Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq1131 423 4e-114 seq8149 237 3e-58 seq8333 212 1e-50 seq7410 134 3e-27 seq29522 109 1e-19 seq1720 102 2e-17 seq16944 91.5 3e-14 >seq1131 Length=8710 Score = 423 bits (468), Expect = 4e-114 Identities = 1443/2200 (66%), Gaps = 84/2200 (4%) Strand=Plus/Minus Query 10961 CTGAAGTCGCGCCAGATAGGTGCCACGTTCTACTTTGCCCGCGAGGCGCTGATTGACGCG 11020 ||||||||||| ||||| || ||||| | ||||||||||||||||||||||| ||||| Sbjct 5099 CTGAAGTCGCGGCAGATCGGGGCCACTTGGTACTTTGCCCGCGAGGCGCTGAT--ACGCG 5042 Query 11021 C--TGACCACCGGGCGCAACCAGATATTTTTGTCGGCCAGCAAGGCGCAGGCGCACGTCT 11078 | | || |||||||| ||||| || | || || ||||||||||||||| | Sbjct 5041 CCATCACGGAGGGGCGCAATCAGATTTTCCTTTCTGCATCAAAGGCGCAGGCGCACCAGT 4982 Query 11079 TTAAAAACTACATCATTGACTTTGCCCGCCAGGTGGACGTTGACCTGAAGGGCGACCCGA 11138 | || | ||||| | | ||||||| | | ||||| ||| || |||| |||||||| | Sbjct 4981 TCAAGACGTACATGCTGGCCTTTGCCGGGCTGGTGGGCGTGGAGCTGAGCGGCGACCCTA 4922 Query 11139 TTGTGCTGCCGAACGGTGCCCGCCTGATTTTTCTTGGCACCAACGTGCGCACCGCGCAGA 11198 | |||||| |||||||||| ||| ||| | |||||||| | | || |||||| Sbjct 4921 TCGTGCTGTCGAACGGTGCGGAGCTGCACTTTTTGGGCACCAATGCGAAGACGGCGCAGG 4862 Query 11199 GCTACACCGGCAACCTGTATCTCGATGAATATTTCTGGATACCGAAATTCCAGGAGCTGC 11258 | || |||| || | || ||||||| | || ||| | || || | |||| Sbjct 4861 GGCGCAGCGGCGACTTCTACTTCGATGAGTTCTTTTGGGTGTCGGGCTTTCGCCAGCTCA 4802 Query 11259 GAAAGGTCGCCAGCGGC-ATGTCGCTGCATAAAAAGTGGCGCACCACCTACTTTTCCACG 11317 ||||| ||| ||||| ||| || ||| || | ||||||| || ||||| ||||| Sbjct 4801 ACAAGGTGGCC-GCGGCCATGGCGACGCACAAGCATTGGCGCAAGACGTACTTCTCCACC 4743 Query 11318 CCGTCGAGCCTGTCGCACTCCGCTTATCCGTTCTGGTCGGGCGAGCTGTTCAACAAAGGG 11377 |||||| | ||||||| || |||||||||||| ||| | | |||||||| Sbjct 4742 CCGTCGGCCATGTCGCATGAGGCGTATCCGTTCTGGAACGGCACGGAGCGCAACAAAG-- 4685 Query 11378 CGGCGCAGCAAAGCCGATCGCATCGAAATCGACCTGTCGCATACGCA--CCTG-GCAAAA 11434 | |||||||| | ||| |||| |||||| || || ||||| ||| || Sbjct 4684 -GCCGCAGCAAGGGCGAGGCCATCACCATCGACGTG-AGC-CACGCAGCGCTGCGC---- 4632 Query 11435 GGCGCGCTGTGCGGTGACG---GCCAGTGGCGGCAGATTGTGACGGTTGAGGATGC-GCT 11490 |||| | |||| | || || ||||||| | | |||||| | ||||| || || Sbjct 4631 GGCGGCATCCGCGGGGCCGATCGCAAGTGGCGCGACGTGGTGACGATCGAGGACGCGGCA 4572 Query 11491 GACCGGCGGCTGTAACCTGTTTGACCTCGACCAGCTCCAGCTGGAATACAGCCCGTCGGA 11550 || | ||||| |||||||| ||| ||||| |||| | | ||| ||||||| || Sbjct 4571 CGCCTG-GGCTGCAACCTGTTCGACATCGACGAGCTGCGGGAAGAAAGCAGCCCGGAAGA 4513 Query 11551 ATACCAGAACCTGCTGATGTGTGAGTTTGTGGACGATGAGGCGAGCGTGTTCCCGTTCGC 11610 | | |||||| ||||| ||||| | ||||| || ||| ||||| || || Sbjct 4512 GTTCGCCAACCTGTACATGTGCGAGTTCATCGACGACAGCGCTAGCCTGTTCACGCTCAA 4453 Query 11611 CGAGCTGCAGACCTGCATGATCGACAGCCTGGAGGAATGGAGCGACTTTAACCCGTACCT 