Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq17479 95.1 8e-15 >seq17479 Length=794 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 70591 GATAAGATCCATAAAGTAATCGCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCT 70650 || || |||||| || ||| ||||| ||||| ||||| | || || || | ||| Sbjct 247 GACAAAATCCATCGTGTTCTCGACTGGGCAGCAGAAGGACTGAACAACGTATCTATTTCT 188 Query 70651 CAAGTTGAATTGAAATCTCATATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCAC 70710 || || ||| || |||||| ||||| || ||||| || || || || ||||| ||| Sbjct 187 CAGGTGGAACTGCGATCTCACATCCAGTTCTATGACGGCATCAAAACGTCTGATATCCAC 128 Query 70711 GAAATAATCATTAAAGCAGCAGCAGATTTAATATCGGTTGACACTCCTGATTATCAGTAT 70770 |||| || || ||||| || || ||| | || || || | || ||||||||||| Sbjct 127 GAAACCATTATCAAAGCTGCGGCGGATCTGATCTCCCGCGAAGCACCGGATTATCAGTAC 68 Query 70771 CTCTCATCTCGTTTAGCCGTATTTCATTTACGTAAACAAGCCTATGGTGATTTTG 70825 ||| | | ||| | ||| | || || | |||||| |||| || || | |||| Sbjct 67 CTCGCTGCCCGTCTGGCCATTTTCCACCTGCGTAAAAAAGCTTACGGCCAGTTTG 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335525010555163