Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq1466 473 5e-129 seq10062 315 3e-81 seq23830 221 5e-53 seq23194 185 3e-42 seq6074 156 2e-33 seq1840 123 1e-23 seq14555 114 5e-21 seq17070 95.1 5e-15 seq19829 91.5 6e-14 seq10753 87.8 7e-13 seq7046 87.8 7e-13 seq1293 86.0 2e-12 >seq1466 Length=7219 Score = 473 bits (524), Expect = 5e-129 Identities = 824/1179 (70%), Gaps = 50/1179 (4%) Strand=Plus/Plus Query 24136 TGCCCTTCCGGCCGAACCGCGCGCAGCGCCGGCTCCTGCGCCGCCTCTGGCACCGCAACG 24195 |||| || ||||| || ||||||||| ||| || | |||| ||||||||||||||| Sbjct 3128 TGCCTTTTCGGCCCAATCGCGCGCAGAAGCGGTTCATCAGCCGGCTCTGGCACCGCAACA 3187 Query 24196 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACGCTCATCTGCATCATCTGGCTCGACC 24255 ||||||||||||| || ||||||||||| ||||| || ||| |||| | ||||| |||| Sbjct 3188 TCATCCTGAAGGCGCGGCAGCTCGGCTTCACCACACTGATCGCCATCCTGTGGCTGGACC 3247 Query 24256 ACGCGCTGTTCAACGCCAA-CAGCCGGTGCGGCATCATCGCGCAGGACCGCGAGACGGCC 24314 | ||||||||||| || | |||| | ||||||||||||||||| ||||||||| ||||| Sbjct 3248 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGACCGCGAGGCGGCC 3306 Query 24315 GAGGCGATCTTTCGCGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGNNN 24374 ||||| ||||| || ||||||||||| | ||||||||| ||||||||||||| | | Sbjct 3307 GAGGCCATCTTCCGGGACAAGGTGAAATACGCCTACGAGAACCTGCCCGAGGAGATCCGC 3366 Query 24375 NNNNNNATGCCGCTCGC---CAACTGCACGAAGTCTGAGATGTTGTTCGGCCACANNNNN 24431 | || || || | | | || | || || | |||| ||||| Sbjct 3367 GACCGCTTCCCCCTGGCACGCGATAGTGCGGTG---GAACTGCTTTTCGCCCACAACAAC 3423 Query 24432 NNNNNNNTCCGCGTCGCGACGTCCGTGCGCGGCGGCACGATCCACCGCCTGCACATCTCC 24491 | ||||| || || ||| ||||| ||||| |||||| | |||||| ||||| Sbjct 3424 AGCAGCGTGCGCGTGGCCACCTCCATGCGCTCGGGCACCATCCACAGGCTGCACGTCTCC 3483 Query 24492 GAGTTCGGAAAGATCTGTGCGAAGTACCCGGACAAGGCCAAGGAGGTCGTGACCGGCTCC 24551 ||| | || ||||||| ||| | |||| |||||||||||||||| ||||||||||| Sbjct 3484 GAGCTGGGCAAGATCTCGGCGCGCTTCCCGCACAAGGCCAAGGAGGTGATGACCGGCTCC 3543 Query 24552 ATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCGCGAG 24611 |||||||||||||| | ||||||| ||||| |||||| |||||||| ||| | | Sbjct 3544 ATCCCGGCCGTGCCCACCACGGGCATCCTGGTGATCGAGAGCACGGCCGAAGGCGCCAAC 3603 Query 24612 GGCGAGTTCTACGAGATCACGAAGCGGGCCGAGGC---GCTCGACCAGCAGAAGGACCGG 24668 |||||||||||| | | | |||| || ||||| || | || ||| ||| | Sbjct 3604 GGCGAGTTCTACCACCTGTCCCAGCGTGCGGAGGCCCTGCACTACACGCACAAGAA---- 3659 Query 24669 