | |||||||| |||||| | ||||| || || |||| | |||| ||| | || Sbjct 162 AGTATTTGAAGGTGAAAGAGCAAGAACTAAGGACAACAATCTTTTGGGTAAGTTTGAGTT 103 Query 552503 AGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGA 552562 ||||||||||||||||| | || || || || || ||| || || || || Sbjct 102 GTCTGGTATTCCTCCTGCTCCAAGGGGTGTGCCTCAGATCACTGTTTGCTTTGACATTGA 43 Query 552563 TGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 ||||||||| || |||| || ||||| |||||| Sbjct 42 TGCCAATGGTATCCTGAACGTCTCTGCTGAGGATAAA 6 Score = 196 bits (216), Expect = 4e-44 Identities = 378/550 (69%), Gaps = 7/550 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | |||||||||||| || || || || |||||| ||| Sbjct 1478 GCTATCGGAATCGATCTTGGAACCACATATTCCTGCGTAGGAGTGTGGCAACATGACCGG 1419 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||||||||| ||||| || || | ||||||||||||||||| ||||||| Sbjct 1418 GTGGAGATTATTGCCAACGATCAGGGAAATCGGACTACTCCATCTTATGTAGCTTTCACC 1359 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | || ||||| || ||| |||||| | | ||||| ||||| Sbjct 1358 GACACAGAGCGGCTGATCGGAGATGCCGCCAAAAATCAAGTCGCCATGAATCCCACCAAC 1299 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| ||||| || ||| | |||||||| || || ||| | || || ||| Sbjct 1298 ACAGTTTTCGATGCAAAGCGTCTTATTGGAAGGAGATTCTCCGATCCAACAGTCCAGAAT 1239 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC--TGGAAAACCTTAT-ATTGAA 550288 || |||||| ||||| ||| || | || || | ||| || | ||| |||| Sbjct 1238 GACATGAAGTTGTGGCCCTTCAAAGTCATTTCTGGGCCAGCGGAGAAGCCTATGATTGTT 1179 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | |||| | ||||| | || ||||| | |||| ||||||| || |||||| | Sbjct 1178 GTTACTTACAAAGGAGAAGAAAAGCAATTCGCTGCAGAGGAAATTTCTTCGATGGTTCTG 1119 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGAAGTTACGGATGCAGTAAT 550407 | |||||||| | | || || | | |||| | | | | | | | || || | Sbjct 1118 ACTAAAATGAAGGAGATTGCTGAAGCGTATCTTGGAACCACCA-TCAAGAACGCTGTTGT 1060 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT-A 550466 || || || |||||||| |||||||| || | || ||||| || ||||| || ||| | Sbjct 1059 TACAGTCCCTGCATATTTCAATGACTCTCAGAGGCAGGCTACAAAGGATGCCGG-CGTCA 1001 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 || ||||||| ||||| | | || ||||| ||||| ||||| || ||| |||| |||| Sbjct 1000 TTTCTGGACTAAATGTGATGAGAATCATCAACGAACCAACTGCAGCCGCAATTGCTTATG 941 Query 550527 GACTTGATAA 550536 | || || || Sbjct 940 GGCTGGACAA 931 >seq14357 Length=991 Score = 214 bits (236), Expect = 1e-49 Identities = 375/543 (69%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||||||| | || ||||| ||| || ||||| || ||||| ||| | | Sbjct 875 GCGATCGGTATAGATCTCGGTACCACGTATTCCTGCGTTGGGGTGTGGCAGCATGACAGA 816 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || |||||||| ||||| ||||| || ||||| || ||||| ||||||| Sbjct 815 GTGGAGATCATCGCCAATGACCAAGGGAACAGGACCACTCCCTCCTATGTGGCTTTCACT 756 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | |||| || || ||||| |||| | | | |||||||||||| Sbjct 755 GATACTGAGCGACTCATTGGAGACGCCGCAAAGAATCAGGTCGCCATGAATCCTACCAAT 696 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||||||||| || | || |||||||| |||| | ||| | ||||||||| Sbjct 695 ACCGTTTTTGATGCCAAGAGATTGATTGGAAGGCGTTTCAGTGACACTACTGTTCAGAGT 