Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq9250 89.7 2e-13 >seq9250 Length=1556 Score = 89.7 bits (98), Expect = 2e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 30147 CACTCGCTTGCGATTCCAGACGGAAATATCTGATATTCCGATTGCTAACAAAGCTTACCG 30206 ||| ||| ||| |||| ||||| | | || ||||| || || |||| ||||| ||| Sbjct 371 CACACGCAAGCGGTTCCGCGAGGAAACAGCCGAGATTCCCATCGCGAACAGAGCTTTCCG 312 Query 30207 GCTTCGCGCGCTGGACAGAATGGCGGCAAATACTGAGAAGATGCGCAACTTCGCGCTTAC 30266 |||||||| || | ||||||| | || | ||||| ||||||||| | ||||| || Sbjct 311 GCTTCGCGGCCTAGGGCGAATGGCTGAGAAGGCCGAGAACATGCGCAACCTAGCGCTGAC 252 Query 30267 TGCTCAGTTAATTGAACAGGCTGCTAAAGAGTGCGGCGA 30305 ||| ||| | || ||||| || || || |||||||| Sbjct 251 TGCCCAGCTGTACGAGCAGGCGGCCAAGGAATGCGGCGA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152169353519814