Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq11529 104 4e-17 seq29522 100 5e-16 >seq11529 Length=1246 Score = 104 bits (114), Expect = 4e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 16822 AATGTGGCGCTCGTGACAGGGCTCGAACCTGTGACATACGGATTAACAGTCCGCCGTTCT 16881 |||||||| | |||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 468 AATGTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCT 409 Query 16882 ACCGACTGAACTACA 16896 ||||||||||||||| Sbjct 408 ACCGACTGAACTACA 394 >seq29522 Length=371 Score = 100 bits (110), Expect = 5e-16 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 16034 AAATTATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCT 16093 ||||| |||||||||| || ||||||||| ||||||||||||||||||||| |||||| Sbjct 282 AAATT-TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCT 224 Query 16094 CTAACCGTCTGAGCTACGGGGCCG 16117 |||||| |||||||| ||||||| Sbjct 223 CTAACC-ACTGAGCTAAGGGGCCG 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910689657701480