636 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAAT----GTTTCTG--GAAAACCTTAT-AT 550284 || || ||| |||||||| | |||||| | ||| || || | || || Sbjct 635 GACATCAAGTTGTGGCCTTTTAA----GTTAATTCCGGGGCCTGCCGACAAGCCCATGAT 580 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 || | || | | |||| | || || || | |||| | |||||||| ||||| Sbjct 579 TGTTGTTAATTACAAAGGCGAGGAGAAGCAGTTCGCTGCAGAGGAGATTTCATCCATGGT 520 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 |||||||| |||| | | || |||| ||||| | | | | |||| || Sbjct 519 GTTAATGAAGATGAGGGAGATTGCAGAGGCTTACCTTGGTGTCACAATAAAGAATGCCGT 460 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | ||||| || |||||||| |||||||| || | || ||||| || ||||||||| Sbjct 459 TGTCACTGTTCCTGCATATTTCAATGACTCCCAGAGGCAGGCTACCAAGGATGCTGGAGT 400 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | ||||| | | || |||||||| |||||||||||||| |||| || Sbjct 399 GATTGCTGGGTTGAATGTGATGAGAATAATCAATGAGCCTACTGCTGCTGCTATTGCCTA 340 Query 550525 TGG 550527 ||| Sbjct 339 TGG 337 >seq11257 Length=1275 Score = 188 bits (208), Expect = 6e-42 Identities = 376/547 (69%), Gaps = 10/547 (2%) Strand=Plus/Minus Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTTAAGAGATTCAAAGATTGA 552100 ||||| || ||||| || || || || ||| |||| ||| |||||| | ||||| || Sbjct 1216 GATCTATTCAGAAAGTGTATGGAGCCTGTTGAA-AAGTGTTTGAGAGATGCTAAGATGGA 1158 Query 552101 TAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCG 552160 |||| | | ||||| |||| | |||||||| ||||| |||||||| ||| | | Sbjct 1157 TAAAAGCTCTATCCATGATGTTGTTTTGGTTGGTGGGTCTACTAGAATTCCCAAAGTGCA 1098 Query 552161 CGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG--TTAATCCAGA 552217 | |||| || ||| ||| ||||| ||| | | || ||| | |||| || || Sbjct 1097 ACAGTTGTTGCAGGACTTCTTT-AATGGGAAAGAGCTC--TGCAAGAGCATTAACCCCGA 1041 Query 552218 TGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGA 552277 ||||||||||||||||||||| ||| | || || |||||||| ||| || |||| Sbjct 1040 TGAGGCTGTTGCCTATGGTGCTGCAGTGCAGGCTGCTATTCTAAGCGGAGAAGGCAATGA 981 Query 552278 AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGT 552337 || | ||| | | ||||| | || || |||||| || |||||| | || |||| Sbjct 980 GAAGGTTCAAGACCTGTTACTTCTTGACGTATATCCTCTCTCCCTTGGTCTGGAGACAGC 921 Query 552338 TGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCG 552397 || ||| |||||||| | | || |||||||||||| |||||| || ||| | Sbjct 920 AGGCGGTGTTATGACTGTTTTGATTCCTAGAAATACTACCATTCCTACAAAGAAAGAGCA 861 Query 552398 TGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGA 552457 || || ||||| || || || || || | | |||| |||||| | | |||||| || Sbjct 860 GGTCTTCTCTACATACTCGGACAACCAGCCCGGTGTTCTCATTCAAGTGTATGAAGGTGA 801 Query 552458 AAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCC 552517 |||| | || | ||| || ||| | || | ||| | || ||||| || || Sbjct 800 GAGAACACGAACAAGAGACAACAATTTGTTGGGCAAGTTTGAATTGTCTGGTATCCCACC 741 Query 552518 TGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATATCGATGCCAATGGAATTT 552576 |||||| | || || || ||||| ||| | |||| || || ||||||||||| || | Sbjct 740 TGCTCCCAGAGGTGTTCCTCAAATCACAGTGTGCTTT-GACATTGATGCCAATGGTATCT 682 Query 552577 TGAATGT 552583 ||||||| Sbjct 681 