Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq31728 104 6e-18 >seq31728 Length=314 Score = 104 bits (114), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 36206 TCAAGCTGCGCCTGGCTGATAACACGTTCTACACGCCGGACTTCGCAGTGATGCTAACCA 36265 |||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| Sbjct 260 TCAAGCTGCGCCTGGCCAAGTCGACGTTCTACACGCCGGACTTCGCCGTGCTGCTGGCCA 201 Query 36266 GTGGTGAGATGGAACTGCACGAGGTGAA---AGGATTCTGGACCGACGACGCCAGGGTGA 36322 | || || ||||| ||||||||||| || |||| ||||||||| |||||| Sbjct 200 GCGGGCAGCTGGAATGCCACGAGGTGAAGGGTGGCCACTGGGAAGACGACGCCCGGGTGA 141 Query 36323 AAACCAAAGTCGCAGCAGACCAGTACCCGTTTCGCATC 36360 | | ||| || || || | | || |||||| ||| || Sbjct 140 AGATCAAGGTGGCCGCGGCCATGTTCCCGTTCCGCTTC 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123615009272628