Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq29522 109 8e-19 >seq29522 Length=371 Score = 109 bits (120), Expect = 8e-19 Identities = 73/80 (91%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 198935 GGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAG 198994 |||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||| || Sbjct 202 GGCCCCTTAGCTCAGT-GGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAG 260 Query 198995 TCCAGTAGGGGCCACCAGAT 199014 ||||| ||||||||||| || Sbjct 261 TCCAGCAGGGGCCACCAAAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741120220283320