Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq33741 289 8e-74 >seq33741 Length=260 Score = 289 bits (320), Expect = 8e-74 Identities = 216/253 (85%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 569 GCGGGGCTACGTTCGCTTTACCGGCCAGAACCGCAAACAGCGGTTGAATGGGCAGATGAG 628 ||||| || |||||||||| |||||| || ||||| ||||| ||||| |||||||| || Sbjct 8 GCGGGACTCCGTTCGCTTTTCCGGCCCGAGCCGCAGACAGCTGTTGAGTGGGCAGACGAT 67 Query 629 AATTACTATCTCCCGAAAGAGTCTGCCTACCAGGAAGGGCGCTGGGAAACACTGCCATTT 688 || || || ||||||||||||||||| || |||||||||||||||||||| | || || Sbjct 68 AACTATTACCTCCCGAAAGAGTCTGCTTATCAGGAAGGGCGCTGGGAAACCTTACCCTTC 127 Query 689 CAGCGTGCAATTATGAATGCGATGGGCAATGACTATATCCGCGAAGTGAATGTCGTTAAA 748 |||||||| || |||||||| |||||||| ||||||||||| ||||| |||||||| ||| Sbjct 128 CAGCGTGCGATCATGAATGCCATGGGCAACGACTATATCCGTGAAGTAAATGTCGTGAAA 187 Query 749 TCTGCTCGTGTCGGCTACTCAAAAATGTTGCTCGGCGTTTACGCATATTTCATCCAGCAT 808 ||||| ||||| ||||||||||| ||| ||||||| || || || ||||||||||||||| Sbjct 188 TCTGCCCGTGTTGGCTACTCAAAGATGCTGCTCGGGGTGTATGCGTATTTCATCCAGCAT 247 Query 809 AAACAGCGTAACT 821 || ||||| |||| Sbjct 248 AAGCAGCGAAACT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144988385351904