Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019419.2 Length=43457 Score E Sequences producing significant alignments: (Bits) Value seq7306 82.4 2e-11 >seq7306 Length=1951 Score = 82.4 bits (90), Expect = 2e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 31412 CCACCGCCTGCGCCAGACGCGGCAACGCCCAGTTTCCCGTCCGGCCCGCGCTTCAGTGGC 31471 |||||||| |||| |||||| || || || |||||||||||||||| ||| ||| Sbjct 1919 CCACCGCCACCGCCGTGCGCGGCCACACCGAGACGACCGTCCGGCCCGCGCTGCAGCGGC 1860 Query 31472 ATGATGGCCTCGGGTCCAGCCTCACCCATCAACCCAGCGCCCTTAGCGAACGC 31524 ||||| || || ||||| || || || | | ||||||||||| ||||| || Sbjct 1859 ATGATCGCTTCCGGTCCCGCTTCGCCGAATACGCCAGCGCCCTTGGCGAAGGC 1807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138882163422042