Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq10753 84.2 2e-11 seq7046 84.2 2e-11 >seq10753 Length=1336 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 6764 CATGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGG--GTAAAA 6821 |||||| | |||||||| || ||| |||| ||||||||||||||| ||||| || | Sbjct 584 CATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGT 643 Query 6822 CCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 ||||||||||||| |||||||| | ||| ||| Sbjct 644 CCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 676 >seq7046 Length=2020 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 6764 CATGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGG--GTAAAA 6821 |||||| | |||||||| || ||| |||| ||||||||||||||| ||||| || | Sbjct 670 CATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGT 729 Query 6822 CCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 ||||||||||||| |||||||| | ||| ||| Sbjct 730 CCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492331590641680