TGAATGT 675 >seq3663 Length=3564 Score = 150 bits (166), Expect = 1e-30 Identities = 376/565 (67%), Gaps = 16/565 (3%) Strand=Plus/Plus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 || |||||||| ||||| |||| | || || |||||||||||||| || || || | Sbjct 1226 TGCGTTGGTGTGTGGCAGAATGATCGCGTGGAGATTATTGCCAATGACCAGGGCAATCGT 1285 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || || || ||||| | |||||||| || || | | || |||||||||| || || Sbjct 1286 ACCACGCCGTCGTATGTGGCGTTCACGGACACGGAGCGTCTAATTGGTGATGCTGCTAAG 1345 Query 550145 TATCAAG---CCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGA 550201 | |||| ||| || || | ||||| | ||||||| |||||||| || ||| Sbjct 1346 AACCAAGTGGCCA-TG--AACGCGCATAATACGGTCTTTGATGTCAAACGTTTGATCGGA 1402 Query 550202 AGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTT 550261 | | || | || | || ||| | || || ||||||||||| || || || Sbjct 1403 CGTAAATTCACGGACACAGAGGTGCAGTCGGACATTAAGCATTGGCCGTTTAAAGTTACG 1462 Query 550262 AATGTTTCTGGAAAA---CCTTA--TATTGAAGCTACTCATGAAGGATCTGTTAAACAAT 550316 || ||| || ||| | || || || | | ||||| || || Sbjct 1463 CGTGGCCCTGATAACAAGCCTCAAGTAGTGGTGCAATCGA--AAGGAGAGACGAAGACAT 1520 Query 550317 TTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTT 550376 || ||| ||| | ||||| || ||||| || || |||||| | | || |||| Sbjct 1521 TTCAACCGGAAGAGATTTCGTCCATGGTGTTGATTAAAATGCGCGAGATTGCAGAGGCTT 1580 Query 550377 TTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCAC 550436 |||| || |||| | | |||| || | || || || || ||||| |||||||| | Sbjct 1581 ACATTGGGAAACAAGTGAAGAATGCCGTGGTGACGGTTCCTGCTTATTTCAATGACTCGC 1640 Query 550437 AACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCA 550496 | ||||| || || |||||||||||| ||||||||||| || || || ||||| || | Sbjct 1641 AGCGTCAGGCAACGAAAGATGCTGGAGTGATTGCTGGACTGAACGTGCTACGTATCATTA 1700 Query 550497 ATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTA 550556 | || || ||||||||||| | || || || | || | | || | | ||||| | Sbjct 1701 ACGAGCCAACTGCTGCTGCGATCGCCTACGGTTTGGACAGA---AAGGGTGGAGAACACA 1757 Query 550557 ATGTACTCATCTTTGATTGTGGAGG 550581 |||| || ||||||||| ||| || Sbjct 1758 ATGTGCTGATCTTTGATCTTGGTGG 1782 Score = 116 bits (128), Expect = 3e-20 Identities = 537/839 (64%), Gaps = 21/839 (3%) Strand=Plus/Plus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAA 551858 ||||| || || ||||||||||| ||| ||| || | | ||| | || ||||| Sbjct 1856 CATCTGGGAGGTGAAGATTTTGACAATCAACTTGTGGAGTACTTTGTGGCGGAGTTTAAG 1915 Query 551859 CGAAAAAAC---AAAGTTGATCTATCTACA--TCTGCCAAAGCTCTTCGTCGTCTAAGAA 551913 || ||| || |||| || | | ||| || || || ||||| || || | | Sbjct 1916 CGCAAATACCGTAAAG---ATATGGCGACAAGTCAGCGT--GCGCTTCGACGCCTTCGCA 1970 Query 551914 CTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAG 551973 | ||||| || |||| || ||| || | || || ||||| | ||||| | | Sbjct 1971 CAGCTTGTGAGCGAGCAAAGCGAACTTTATCTGCTTCGGCTCAAGCGTACATTGAGATCG 2030 Query 551974 ATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATA 552033 || | | | ||| || ||||||| ||| || | ||| | | || ||| || || Sbjct 2031 ATACGCTGTATGAAGGTATTGATTTTAACTCGACGATTACCCGAGCGCGATTCGAGGAAC 2090 Query 552034 TTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAA 552093 | ||| | ||||| | || || || ||||| || | ||||| ||| | || | | Sbjct 2091 TGTGTGGAAGTTTCTTTCGCAAGACGATGGAACCCGTTGCTCAAGTGTTACGCGACGCCA 2150 Query 552094 AGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTA 552153 || | || | || ||||| ||||| | |||||||| || || ||||||| | Sbjct 2151 AGCTGTCCAAGAGTCAGGTGAATGAAGTTGTGTTGGTTGGTGGTTCGACTCGAATTCCAA 2210 Query 552154 AAATTCGCGAAATGTTAA-GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG--TTA 552210 || | | | |||| | | ||| ||||||||| ||| | || | |||| ||| Sbjct 2211 AAGTGCAGCAGTTGTTGATGGACTT-TTTCAATGGGAAAGAGTTG--TTCAAGTCGATTA 2267 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG-ACAA 552269 ||||||| || ||||| || ||||| || | | ||||| || ||| | ||| | Sbjct 2268 ATCCAGACGAAGCTGTGGCTTATGGAGCTACTGTGCAAGCTGCAATTTTGGGTGGTAGTG 2327 Query 552270 ACTGATGAA--AAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 | | || || | || || | | || | ||||| |||| | || ||||| | Sbjct 2328 AGTCATCTTCCAAGTTGCAGGATTTGTTGCTGTTGGATGTAGCTCCGTTGTCGCTTGGCT 2387 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | || |||| || || | ||||| || || || | |||||||| ||||| | Sbjct 2388 TGGAGACAGCAGGTGGAGTGATGACGAAACTCATTCCACGTAATACTACGGTTCCTGCGA 2447 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 | || || | ||| || |||||| | ||||| || ||| ||| |||||| | | Sbjct 2448 AGAAGTCGCAAACATTCTCGACGTATGCTGATAACCAGCCTGGTGTATTGATTCAAGTGT 2507 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 ||||||| || | | || | |||||| ||| || || | ||||| | || | Sbjct 2508 TTGAAGGCGAGCGCTCGATGACGCACGATAATCATCTTCTGGGCAAGTTTAACCTGGATG 2567 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 |||| || || || | || || || |||||||| || || || ||||| |||| | Sbjct 2568 GTATACCGCCCATGCCAAGAGGTGTGCCTCAAATTGACGTGACGTTTGATATTGATGTGA 2627 Query 552568 ATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAAC-AAGAGTAAAAATATTAC 552625 |||| |||||||||||| | || || ||||| ||| | ||||| || || ||||| Sbjct 2628 ATGGGATTTTGAATGTGTCGGCGGTGGAGAAATCGAGCGGCAAAGAG-AACAAGATTAC 2685 >seq14623 Length=969 Score = 120 bits (132), Expect = 2e-21 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| |||||||| |||||||| || || ||| || ||||||||||| || || || Sbjct 255 CCTCAGACGGAGGACAAGATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGT 196 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || |||||| || || ||||| ||||| || || | || || || || ||||| || Sbjct 195 TCGGCCATCTTCCAGCTGCTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCC 136 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGA 563431 ||| ||||| || |||||| ||||| ||||| || |||| | | || ||| | Sbjct 135 TTCCTTATCCTGGATTTTTGCCTTTACATTGTCAATGGTGTCAGAGCTCTCGAC-TTCAA 77 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| | || || || ||||||||||| ||||| |||||||| Sbjct 76 GAGTGATGGTCTTGCCGGTAAGAGTTTTGACGAAGATTTGCAT 34 Score = 107 bits (118), Expect = 2e-17 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| | |||||| || ||||| ||||| ||| || ||||||||| || || || || Sbjct 483 CCTCAAACGGAGGACGAGATGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGCCAGGGT 424 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 || ||||| || || ||||||||||| || || | |||||| ||||| || ||||| Sbjct 