CCGCTGTCGCCGCGCGACTACCGGTTCCACTTTTATCCGTGGTTCGAGGAGCCGAACTAC 24728 |||| ||||||||||| || |||||||| ||| | |||| ||||||| |||||| Sbjct 3660 --GCTGAGTCCGCGCGACTATCGCTTCCACTTCTATGCCTGGTGGCAGGAGCCCAACTAC 3717 Query 24729 CGCATGGACCCCGCCGGCGTCGTC---GTGAC---CGAGAAGGACGCCGAGTATTTCACG 24782 |||||||| ||| || | ||| || || |||| || | ||| |||||| Sbjct 3718 CGCATGGA---CGCGGGTCTGGTCCATGTCACGCGCGAGCAGCA---CGACTATTTCGAC 3771 Query 24783 CAGGTCGAGG-CGCGCATGGGCGTGACGCTCGATGCCGAGCAGCGTGCTTGGTACGTCGC 24841 |||||||||| || | ||| || ||||| |||||||| || ||||| || || Sbjct 3772 CAGGTCGAGGTCGAG-ATGCAGAGCACCATCGATCTGGAGCAGCGGGCCTGGTATGTGGC 3830 Query 24842 CACGCGCGACGCAGACTTTTCCGGCAGCG-AGGAGCGTATGTGGCAGGAATACCCGTCCA 24900 ||| | || || ||||| ||||| ||| ||||| ||||||||||| ||||| |||| Sbjct 3831 CACCCAGGAAGCGGACTTCCCCGGC-GCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCA 3889 Query 24901 CCCCTGAAGAACCGTTCATGGTGTCGACCGAGGGCACCTACTACGCGCAGCAGCTCGCCG 24960 | |||| || | ||| ||||| || |||| |||||||| || | | || Sbjct 3890 CGCCTGCCGAGGCATTCCAACAGTCGAGCGCGGGCCGGTACTACGCCAAGGCCATGGTCG 3949 Query 24961 CG-GCGCGCAAGCAAGGCCGCATCAAGCCGTCCCTGCCCGTGCTGTTCAACGTGCCGTGC 25019 || | || |||| ||| | |||| | || |||| | |||| | ||||| | Sbjct 3950 CGCTCACG-AAGCGCGGCGGTATCA---CCTCGGTGCCAGAGCTG---GATCTGCCGGTC 4002 Query 25020 TTCACGTTCTGGGACATCGGCAACAGCGACGGCACGGCGATCTGGGTGTTCCAG-CGCAT 25078 | ||| |||||||| ||||| | ||||| ||||| |||||| | | ||| | | Sbjct 4003 TACACCTTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTG 4062 Query 25079 CGAGCACGAGTGGCGCTGCATCCGATTCAAGGAGG-GCTGGGGCGAGCCGTACAGCTTCT 25137 || | |||| |||| |||| | | | |||| || | | || | | | || || Sbjct 4063 CGCG-GCGAGGATCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-ACT 4120 Query 25138 ACGTGAAGTGGCTCCAGGAGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGACG 25197 ||||| || ||||| |||||| ||||| | | || |||||||||||||||| Sbjct 4121 ACGTGCGCCACCTGCAGGACCTCGGCTACGTGTTCGGCGCGCACTTCCTGCCGCACGACG 4180 Query 25198 CCGACCACGTGCGTCAGGGTCAGACGACCAACAAGAGCC-CGAAGCAGATGCTCGAGGAG 25256 | | ||| ||| | ||| ||| |||||| || || | |||||| ||| ||| Sbjct 4181 CGAATCACAAGCGCCTGGG--CGAC-ACCAAC-CGATCCACCAAGCAGCAGCTGCAGGCC 4236 Query 25257 CTGATGCCGGGCGTGCGCTTCGAGGTCGTGCCGCGCATC 25295 || ||||| ||| | ||| || |||||||||||| Sbjct 4237 CTCATGCCTGGCCAGAAATTCACCGTGGTGCCGCGCATC 4275 Score = 82.4 bits (90), Expect = 3e-11 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 18456 