Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq24300 399 5e-107 seq1131 253 4e-63 seq8333 165 2e-36 seq6580 80.6 6e-11 >seq24300 Length=517 Score = 399 bits (442), Expect = 5e-107 Identities = 356/446 (80%), Gaps = 0/446 (0%) Strand=Plus/Minus Query 8423 ATAGGAGGAAAGATGCAGGACTATTTTTTGGAGTCTTTGAAGCTCCAGCGCATTGAtttt 8482 |||||||| || |||||||||||| |||||||||| ||||| |||||||| |||||||| Sbjct 466 ATAGGAGGGAAAATGCAGGACTATCTTTTGGAGTCGTTGAAACTCCAGCGTATTGATTTC 407 Query 8483 tttCTTAAGCTTGTAGCAGCTAGTGAGTGTAGTGATGAAGAGAAGGGGCTGGCCCTGCAG 8542 ||| | ||||||||||| |||||||||||||| || |||||||| | || || | ||| Sbjct 406 TTTATCAAGCTTGTAGCGGCTAGTGAGTGTAGCGAAGAAGAGAAACGCCTTGCGATCCAG 347 Query 8543 TGGGTTTCTGAACTGACAGATGAACTCATGGCAAAAATCAGAACCCACGAATACAACCGC 8602 ||||| || |||||||| || || || ||||| ||||| | | ||| || ||| || Sbjct 346 TGGGTGTCGGAACTGACGGACGAGCTGATGGCGAAAATTCGTAACCATGATTACGGCCAG 287 Query 8603 TCAATGGATGTCATCAATTGAGGTGACTTTTATGCGCATTGAAATAATGATCGATAAAGA 8662 ||||||| || ||||||| | | | |||||||||||||||||||||||||||||||| Sbjct 286 GCAATGGACGTTATCAATTAAAGGGGGCTTTATGCGCATTGAAATAATGATCGATAAAGA 227 Query 8663 GCAGAAGATTAGCCAGTCTACTCTGGACGCCCTTGAATCCGAGCTTTACCGCAATCTGCG 8722 ||||||||| |||||| | || ||||| ||||||||||||||||||||||| ||| |||| Sbjct 226 GCAGAAGATAAGCCAGGCAACACTGGAAGCCCTTGAATCCGAGCTTTACCGAAATTTGCG 167 Query 8723 CCCCCTGTATCCCAAAACGGTAATTCGTATCCGCAAAGGTAGCTCTAACGGTGTGGAACT 8782 ||| || ||||| || |||| ||| || || || || || ||| ||||||| |||| || Sbjct 166 CCCTCTTTATCCAAACACGGCAATCCGCATACGTAAGGGAAGCGCTAACGGCCTGGAGCT 107 Query 8783 GACCGGATTGCAACTGGATGAAGAAAGAAAACAAGTGATGAAAATTATGCAGAAGGTGTG 8842 || ||| || ||||||| ||||| | ||| | || || | ||| ||||| |||| || Sbjct 106 GAGCGGCTTAAAACTGGACGAAGATAAAAAGCGGGTATTGGAGATTTTGCAGCAGGTCTG 47 Query 8843 GGAAGACGACAGCTGGCTACATTGAT 8868 ||| ||||| ||||| ||||||| Sbjct 46 GGAGAGTGACAGTTGGCTGCATTGAT 21 >seq1131 Length=8710 Score = 253 bits (280), Expect = 4e-63 Identities = 964/1489 (65%), Gaps = 52/1489 (3%) Strand=Plus/Plus Query 12844 GCATGCATCGTTGCCCAGGCCAAATCTGCGTGGCTGGCCTCTTCGCTGCGGCTGGCTTCA 12903 |||||||| |||||||||| ||| ||||||| |||||| |||||||||| || Sbjct 3895 GCATGCATGCACGCCCAGGCCAGATCCGCGTGGCCGGCCTCATCGCTGCGGCCCGCGGTG 3954 Query 12904 TAGGTTGGACGGTTGCCGCTGGCGGTGGTGGC-GCG----GCGGATAGCCATAAAGGACT 12958 ||||| || ||||||||| | || | | || |||||| |||||||| | | Sbjct 3955 TAGGT--GATC--TGCCGCTGG-GATGCCGTCAGCACCTTGCGGATGGCCATAAACGCCG 4009 Query 12959 GCGCAATGTCGGTGTGCCCAGCGTCAAACTCCAGACGGCGGTGGCTGATAATGTCGTACG 13018 || | || ||| ||| ||| | ||| | |||| | || ||| | | | | Sbjct 4010 CTGCCACATCCGTGCACCCGCTGTCCATCTCAAAGCGGCCCTTGCCGATCACCTGCTTGG 4069 Query 13019 CCTTGAGCACCAGGGCATTTTTGACGTTAGGGTTGTAGACAAACTCCCGCACGGCAGGAA 13078 |||| ||||||||| | || || | | |||| | ||||| | |||| Sbjct 4070 CCTTCAGCACCAGGCGGCTCTTCACCTCCACGCTGTACTGGTAGGCCCGCGCCTGCGGAA 4129 Query 13079 AGAACGCTTTTACGTTCTCATAAACACCGTGCCCGACGCCGGTCGAGTCGATGCCGATAT 13138 ||||| | ||||||| ||| || || ||||| | ||| | | |||||||||||| | Sbjct 4130 AGAACTTGATGACGTTCTGATAGACGCCCTGCCCCAGCCCGCTGGTGTCGATGCCGATGT 4189 Query 13139 AGGTCACGTTGTACTGCTGCGTCAGTTTTTTGATAGCATCAGCCTGG-GCGCGAAAGTCC 13197 ||||||||||| ||| |||||| | ||| || || ||||| || |||| |||| Sbjct 4190 AGGTCACGTTGAACTTCTGCGTGATCGCGCGGATGGCCTCTGCCTGCTGCTCGAA-GTCC 4248 Query 13198 ATCCCGCGCCACTGATGACGCTCCAGAATTCGGAACTTCCCGCCAGGTACAGTTGGCGGT 13257 ||| |||| || || | ||| | |||||||| ||||| || | |||||| Sbjct 4249 GCCCCCTTGAACTGCTGCCGGTGCAGCAGCCGGAACTTGCCGCCCGGCGCCCGCGGCGGT 4308 Query 13258 GCCATAACCACGCAGC-CTGCGCTGTCACCGTTCTGCGTACCTTTTGCCGGGTCATAACC 13316 || || ||||| |||| | || || ||| | |||| ||||| || || Sbjct 4309 GCAATCACCAC-CAGCGCCGCAGCATCGCCGGTGTGCGAT---------GGGTCGTACCC 4358 Query 13317 GATCCACACTTCGCGCCAGC---CAAACGGGCGCAGCGCCAGCGCCTGAAAATCGGTCCA 13373 | |||||| || | || | |||| ||| || | || || |||| | ||| Sbjct 4359 CACCCACAC--CG-GAAAGTGCGCGTACGGCCGCGTGGCAAACGGCTTGCAATCCGCCCA 4415 Query 13374 GACTTCCCAGCTGTCCACCATGCACGCCTGCAGCTCGCTGAGCGGGAACACGGACGCGAG 13433 | |||||||||||||||||||| |||||| || |||||| ||||| | ||| Sbjct 4416 CGCCTCCCAGCTGTCCACCATGCAGCCCTGCATTTCCTTGAGCGTGAACAGGCTAGCGCT 4475 Query 13434 ATCGTCCACGAACTCACACATCAGCAGGTTCTGGTATTCGTCCGGGCTGTACTCCATGCG 13493 ||||| | |||||| ||||| |||||| | | || ||||||||| || || Sbjct 4476 GTCGTCGATGAACTCGCACATGTACAGGTTGGCGAACTCTTCCGGGCTGCTTTCTTCCCG 4535 Query 13494 CAGCTGGTCGAGGTCGAACAGGTTACAGCCGCCGCGCACCGCATCCTCCACGGTGACGAT 13553 ||||| ||||| |||||||||||| ||||| ||| |||| ||||| | || || | Sbjct 4536 CAGCTCGTCGATGTCGAACAGGTTGCAGCCCAGGCGTGCCGCGTCCTCGATCGTCACCAC 4595 Query 13554 CTGGCGGTACTGCCCGTCAGGGCAGAGCAGGCCGC-GCGCAAGGTTGCTGTGGGTCAGGT 13612 | ||| ||| | || | | | | | ||||| ||||| | ||| |||| ||| || Sbjct 4596 GTCGCGCCACTTGCGATCGGCCCCGCGGATGCCGCCGCGCAGCGCTGC-GTGGCTCACGT 4654 Query 13613 TAATATCCA---CCTTGTCCGCTTTGGCACGGCCCCGGTTAAACAGCGCACCGGACCAGA 13669 || | ||| | || ||| ||||| ||| | || ||| ||||| Sbjct 4655 CGATGGTGATGGCCTCGCCC---TTGCTGCGGCCTTTGTTGCGCTCCGTGCCGTTCCAGA 4711 Query 13670 ACGGATAAGCACTGTGGGTCAGGCTGGAGGGCGTGGAAAAATAGGTTTGTCGCCATTTTT 13729 ||||||| || || | || | || || ||||| || || || | ||||| | | Sbjct 4712 ACGGATACGCCTCATGCGACATGGCCGACGGGGTGGAGAAGTACGTCTTGCGCCAATGCT 4771 Query 13730 TGTGAATGGCCATACCGGAAGCCACTTTGCGCAGTTCCTGGAATTTTGGTATCCAGAAAT 13789 |||| | ||||| | | ||||| ||| || | | || | | ||| || Sbjct 4772 TGTGCGTCGCCATGGCCGCGGCCACCTTGTTGAGCTGGCGAAAGCCCGACACCCAAAAGA 4831 Query 13790 ATTCATCCAGGTACAGATTACCGTGATAGCTCTGCGCCGTGCGGGCGTTGGTGCCGAGAA 13849 | ||||| | ||| | | ||| | ||||||||| || |||||||| | || Sbjct 4832 ACTCATCGAAGTAGAAGTCGCCGCTGCGCCCCTGCGCCGTCTTCGCATTGGTGCCCAAAA 4891 Query 13850 AGTACAAAGCGGCCCCATTGGGTAACACCATGGGATCGCCTTTCAGCTCAACATCCACCT 13909 ||| || | || || || | | ||| || || ||||| ||||||| || ||||| Sbjct 4892 AGTGCAGCTCCGCACCGTTCGACAGCACGATAGGGTCGCCGCTCAGCTCCACGCCCACCA 4951 Query 13910 CTTTTGCAAAGTCGATGATGTACTGCTTAAAGACGTGCGCCTGTGCCTTACTGGCAGAAA 13969 |||||| | | |||||| ||| || ||||||||| ||||| ||||||| Sbjct 4952 GCCCGGCAAAGGCCAGCATGTACGTCTTGAACTGGTGCGCCTGCGCCTTTGATGCAGAAA 5011 Query 13970 GGAAAATCTGGTTGCGTCCGGTCAGCAGGGCGTCAATCAATGCTTCACGGGCAAAATAAA 14029 |||||||||| ||||| || | | |||| |||| || || |||||||| || Sbjct 5012 GGAAAATCTGATTGCGCCCCTCCGTGATGGCGCGTATCAGCGCCTCGCGGGCAAAGTACC 5071 Query 14030 ACGTGGCGCCAATCTGGCGCGACTTGAGCAGGTTGCGGATGCGGTTTGTTTTCCCGGCTT 14089 | ||||| || ||||| |||||||| ||||| || |||| | || | | || | Sbjct 5072 AAGTGGCCCCGATCTGCCGCGACTTCAGCAGCAGCCGCGTGCGCTCCGTCTGC---GCCT 5128 Query 14090 CAAACCAGTGACGCTG-ATAGTCGAACATAGAGGCGTGGAAGACTTCTTCCAGCTTTTCG 14148 | |||| | ||| | ||| | || | ||||||||| || |||||| ||| Sbjct 5129 CCCACCACT-TCGCGGCATACCCAAAGTTCTGCTCGTGGAAGATCTCCAGCAGCTTCTCG 5187 Query 14149 ATCTGTTCATCAGTGAAAACATTCTTTTCCGGCTGACGGCGTGGGC-CTTTGTTGCGGTT 14207 ||||| || || ||||| || | |||| | || ||||| | |||||| Sbjct 5188 ATCTGCTCTTCGGTGAAGTGGTTGCGCTTCGGC-GTGCGCTTGGGCGCCGCGTTGCGCGC 5246 Query 14208 GGCGACGTTAGGGTTTAAGTCGGCTTCGTTGCCACCATTGTTAAACTTGCCGATCCGCGC 