423 TCGGCCGTCTTCGAGCTGCTTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGGGATTCC 364 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 ||| || || || || || |||||| ||||| ||||| | | | ||| | Sbjct 363 TTCCTTGTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAA 304 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || |||||||| || ||||| ||||| || ||||| Sbjct 303 CGTTATCGTCTTACCAGTCAGGGTTTTGACGAAGATCTGCAT 262 Score = 91.5 bits (100), Expect = 1e-12 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| |||||||| || || || | ||| |||||| || |||||||| || || || Sbjct 711 CCTCAGACGGAGGACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGGGT 652 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 ||| ||| || || || ||||||||||| || | | ||||| ||||| ||||| || Sbjct 651 TCTACCATCCTCGAGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGAATGCC 592 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 ||||| || || || || || || ||||| ||||| | | | ||| | Sbjct 591 CTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTATCCGAGCTCTCAACTTCCAA 532 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || ||||| || |||||||| ||||| |||||| Sbjct 531 GGTGATCGTCTTTCCAGTGAGGGTTTTAACAAAAATCTGCATA 489 >seq8376 Length=1716 Score = 114 bits (126), Expect = 1e-19 Identities = 360/550 (65%), Gaps = 7/550 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | |||||||| || || || || || ||||| ||| Sbjct 1620 GCAATCGGCATCGACCTCGGAACCACGTACTCGTGCGTCGGAGTGTGGCAGCATGACCGT 1561 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || || |||||||| || || || || ||||| | ||||| Sbjct 1560 GTCGAGATCATCGCCAACGACCAGGGTAACAGGACGACGCCGTCCTATGTCGCCTTCACC 1501 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || | || | | || ||||| || || | || | | | || || | ||| Sbjct 1500 GACAGCGAGAGGCTGATAGGCGATGCCGCTAAGAACCAGGTCGCCATGAACCCGATCAAC 1441 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | ||||||||||| || || ||||||||||| || | ||| || | ||||||| Sbjct 1440 ACCGTCTTTGATGCTAAGCGGTTGATTGGAAGAAGATTCAGTGACTCCTCAGTTCAGGGT 1381 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTG--GAAAACCTTAT-ATTGAA 550288 |||||||||| ||||||||| | | || || | ||| || || | || |||| Sbjct 1380 GATATGAAGCTATGGCCTTTCAAGGTCATTGCTGGTCCTGGTGACAAGCCCATGATTGTT 1321 Query 550289 G-CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | ||| | | || | ||||||||| | | || | || || || |||||| | Sbjct 1320 GTCAACT-ACAAGGGTGAGGAGAAACAATTTGCTGCTGAGGAGATCTCTTCCATGGTTCT 1262 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAA 550406 || || ||| | | || |||| | || || || || | | |||| || Sbjct 1261 CATCAAGATGCGTGAGATTGCTGAAGCTTACCTCGG-CACGACTGTGAAGAATGCTGTTG 1203 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || || || || || |||||||| || | || || || || ||||| || | Sbjct 1202 TCACGGTTCCTGCTTACTTCAATGACTCCCAGAGGCAGGCCACCAAGGATGCCGGGGTCA 1143 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | ||||| || || || | || || ||||||||||| || ||||| || |||| |||| Sbjct 1142 TCGCTGGTCTGAACGTGATGCGCATCATCAATGAACCCACCGCTGCGGCCATTGCCTATG 1083 Query 550527 GACTTGATAA 550536 | ||||| || Sbjct 1082 GTCTTGACAA 1073 >seq322 Length=19266 Score = 104 bits (114), Expect = 2e-16 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 602748 AAAATACCAATTTTCCATATGGAAGCTGGTAATCGTTGTTTTGATCAATTGGTTCCTGAA 602807 || || |||| ||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 16336 AAGATTCCAACTTTCCATATGGAAGCGGGTAATCGTTGTTTTGATATGCGAGTTCCTGAA 16277 Query 602808 GAAATTAATCGTAAATTAGTGGATCATATTAGTGATATTAATTTACCTTA 602857 |||||||| ||| | || ||||||| | ||||||||||||| |||| Sbjct 16276 GAAATTAACCGTCGTATTGTCGATCATACTGCTGATATTAATTTAACTTA 16227 >seq32362 Length=298 Score = 96.9 bits (106), Expect = 3e-14 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | ||||| ||||| ||| ||| || || || ||||| || ||||||| Sbjct 223 AGACGCAAGACAAGGTGAAGTGTAGATTCCTTCTGGATGTTATAATCGGCCAGAGTTCGC 164 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || || ||||| || ||||| || || || ||||||||||| ||||| ||||| Sbjct 163 CCATCCTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGATCAGGTGGAATCCCTTCC 104 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 || || |||||||| |||||| ||||| ||||| Sbjct 103 TTGTCCTGAATTTTCGCTTTTACGTTATCAATCGTATC 66 >seq2645 Length=4709 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || ||| | ||||| ||||| ||||| || ||||| || ||||| || || ||||||||| Sbjct 4084 GCCGTAGTCACTGTGCCAGCCTATTTCAACGACTCTCAGCGTCAGGCCACGAAAGATGCT 4025 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||||||||||| | || || ||||| || || || ||||| |||||||| || Sbjct 4024 GGCAAAATTGCTGGACTGGACGTGCTCCGTATCATTAACGAGCCTACGGCTGCTGCCCTG 3965 Query 550520 GCATATGG 550527 || || || Sbjct 3964 GCCTACGG 3957 >seq23314 Length=550 Score = 95.1 bits (104), Expect = 1e-13 Identities = 194/286 (68%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 || || ||| | ||||||||||| || || ||||| | ||||| |||| ||| | ||| Sbjct 379 ATCGTGCTTCTTGATGTTACTCCGCTGTCACTTGGACTGGAAACTCTTGGTGGTGTAATG 320 Query 552351 ACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG 552410 || || | || | | || ||||| | || ||||||| || ||||||||| Sbjct 319 ACGAAAATCATTCCTCGGAACACTACACTACCAACCTCAAAATCTGAGGTGTTTTCTACG 260 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTG-AAGGAGAAAGAAAATTCAC 552469 | | ||| ||| || |||| ||| ||| || || |||| ||| || |||| Sbjct 259 GCTGCTGATGGTCAGACAAGTGTTGAAAT-CAATGTTCTGCAAGGTGAACGAGAATTTGT 201 Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529 || || || || ||||| | |||| || || || |||||||||||||| || || Sbjct 200 CAAGGACAACAAGTCGCTTGGGAGTTTTCGGTTGGATGGAATTCCTCCTGCTCCCCGAGG 141 Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATT 552575 || || ||||| || || | || ||||| ||||| || || ||| Sbjct 140 TGTCCCTCAAATAGAGGTGAAGTTTGATATTGATGCAAACGGTATT 95 >seq1324 Length=7794 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || |||||| || ||||| || || || || || || ||||| || | |||||| Sbjct 6220 GGTGAAACAGTTACAGAAGCAGTTATTACAGTTCCTGCTTACTTTAACGATGCTCAACGT 6279 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 ||||| ||||||||||| || || ||||| | | ||| ||||| || || ||| Sbjct 6280 CAAGCAACTAAAGATGCGGGTAAAATCGCTGGTTTAGACGTTAAACGTATCATTAACGAA 6339 Query 550502 CCTACTGCTGCTGCACTTGC 550521 || ||||||||||||||||| Sbjct 6340 CCAACTGCTGCTGCACTTGC 6359 Score = 89.7 bits (98), Expect = 4e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 361717 TGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGC 361776 || |||||| |||||||||||||| || |||| | | || || ||||| || Sbjct 6354 TGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAACGTCTAAACCAGCGATTTTACCCGC 6295 Query 361777 ATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTT 361836 |||| ||| ||||||||||| ||||| ||||| || |||||||| ||||| ||||||| Sbjct 6294 ATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAAGCAGGAACTGTAATAACTGCTTC 6235 Query 361837 TTCAACT 361843 | |||| Sbjct 6234 TGTAACT 6228 Score = 89.7 bits (98), Expect = 4e-12 Identities = 203/301 (67%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGT--ATTATGACTAATCT 552358 |||| || || || || || | ||| | |||||| | || ||| |||| || |||| Sbjct 7001 TAGACGTAACACCATTAACTTTAGGTATTGAAACAATGGGTGGTGTATTAACACCAATC- 7059 Query 552359 TATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGA 552418 || || | ||| || || |||||| || ||||| | || || ||||| | | || Sbjct 7060 -ATTGAGAAAAACACGACGATTCCTGCGAAGAAATCACAAGTGTTCTCTACTGCTGCTGA 7118 Query 552419 TAATCAAACTGCTGTT-ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATA 552477 || || ||||||| ||| ||| ||| |||| ||| | || | || || | | Sbjct 7119 CAACCAGCCTGCTGTAGACATTTCTG-TTTACCAAGGTGAACGTAAGATGGCTCAACAAA 7177 Query 552478 ATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGC 552537 | || | |||| || | |||| | ||||| |||||||| ||||| || || | Sbjct 7178 ACAAATTGTTGGGTAACTTCCAATTAGGCGACATTCCACCTGCTCCACGTGGTGTGCCAC 7237 Query 552538 AAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATA 552597 |||||||||| ||||||| ||| |||| |||| || ||||| || ||||| |||| Sbjct 7238 AAATTGAAGTATCTTTCGACATCAATGCTGATGGTATCTTGAAAGTATCTGCTAAAGATA 7297 Query 552598 A 552598 | Sbjct 7298 A 7298 >seq27836 Length=415 Score = 91.5 bits (100), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || || |||||||| ||| || |||||||||||| || ||||| | Sbjct 176 GAGACGGAGCACCAGGTGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCCAGAGTACG 117 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| || || || |||||||| || | || ||||| ||||| |||||||| || Sbjct 116 ACCATCTTCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCAGGTGGAATTCCCTC 57 Query 563376 TTTATCTTGAATTTT 563390 || || || || || Sbjct 56 CTTGTCCTGGATCTT 42 >seq25614 Length=477 Score = 87.8 bits (96), Expect = 1e-11 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| || || | ||| ||||| ||| || ||||||||||||||| | || Sbjct 50 CTTAGACGAAGCACCAAATGCAGGGTCGATTCCTTTTGAATATTGTAATCAGCCAAGGTC 109 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || ||| || || || || || || || ||||| || ||||| ||||| ||||||||| Sbjct 110 CTGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCT 169 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || || || || || || || ||||| || || | | | ||| | Sbjct 170 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGCTCTCAACTTCCAAT 229 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || || ||||| || ||||| || || |||||||| Sbjct 230 GTAATTGTCTTTCCAGTTAGTGTTTTTACAAAGATTTGCAT 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027416537399110