GGCGGCATCGGCTACGACCCGCGCAAGCCGCCCGTCGACGATTGCCCGGAGTGCTTCGGC 18515 ||||||||||||| | | || | | |||||| | || ||| | | ||| | ||| Sbjct 2571 GGCGGCATCGGCTTCAATCCTCACCGGCCGCCGCACCCGGAGTGCACTGCATGCGTTGGC 2630 Query 18516 GAGGGCTACG-GCGACGTGTTCGTGAAGGACACGCGCAACCTGTCGCCGGA-GCTGCGCA 18573 || || || | ||| || | || | |||||||| |||| |||| |||| || | || Sbjct 2631 GATGGATATGCGCG-CGAGGTCATCAAGGACACCCGCACCCTGAGCCCGGCCGCAGTCCA 2689 Query 18574 GCCTGTACGCCGGCGTGAAGCGCACGAAGGAAGGCATCGAGGTCAAGATGCACGACAAGC 18633 || | || ||||||||||||||||| |||||||| | ||||| ||||||| |||| Sbjct 2690 GC-TCTATGCCGGCGTGAAGCGCACCAAGGAAGGGCTGCAGGTCCTGATGCACAGCAAGG 2748 Query 18634 AGG 18636 ||| Sbjct 2749 AGG 2751 >seq10062 Length=1426 Score = 315 bits (348), Expect = 3e-81 Identities = 639/934 (68%), Gaps = 31/934 (3%) Strand=Plus/Minus Query 30398 AGACCGAGCTGGAATCCGACGCCGGCGACACCATCTCGTTCGACCTCTCCGTCCACCTGC 30457 ||||||| |||||| || ||||||||||||||| | ||||| || ||||| ||| Sbjct 996 AGACCGACCTGGAACAGGAAGCCGGCGACACCATCAGCTATGACCTGTCGGTCCAGCTGG 937 Query 30458 GCGGCAAGCCGACCTACGGCGATAACCGCACGGAAGGCACGGAAGAAAACCTGCGCTTCT 30517 ||||| ||| || | | ||||| | | ||||||| || || || ||| ||||| Sbjct 936 GCGGCGAGCTGATCGAGGGCGACGCCAAGGCCGAAGGCAAGGGCGAGAAGCTGGACTTCT 877 Query 30518 ATACCGATCAGGTGAAGATCGACCAAGTGCGTCACCCGGTTTCGGC--CGGCGGTCGCAT 30575 || || |||| |||||||| | ||| | || || | || ||| || ||||| Sbjct 876 TCACGGACAAGGTCTTCATCGACCAGGCCCGTAAGCCCGT--CAGCTGCGGTGGCCGCAT 819 Query 30576 GTCGCGCAAGCGCACGATCCACAACATCCGCCGCATCGCTCGCGATCGCCTCGGCGACTA 30635 ||| ||||||||||| | ||| || | ||| ||| ||| | ||||| || || Sbjct 818 GTCCCGCAAGCGCACCGTGCACGACCTGCGCAAGGTCGGCCGCAACCGCCTGACGGAATA 759 Query 30636 CTTCTA-CAAGTTCACGGACGAGCTGCTGTTCATCTACCTGTCGGGCGCTCGCGGCATCA 30694 || | || ||| ||||| || | ||||| ||| | ||||| || ||||||| Sbjct 758 CTGGGCGCGCGTGTACG-ACGAGTTGTTCTTCATGTACGCCGCCGGCGCGCGTGGCATCA 700 Query 30695 ACCTGGACTTCGTGGAAACGCCGGACTTCAAGGGCTTCGCCGGCAACCCGCTGGAAGCCC 30754 ||| ||||||| ||| ||| | | |||| |||| |||| | | || || | Sbjct 699 ACCCGGACTTCAACTTCCCGCTGGATTACGCGGGCCGCGCCAACAACGCCTTCGAGGCGC 640 Query 30755 CGGACGTCGACCACCTGCTGTACGGCGGCGCCGCGACGAGCAAGCCGAGCCTGACCGCCA 30814 | || | ||| ||| | |||| ||||| || | || |||||| | | |||||| | Sbjct 639 CCGATGCCGAGCACATCCTGTTCGGCGACGGC---ACCAGCAAGGCCACGCTGACCAGCG 583 Query 30815 ACGACATCATGGACCCGATGGTGATCGAGAAGGCGGTCGAAAAGGCGTCGATG-ATGCAG 30873 | || ||| | | | |||||||| || | ||||| || | | | | Sbjct 