Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq33741 259 1e-64 >seq33741 Length=260 Score = 259 bits (286), Expect = 1e-64 Identities = 209/253 (83%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 569 GCGGGGTTACGTTCGCTGTACCGGCCGCAACCGCAAACAGCAGTTGAATGGGCAGATGAG 628 ||||| | |||||||| | |||||| | ||||| ||||| ||||| |||||||| || Sbjct 8 GCGGGACTCCGTTCGCTTTTCCGGCCCGAGCCGCAGACAGCTGTTGAGTGGGCAGACGAT 67 Query 629 AATTATTATCTCCCGAAAGAGTCTGCCTACCAGGAAGGGCGCTGGGAAACACTGCCATTT 688 || ||||| ||||||||||||||||| || |||||||||||||||||||| | || || Sbjct 68 AACTATTACCTCCCGAAAGAGTCTGCTTATCAGGAAGGGCGCTGGGAAACCTTACCCTTC 127 Query 689 CAGCGTGCAATTATGAATGCGATGGGTAATGACTATATTCGCGAGGTGAATGTCGTTAAA 748 |||||||| || |||||||| ||||| || |||||||| || || || |||||||| ||| Sbjct 128 CAGCGTGCGATCATGAATGCCATGGGCAACGACTATATCCGTGAAGTAAATGTCGTGAAA 187 Query 749 TCGGCTCGTGTCGGCTACTCAAAAATGTTGCTCGGCGTTTACGCATATTTCATCCAACAT 808 || || ||||| ||||||||||| ||| ||||||| || || || ||||||||||| ||| Sbjct 188 TCTGCCCGTGTTGGCTACTCAAAGATGCTGCTCGGGGTGTATGCGTATTTCATCCAGCAT 247 Query 809 AAACAGCGTAACT 821 || ||||| |||| Sbjct 248 AAGCAGCGAAACT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141818523679566