14267 ||| | ||| ||||| |||||| |||| ||| || || | | | || ||| ||| Sbjct 5247 GGCAATGTTGGGGTTCAAGTCGCCTTCCTTG---CCCGTGCTCTGGTAG-CGCTCCACGC 5302 Query 14268 GTG----GCGCTCCGACTGGCGCGCCAGCAGGTCAATTTCTTTGAAATC 14312 | | ||||||| ||| || |||||||||| || || ||||| || Sbjct 5303 GCGCCGTGCGCTCCAGCTGCCGGCCCAGCAGGTCGATCTCCTTGAAGTC 5351 Score = 141 bits (156), Expect = 2e-29 Identities = 462/705 (66%), Gaps = 36/705 (5%) Strand=Plus/Plus Query 15842 TGCGAACAGACCAACTTTGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCCAAG 15901 |||| ||||||||||| || ||| | | |||||| || ||| ||||| | Sbjct 7075 TGCGTGCAGACCAACTTCGACACGCAGTTCACCTACCGCCTGCTCGACGCCTGGGCGCAC 7134 Query 15902 TTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCGTCAAGCGTCAGGCGCTGGACCGC 15961 || ||||||||| ||| |||||| |||| ||| ||||||| |||||||| |||||| Sbjct 7135 CGCCCCGACTTCCAGACGCGCATCCGCGACGCGATCATCAAGCGCCAGGCGCTCGACCGC 7194 Query 15962 ATCATGATCGGCTTTAACGGCG--TGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAACC 16019 || | |||||||| ||||||| | | || ||| | | | || | || | ||| Sbjct 7195 ATGACCATCGGCTTCAACGGCGTCTCCATCGAGCCCGA--CACCAACCTCGCCGCCCACC 7252 Query 16020 CGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATC 16079 | |||||||| ||||| || || |||||| | ||||| |||||| | || | | | Sbjct 7253 CCCTGCTGCAAGACGTGAACAAGGGCTGGCTGCAGAAGTACCGCGACAAGGCCGCCGCCC 7312 Query 16080 ATGTTATGGGCAGCACCACAAAAGACGGTGCAACGACTGCAGGCGCGGTCAAAGTGGGCA 16139 || |||||| | |||| || | || | || | || || | | || Sbjct 7313 GCGTCATGGGCTCC---------GACGCCGCCAAGA-TCAAG--GTGGGCAGCGACGCCA 7360 Query 16140 AGGGCGGCGACTATGCCAACCTGGACGCCGTGGTGATGGATGCCGTCAACGAGCTGATCG 16199 ||| ||| || ||||| ||||| | | || | | | || ||||| ||| Sbjct 7361 ---GCGCCGAGTACAAGAACCTCGACGC---GCTCGTGTACGACAGCATTCAGCTGCTCG 7414 Query 16200 ACGCGGTTTATCAGGATGATGACGATCTGGTTGTTGTCTGCGGACGTGAACTGCTGTCTG 16259 || || || || | || ||| || || | || ||| || | || || || Sbjct 7415 ACCCGTGGTACCACGGCGACCCCGACCTCGTCGCCATCCTCGGCCGCGGGCTCATGCATG 7474 Query 16260 ACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAGAAAATTGCCGCCGATC 16319 |||||| ||||||||||||||| |||||||| | || ||| | | ||| |||||| Sbjct 7475 ACAAGTTCTTCCCGCTGGTCAACCAAGAGCAGCCCGCCACCGAAACGCTCGCCACCGATC 7534 Query 16320 TGATCATCAGCCAGAAACGTATGGGCGGCCTGCAGGCCGT--GCGTGCGCCTTATTTCCC 16377 || ||||| || || || | |||||||||| ||||| ||||| |||| || ||| Sbjct 7535 TGGTCATCTCGCAAAAGCGCGTAGGCGGCCTGCGCGCCGTCACCGTGC-CCTTCTTCCCC 7593 Query 16378 GGCAAATGC--CCTGCTGATCACCCGTCTGGATAACCTGTCCATCTACTGGCAGGAAGAT 16435 | || || |||| ||||| ||| ||||||||||||||||||||| | Sbjct 7594 G---AAGGCAAGGTGCTCGTCACCACGCTGTCCAACCTGTCCATCTACTGGCAGATCGCC 7650 Query 16436 ACCCGCCGCCGTTCTGTTATCGAC-AACCCGAAACGT-GACCGGATTGAAAACTTTGAGT 16493 | |||||||| || | ||| |||| | || || | | | ||||| |||| Sbjct 7651 GCGCGCCGCCGCCACGTGAAGGACGCGCCCG--AGGTCGATGCGGTGCAGAACTTCGAGT 7708 Query 16494 CCGTCAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCGC 16538 | |||||| | || |||||||| |||||| || |||||||| Sbjct 7709 CGTCCAACGACGACTACGTGGTCGAAGACTACGGC--CGCGGCGC 7751 Score = 116 bits (128), Expect = 8e-22 Identities = 237/350 (68%), Gaps = 4/350 (1%) Strand=Plus/Plus Query 11915 GGCGGAACGCGGTGTGCTGCCATCATGTCATCGCGGCTCACGTTCTTGATGTTCAAAAAC 11974 ||||| |||||||| || |||| || ||| | ||| |||||||||| || Sbjct 2963 GGCGGCACGCGGTGGGCGGCCAGCACGTCGGCCATGCTGGTGTTCTTGATGGCGGCGAAG 3022 Query 11975 TCATCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTGGATACCGTCCTTTTTACCGTTG 12034 || || || || || | ||| | || || | | | |||||| || ||| Sbjct 3023 TCGTCTTTGGCGGCGATCTCGCTGATGGGGATCAGCTTCAAGCCGTCCGCCTTGCCGCCA 3082 Query 12035 GGCGAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCCTTTGGCGCTTTTCATTGCCTGG 12094 |||| || || |||||||||||||||||||||||||| |||| | || || | Sbjct 3083 GGCGCGTGCAGGAACAGGTTGCGGAAGTTGCCCGGCCCCTTGGACTTGCGCAGCTGCTCG 3142 Query 12095 CGGATGTTGTTCACGTCCTCCTGGTTCTG--CGCGGCGTCAGTCATGTACATGATGAAGC 12152 || | ||| |||||| |||| || || |||||| ||| |||||||||||||| Sbjct 3143 CGCAGCGTGTCCACGTCGG--TGGTGCTCACCGTGGCGTCGCTCAGGTACATGATGAAGC 3200 Query 12153 CTGCGTGGCTACCGTTAATGTAGTACTTCCGGCGGAACAGTGTTGCGGACTCATTCAGCA 12212 | || ||||| ||||| ||||||| ||||| |||| || |||| ||| ||||| Sbjct 3201 CGGCATGGCTGCCGTTCTCGTAGTACCGGCGGCGAAACATGGTGGCGGCCTCGTTCAGGT 3260 Query 12213 GGGCGGAAGGGATAGCTGACAGATATTCCGGCAGACCGTAAATCTCCTGG 12262 |||| || | | || ||| || ||||||| || || | ||||||| Sbjct 3261 GGGCCGACTGCAACGCGCTCAGGTACTCCGGCACGCCATACACCTCCTGG 3310 Score = 91.5 bits (100), Expect = 3e-14 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 14983 GGCCAGAAGCTTTTCACCTCCATGGAGGTCAGCACGAAGTTTGCCGACACCGGCAAAGCC 15042 ||||||||||| | ||||||||| ||| ||| | | | || |||||||||||| | || Sbjct 6164 GGCCAGAAGCTCTACACCTCCATCGAGATCAACCCCGAATTCGCCGACACCGGCGAGGCG 6223 Query 15043 TACCTTGTGGGGCTGGGTGCGACGGACGATCCTGCGAGCCTTGGCACCGAAATGCTGGCT 15102 ||||| ||||| |||| | || ||| | || || ||||| |||||||| ||||| Sbjct 6224 TACCTCGTGGGCCTGGCCGTCACCGACAACCCCGCCAGCCTGGGCACCGAGGCGCTGGAG 6283 Query 15103 TTCAGCGCCA 15112 ||| ||||| Sbjct 6284 TTCGCCGCCA 6293 >seq8333 Length=1724 Score = 165 bits (182), Expect = 2e-36 Identities = 526/805 (65%), Gaps = 42/805 (5%) Strand=Plus/Minus Query 27226 GTTCCCCCTCAATAAGCCGGTCCTGCTGACTGATGTGCTCACCGCCAGCGGTAAAGCGGG 27285 |||||| || || ||||| |||||||| | | | ||||| ||| || || || Sbjct 1670 GTTCCCGCTGAACGTACCGGTGCTGCTGACCAACCCGGCCGGCGCCATCGGCAAGGCCGG 1611 Query 27286 GGAGTCCGGCACGCTGGCCCGCTCGCTGGACGCGATTGCAGATCAGGCAAAACC----CG 27341 | | ||||||||| ||| || |||||||||| || ||| || |||| || | Sbjct 1610 CGCGGGCGGCACGCTCGCCGGCGCGCTGGACGCCAT--CAG--CAAGCAAGCCCGCGCCA 1555 Query 27342 TGACTGTCGTTGTGCGTGTGGCGCAGGGCGAAACCGAAGCGGAAACCACCTCCAATATTA 27401 | || || || ||||| ||||| | ||| |||| ||||||||| | |||| | | Sbjct 1554 TCACGGTGGTGGTGCGCGTGGCCGAAGGCACCACCGCCGCGGAAACCGCAACCAACGTCA 1495 Query 27402 TCGGCGGCGTAACTTCCGA---CGGTAAGAAAACGGGCATGAAAGCGCTACTGTCGGCGC 27458 ||||| | || |||| ||| || || ||| || | || || ||| |||| Sbjct 1494 TCGGCACC---ACCACCGAGGCCGGCCAGCGCACCGGCCTGCAGGCCCTGCTGGCGGCCG 1438 Query 27459 AGTCGCAGCTCGGTGTCAAGCCGTGCATTCTTGGGGTGCCGGGACATGACACTCAGGCCG 27518 || ||| | || || |||||| |||| | || | ||| || | ||||| |||||| Sbjct 1437 AGGGGCAATTGGGCGTGAAGCCGCGCATCATCGGCGCGCCCGGCCTGGACACCAAGGCCG 1378 Query 27519 TTGCTACTGAACTGCTGGGCGTGGCGCAA-AGCTTGCGCGGGTTTGCCTACCTTGCTGCT 27577 | || | || | ||||||||| |||| |||| || ||||| || | || Sbjct 1377 TGGCCGTGGCCATGGCGTCCGTGGCGCAGCAGCTC-CGCGCCTTCACCTACGTTTCGGCC 1319 Query 27578 AATGGCTGCAAAACGGTGG--------------AGGAAGCTAT--TGC-CTATCGCGAGA 27620 ||| ||| || || ||||||| ||| ||| |||| Sbjct 1318 CGCGGCGCCAA--CGATGCCTATGCCGCCACCAAGGAAGCCGCCGTGCTCTACCGCGGCG 1261 Query 27621 ATTTCAGTCAGCGCGAGGGAATGCTGATCTGGCCTGACTTCATCAACTTTGACACCGTGC 27680 | ||| | |||||||||| ||| |||| ||||| ||||| | || ||| || | Sbjct 1260 AGTTCGGGCAGCGCGAGGTGATGGTGATGTGGCCCAACTTCCTGGCCTGGGACGGCGAGG 1201 Query 27681 TGAAAGCAGACGCGACGGCTTACGCCTCCGCCCGTGCGCTCGGCCTGCGTGCCAAAATCG 27740 | | | || | || |||| |||| ||| || |||||||| ||||| | | Sbjct 1200 CGGGCGAGGCCGTGGAGGTGCCCGCCGTCGCCTATGCCCTGGGCCTGCGCGCCAAGCTGG 1141 Query 27741 ACGAGCAGATCGGCTGGCATAAAACCCTGTCCAATGTGGGTGTGAACGGTGTCACCGGCA 27800 | || |||| |||||||| || || | ||||| ||| || ||||| || |||| Sbjct 1140 ATCAGGAGATTGGCTGGCACAAGTCCATTTCCAACATGGTGGTCAACGGCGTGGAAGGCA 1081 Query 27801 TTTC-CGCTGATGTGTTCTGGGATCTGCAGGACCCGGCAACCGATGCGGGACTGCTGAAC 27859 | | ||| |||||||||| || |||||| |||||| | ||||||||| |||||| Sbjct 1080 TCACGCGC-GATGTGTTCTTCGACCTGCAGAGCCCGGCCAGCGATGCGGGCTACCTGAAC 1022 Query 27860 AAAAATGACGTCACCACATTGATCCGCAAAGACGGCTTCCGCTTCTGGGGTTCCCGTTGT 27919 | || || |||||||| |||| || ||||| | ||||||||||||||| || Sbjct 1021 AGCAAGGAAGTCACCACGCTGATTCGGCGCGACGGATACCGCTTCTGGGGTTCGCG-CAC 963 Query 27920 CTCAGTGACGATCCGC----TGTTTGCTTTTGAGAACTACACCCGTACGGCGCAGGTGCT 27975 || | | | | || ||| || |||||| ||||||||| || || |||||||| Sbjct 962 CTGCGAGGCCGCCGGCGGAAAGTTCGCCTTTGAGCCCTACACCCGCACCGCCCAGGTGCT 903 Query 27976 GGCTGACACTATGGCGGAGGCGCAC 28000 ||| ||||| || || || |||||| Sbjct 902 GGCCGACACCATCGCAGAAGCGCAC 878 Score = 87.8 bits (96), Expect = 4e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 28313 AACCTGTTCAACGACGGGAACAACTGGCAGGGGATCGTTGAGTCTCTGACCCTGCCGAAA 28372 ||||||||| |||||| || | |||| |||| |||| ||| | |||||||| ||| Sbjct 521 AACCTGTTCGGCGACGGCAATATCTGGAAGGGCGAGATTGATTCTGTCACCCTGCCCAAA 462 Query 28373 TTTACCCGCAAGTTTGAGAAGTATCGCGGCGGCGGTATGCCGGGCGCAGTGGATGTGGAC 28432 | ||||||||| | ||| | | ||||||||||| |||| ||| | || || |||||| Sbjct 461 CTCACCCGCAAGGTGGAGGAATGGCGCGGCGGCGGCATGCACGGCCCCGTCGAAGTGGAC 402 Query 28433 ATGGGGCTGGA 28443 | || ||||| Sbjct 401 TTCGGCCTGGA 391 >seq6580 Length=2144 Score = 80.6 bits (88), Expect = 6e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 34071 TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT 34117 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1373 TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACAT 1327 Score = 80.6 bits (88), Expect = 6e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 38 TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT 84 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1373 TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACAT 1327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109006776923922