582 CGGGCAAGATGTCGCGCACGCTGATCGAGCGCGCCAACACGAAGGCCGCGGCGCAGGGCG 523 Query 30874 GCCGAGAACCCGGAAGTC-GCCAACATGGTGCCGG---TCAGCATCGACGGCGACGACCA 30929 || | | || |||| | ||| | | ||| || ||| ||||| |||| ||| || Sbjct 522 GCGGCG--CCACGAAGACCGCCGA---GCTGCAGGGCATCACCATCGCCGGCAGCGAGCA 468 Query 30930 CTACGTCTGCGTCATGTCGGAGTATCAGGCGACCGACATGCGCACGGCGACGGGCG--GG 30987 || ||| ||| ||| || |||||| |||| ||||| |||||||| || Sbjct 467 CTTCGTGACCGTGATGCACCCGTTCCAGGCGCACGACCTGCGCGTCCAGACGGGCGAGGG 408 Query 30988 C-GCTGGATCGACTTCCAGAAGGCAGCGGCGGCGGCCGAAGGTCGGAACAACCCGATCTT 31046 | ||||| | ||| |||||||||| ||||| ||||| ||||||||| ||||||||||||| Sbjct 407 CAGCTGGCTGGACATCCAGAAGGCGGCGGCCGCGGCGGAAGGTCGGGACAACCCGATCTT 348 Query 31047 CAAGGGCGGCCTCGGCATGATCAACAACGTCGTGCTGCACAAGCACCGCAACGTGATCCG 31106 ||||| | ||| ||||||||| |||| | |||||||||||| ||| | || Sbjct 347 CAAGGACAACCTGGGCATGATCGGCAACACGATCCTGCACAAGCACAAGTCCGTCGTGCG 288 Query 31107 CTTCAACGATTACGGCGCGGGCGCCAACGTCGAGGCGGCGCGTGCGCTGTTCATGGGCCG 31166 |||||||| |||||||| |||| |||||| || ||||||||||||||| ||||||| Sbjct 287 GTTCAACGACTACGGCGCCGGCGGCAACGTGCCCGCCGCGCGTGCGCTGTTCCTGGGCCG 228 Query 31167 TCAGGCTGGCGTGATCGCCTACGGCACC---GCGAACGGCCTGCGCTTCGATTGGGAAGA 31223 |||||| || | |||| ||| || | | ||||||||||||||| ||| || Sbjct 227 TCAGGCCCTGGTCCTGGCCTTCGGTTCCGGTGGTAGCGGCCTGCGCTTCGACTGGTCCGA 168 Query 31224 AACGGT---GAAGGACTACGGGAACGAACCCGCCATCTGCGCAGGCTTCATCGCCGGCAT 31280 ||| | |||| |||| ||||| || |||||||| ||| |||| |||||| Sbjct 167 ---GGTCCCGCTGGACCACGGCAACGACATCGAGATCTGCGCTGGCGCCATCTTCGGCAT 111 Query 31281 GAAGAAGGCTCGTTTCAACAACAAGGACTTCGGC 31314 |||||| | || ||||||| ||||||||||||| Sbjct 110 CAAGAAGACGCGCTTCAACAGCAAGGACTTCGGC 77 >seq23830 Length=533 Score = 221 bits (244), Expect = 5e-53 Identities = 250/335 (75%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 9963 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 10022 ||||||||||||||||||||||||| |||||||||| ||||| |||||| || | || Sbjct 181 CATGGCATCCGTCAACAAAGTCATCATCGTCGGCAACCTCGGGCGCGACCCCGAGATGCG 240 Query 10023 CTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAA 10082 | | |||| ||||||||| || ||||| || | |||| || ||||| |||| Sbjct 241 CACCTTCCCCAGCGGCGACCAGGTCGCCAACGTCACCATCGCCACCACCGACCGCTGGCG 300 Query 10083 GGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGG 10142 |||||| | |||||||| |||||| | ||||| ||||||||| || ||| ||| Sbjct 301 CGACAAGAACACCGGCGAGAACAAGGAAGCCACCGAGTGGCACCGCATCGTGTTCAACGG 360 Query 10143 CCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGG 10202 ||| || ||||||||||| | | ||||||||||||||||| | | |||||| | || || Sbjct 361 CCGTCTGGCCGAGATCGTGGGCCAGTACCTGCGCAAGGGCTCCCAGGTCTATGTGGAAGG 420 Query 10203 CCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGAT 10262 | || | ||||| || |||||| || | |||||||||| | ||| || || || Sbjct 421 CAGCCTGCGCACCCGCAAGTGGACCGACCAGTCCGGCCAGGAAAAATTCACCACGGAAAT 480 Query 10263 CGTCGCCGAGAAGATGCAGATGCTCGGCGACCGCC 10297 | |||||| | ||||||||||| ||| ||||| Sbjct 481 CCGCGCCGACACCATGCAGATGCTGGGCAGCCGCC 515 >seq23194 Length=554 Score = 185 bits (204), Expect = 3e-42 Identities = 267/368 (73%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 9935 CGGCGGGCTTAACCTTCAAGGAGCTCGACATGGCATCCG---TCAACAAAGTCATCCTCG 9991 |||||||| | ||| | ||| |||| ||||| || |||||||||||||||| | Sbjct 363 CGGCGGGCATC-CCTGAACGGATATCGATATGGCCCGCGGCATCAACAAAGTCATCCTGG 305 Query 9992 TCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCGAGCGGCGACGCAATCTCCA 10051 ||||||| |||||| |||||| |||||||| || | | ||||| || ||| || Sbjct 304 TCGGCAACCTCGGCAACGACCCAGAAACCCGTTATACGCAGGGCGGCATGGCGATCACCC 245 Query 10052 ACATCCGCCTCGCTACGACCGATCGCTAC--AAGGACAAGGCGAGCGGCGAGATGAAGGA 10109 ||| |||| || || ||| | || | | |||||||||| |||| | | |||| Sbjct 244 GGATCAGCCTGGCCACCACC-AGCG-TGCGGAAGGACAAGGA---CGGCAACCAGCAGGA 190 Query 10110 ATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGTA 10169 | ||||||||||||||||| ||||||||| |||| |||||||| || |||||| Sbjct 189 ACGCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGCGAGATCGCCGGCGAGTA 130 Query 10170 CCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGC-ACGCGGAAGTGGCAGG 10228 ||||||||||||| |||| ||| |||||||| ||||||| ||| |||| | Sbjct 129 CCTGCGCAAGGGCAGCTCGGTGTACGTCGAGGGCTCCATCCGCTACG-ACAAGTACACCG 71 Query 10229 ATAACGCCGGCCAGGATCGCTACACGACCGAGATCGTCGCCGAGAAGATGCAGATGCTCG 10288 | | ||| ||||| ||| | ||||| ||| ||||||| ||||||||||||||| Sbjct 70 GCCAGGACGGTCAGGAGAAGTACTCCACCGACATCATCGCCGACGAGATGCAGATGCTCG 11 Query 10289 GCGACCGC 10296 ||| |||| Sbjct 10 GCGGCCGC 3 >seq6074 Length=2299 Score = 156 bits (172), Expect = 2e-33 Identities = 237/334 (71%), Gaps = 25/334 (7%) Strand=Plus/Plus Query 9974 TCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCGA 10033 |||||||||||||||| ||||||||||||||| ||||||||| ||| || | Sbjct 1912 TCAACAAAGTCATCCTGGTCGGCAATCTCGGCAACGACCCGGACGTGAAGTACACCCAGG 1971 Query 10034 GCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCG-CTACAAGGACAAGGCG 10092 ||||| || ||| || |||| |||| || || ||| | || | ||||||||||| Sbjct 1972 GCGGCATGGCGATCACCCGCATCAGCCTGGCCACCACC-AGCGTCCGCAAGGACAAGGAT 2030 Query 10093 AGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGCC 10152 || | || |||| ||||||||||||||||| ||||||||| |||| | Sbjct 2031 GGCAACCAGC---AGGAGCGCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGC 2087 Query 10153 GAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCATCCGC 10212 ||||||| || ||||||||||||||||||| |||||||| |||| ||| || | ||| Sbjct 2088 GAGATCGCCGGCGAGTACCTGCGCAAGGGCAGCTCGGTCTACGTCGAAGGCAGCCTGCGC 2147 Query 10213 -ACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGC---------TACACGACCGAGAT 10262 ||| |||| || |||||||||| || ||| | ||||| || Sbjct 2148 TACG-ACAAGT---------ACACCGGCCAGGACGGCGTGGAGAAGTACTCCACCGACAT 2197 Query 10263 CGTCGCCGAGAAGATGCAGATGCTCGGCGACCGC 10296 | ||||||| | ||||||||||| |||| |||| Sbjct 2198 CATCGCCGATGAAATGCAGATGCTGGGCGGCCGC 2231 >seq1840 Length=6135 Score = 123 bits (136), Expect = 1e-23 Identities = 244/354 (69%), Gaps = 13/354 (4%) Strand=Plus/Plus Query 60945 CGAGGATGGCACGCCCGTGAAGATGGGCGACACCATCAC-CCGCCA-GCGCGCCGCAGAA 61002 ||||||||||||||| |||| | |||||||| || ||| ||| || |||||| ||| Sbjct 417 CGAGGATGGCACGCCGGTGAGGCTGGGCGACCGCACCACGCCGGCACGCGCGCTGCA--- 473 Query 61003 CTGGCGCGCAATCTCAT--GGCAAAGGACGAGCGCGATTTGCGCGCGTCGCTTCCGCCCG 61060 || || ||| ||||| ||| | ||| || | || || ||||||||||| ||||| Sbjct 474 -TGCCGTGCAGGCTCATCTGGCCAGGGAGGAAGGGGAGTTCCGCGCGTCGCT---GCCCG 529 Query 61061 ACACGCGGCTCTATCAGGCCGAATACGACGTGTACCTGGATTTTGTCGGCCAGTACGGCA 61120 | |||| |||| ||| |||||||| || | ||||| || ||||||||||| Sbjct 530 GTGTGGCGCTCAGCCAGGGCGAGTACGACGTCTATGTCGATTTCCTCTACCAGTACGGCA 589 Query 61121 TCGGCAATTGGCGCAAGTCGAGCATGCGGCGTTACGTGATCGCCGGCGAGTATGCGGCGG 61180 ||||||| |||||| |||| ||||| || | || | || |||||| || Sbjct 590 TCGGCAACTGGCGCGCGTCGTCGATGCGCCGGCATCTGCTGCAGGGTGAGTATCACCAGG 649 Query 61181 CGTGTAAAGCGCTGCTGAACTACCGTTTTGCCGCCGGCTACGATTGCAGCACGCTCGTCG 61240 | || | || ||||| | | || | |||||||| || || | | ||| Sbjct 650 CCTGCGATGCCTTGCTGCTGTGGAGGCGGGCAGGGGGCTACGACTGTTCAACCCGCATCG 709 Query 61241 ACGGCAAGCCGAACAAGCGT-TGCTGGGGCGTGTGGACGCGGCAGCAGCAGCGC 61293 ||||| || ||| | ||| |||||||| |||||| ||| |||||||||||| Sbjct 710 ACGGCCGCCCCAAC-ACCGTGTGCTGGGGAGTGTGGGAGCGCCAGCAGCAGCGC 762 >seq14555 Length=974 Score = 114 bits (126), Expect = 5e-21 Identities = 248/359 (69%), Gaps = 23/359 (6%) Strand=Plus/Plus Query 60945 CGAGGATGGCACGCCCGTGAAGATGGGCGACACCATCAC-CCGCCA-GCGCGCCGCAGAA 61002 ||||||||||||||| ||||||||||||||| || ||| ||| | |||||| ||| Sbjct 216 CGAGGATGGCACGCCGGTGAAGATGGGCGACCGCACCACGCCGGTACGCGCGCTGCA--- 272 Query 61003 CTGGCGCGCAATCTCAT--GGCAAAGGACGAGCGCGATTTGCGCGCGTCGCTTCCGCCCG 61060 || || || | ||| ||| | ||| || | | || ||||||||||| ||||| Sbjct 273 -TGTCGTACAGGCCCATCTGGCCAGGGAAGAAGGACAGTTTCGCGCGTCGCT---GCCCG 328 Query 61061 ACACGCGGCTCTATCAGGCCGAATACGACGTGTACCTGGATTTTGTCGGCCAGTACGGCA 61120 | | |||| |||| ||| |||||||| || | ||||| || ||||||||||| Sbjct 329 GCGTGGCGCTCAGCCAGGGCGAGTACGACGTCTATGTCGATTTCCTCTACCAGTACGGCA 388 Query 61121 TCGGCAATTGGCGCAAGTCGAGCATGCGGCGTTACGTGATCGCCGGCGAGTATGCGGC-- 61178 ||||||| |||||| ||| ||||| || | || | || || | | || | || Sbjct 389 TCGGCAACTGGCGCGCGTCATCGATGCGCCGGCATCTGCT-GCAGG-GTGAATACCGCCA 446 Query 61179 GGCGTGTAAAGC---GCTGCTGAACTACCGTTTTGCCGCCGGCTACGATTGCAGCACGCT 61235 ||| ||| | || ||||||| | || || | |||||||| || || | Sbjct 447 GGCCTGTGATGCCTTGCTGCTGTGGAAGCG---GGCAGGGGGCTACGACTGTTCGACCCG 503 Query 61236 CGTCGACGGCAAGCCGAACAAGCGT-TGCTGGGGCGTGTGGACGCGGCAGCAGCAGCGC 61293 ||||| ||| || ||| | ||| ||||||||||||||| ||| ||||| |||||| Sbjct 504 TGTCGATGGCCGCCCCAAC-ACCGTGTGCTGGGGCGTGTGGGAGCGCCAGCAACAGCGC 561 >seq17070 Length=816 Score = 95.1 bits (104), Expect = 5e-15 Identities = 172/251 (69%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 27778 ACGACATCACGCGCACGAAAGCCGACTTCATCATCGATGAAGCCGAGTGGCGCGCGACCA 27837 |||||||||| |||| | ||||| |||||| | || | || | |||| | ||| Sbjct 585 ACGACATCACCCGCAACCAGGCCGATTTCATCGTGGACCAGCAGGATTTCCGCGAGTCCA 526 Query 27838 TGCGTCAGGCGGCCGTCGCCGAGCTGTTGGAGCTGATCGGCAAGATGCCGCCGCAGATCG 27897 |||| |||||||||| | || | || ||| || | |||||| | |||||| | |||| Sbjct 525 TGCGCCAGGCGGCCGCGGAGCAGTTCTTCGAGATGCTGGGCAAGCTCCCGCCGGATATCG 466 Query 27898 CGATCGCCATGCTCGACCTGCTGGTCGAAAACATGGACATCCCGAACCGCGACGAGCTCG 27957 || | | |||| |||||| |||| | | ||||| |||| | || ||| ||| Sbjct 465 CGCTGAACCTGCTGGACCTGGCCATCGACATGACCGACATGCCGATCAAGGAAGAGGTCG 406 Query 27958 TGAAGCGCATCCGCGCGATCAACGGCCAGAAAGACCCGGACCAGGACGAACCGACGCCCG 28017 | ||||||||| | |||||||||||| ||| | | ||||| || | |||| | Sbjct 405 TCGCACGCATCCGCAAGCTCAACGGCCAGACCGACACCGGTCAGGAAGA---GTCGCCGG 349 Query 28018 AGGAAATCCAG 28028 || | || ||| Sbjct 348 AGCAGATGCAG 338 >seq19829 Length=683 Score = 91.5 bits (100), Expect = 6e-14 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321 |||| |||||||||||||| |||||| || | | ||||| || ||||| ||| || ||| Sbjct 591 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 650 Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCA 8351 ||||| ||||||||| |||| |||||||| Sbjct 651 TCGTGGGTTCGAATCCCACCCTCTCCGCCA 680 >seq10753 Length=1336 Score = 87.8 bits (96), Expect = 7e-13 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 8254 ACGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTG 8313 ||| ||||||| ||||||||||| ||| ||||||| ||| |||||| ||| | ||| Sbjct 579 ACGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTG 638 Query 8314 CGAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCA 8351 ||| ||||||||||||||||||||| ||||||| Sbjct 639 TGAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 676 >seq7046 Length=2020 Score = 87.8 bits (96), Expect = 7e-13 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 8254 ACGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTG 8313 ||| ||||||| ||||||||||| ||| ||||||| ||| |||||| ||| | ||| Sbjct 665 ACGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTG 724 Query 8314 CGAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTTTA 8359 ||| ||||||||||||||||||||| ||||||| || ||| Sbjct 725 TGAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCAAATTCTTA 770 >seq1293 Length=7953 Score = 86.0 bits (94), Expect = 2e-12 Identities = 143/197 (73%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 60943 TACGAGGATGGCACGCCCGTGAAGATGGGCGAC--ACC-ATCACCCGCCAGCGCGCCGCA 60999 |||||||| |||||||||||| || || ||| ||| ||||||||| ||||||| || Sbjct 110 TACGAGGACGGCACGCCCGTGCAGCTGTCGGACCCACCGATCACCCGCGAGCGCGC-GCT 168 Query 61000 GAA-CTGGCGCGCAATCTCATGGCAAAGGACGAGCGCGATTTGCGCGCGTC-GCTTCCGC 61057 | | |||| ||||| | || | ||||||||| || || | | || | | || | || Sbjct 169 GCAGCTGGTGCGCAGCCACACCTCCAAGGACGAG-GCCATGTTC-CGAGCCAGCCT--GC 224 Query 61058 CCGACACGCGGCTCTATCAGGCCGAATACGACGTGTACCTGGATTTTGTCGGCCAGTACG 61117 | | | | || || ||||| ||||||||| | |||||||| || | |||||||| Sbjct 225 CGGGCGTGGCCCTGTACCAGGCGGAATACGACCTCTACCTGGACTTCACCTACCAGTACG 284 Query 61118 GCATCGGCAATTGGCGC 61134 |||||||| |||||| Sbjct 285 GCATCGGCGCCTGGCGC 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197705328058062