11670 || ||||| ||||||| | |||||| ||||| ||| || | || |||| | Sbjct 4452 GGAAATGCAGGGCTGCATGGTGGACAGCTGGGAGGCGTGGGCGGATTGCAAGCCGT--TT 4395 Query 11671 GC--CGCGCCCGTTTGATTACCGCCCGGTCTGGATTGGCTACGACCCGTCGCACACCGGC 11728 || |||| |||| | || ||||| ||| | || |||||||| |||||||||||| Sbjct 4394 GCCACGCGGCCGTACGCGCACTTTCCGGTGTGGGTGGGGTACGACCCATCGCACACCGGC 4335 Query 11729 GACAGCGCAG-GCTGTGCCGTTATCGCGCCGCCGCTGGTTGCGGGCGGCAAGTTTCGCGT 11787 || || | |||| | || || || ||||||| || ||||||||||||| || | Sbjct 4334 GATGCTGCGGCGCTG-GTGGTGATTGCACCGCCGCGGGCGCCGGGCGGCAAGTTCCGGCT 4276 Query 11788 GCTGGAGCGTCACCAGTGGCGGGGCATGGACTTTGCCGCGCAGGCAAAATCCATTGAGGA 11847 |||| | || || |||| ||| |||||| | ||||||| | |||| | Sbjct 4275 GCTGCACCGGCAGCAGTTCAAGGGGGCGGACTTCGAGCAGCAGGCAGAGGCCATCCGCGC 4216 Query 11848 CTTAACGAAAAAATACACCGTCGAGTATATCGGCGTGGATGCGACCGGCATCGGCCAGGG 11907 | ||| | || | || ||| || |||||| | || | | ||| | || ||||| Sbjct 4215 GATCACGCAGAAGTTCAACGTGACCTACATCGGCATCGACACCAGCGGGCTGGGGCAGGG 4156 Query 11908 CGTTTTCCAGCTGGTTCGCCAGTTCTACCCGGCGGCGCGTGAAATCCGTTACTCGCCGGA 11967 ||| | ||| || | |||||| ||| |||||| | || ||| ||| Sbjct 4155 CGTCTATCAGAACGTCATCAAGTTCTTTCCGCAGGCGCGGGCCTACCAGTACAGCGTGGA 4096 Query 11968 AGTGAA-AACCGCGATGGTGCTGAAGGCAAAAGACACCATCAGCAGCGGACGCCTGGA-A 12025 ||||| | |||| ||||||||||||| || | ||| ||| || ||| | || | Sbjct 4095 GGTGAAGAGCCGC-CTGGTGCTGAAGGCCAAGCAGGTGATCGGCAAGGGCCGCTTTGAGA 4037 Query 12026 TACGATGCGGGCCAGACCGACATTACGCAGTCTTTTATGGCAATCCGCAAAACCATGACC 12085 | ||||| || || | | | | |||||||| |||||||| |||| Sbjct 4036 TGGACAGCGGG-TGCACGGATGTGGCAGCGGCGTTTATGGCCATCCGCAAGGTGCTGACG 3978 Query 12086 G----CCAGCGGCAACCGCTCCACCTATGAGGCGAGCCGCAGCGAGGACGCCAGCCACGC 12141 | ||||||||| | | |||||| ||| |||||||||| || ||| ||||||| Sbjct 3977 GCATCCCAGCGGCA---GAT-CACCTACACCGCGGGCCGCAGCGATGAGGCCGGCCACGC 3922 Query 12142 CGACGTCGCCTGGGCAATCATGCACGCCCTGCTTAACGAACCGCTGACCGCCGCCAGCGG 12201 || | |||||||| |||||| ||| | |||||| | || ||| || | Sbjct 3921 GGATCTGGCCTGGGCGTGCATGCATGCCTTCGACAACGAATCTTTGGCCGGCGATGTGGC 3862 Query 12202 CGGCGCTAACCCTTCAATTCTGGAATTTTACTGATGAGCAAACGCAGGGGCCGTA--AGG 12259 ||||| || |||| | |||| ||| ||||| ||| |||| ||| | | || Sbjct 3861 CGGCGGCAATTCTTCGA---TGGAGATTTTTTGATGCGCATGCGCA-AGGCAGCAACAGC 3806 Query 12260 CTTTCAACGCAAAAAC--GCAGCC-CGTACCGGCC-GCCGCACCG--CAGCAGC-----A 12308 | | ||| | | | ||||| | |||| || | ||||||| | || || | Sbjct 3805 CCACCCCCGCCACACCCGTCAGCCAGGCACCGCCCTGGCGCACCGCCCGGCGGCGGGCGA 3746 Query 12309 GGCGGAAGCGTTCACCTTTGGCGAGCCGACGCCGGTTATGGACAAGCGCGATATCCTGGA 12368 || | | ||||||||||||||||||||| || || || | | ||| | || || Sbjct 3745 GGTGCAGGCGTTCACCTTTGGCGAGCCGGAGCTGG---TGCCCCACCGCAGCCTGCTCGA 3689 Query 12369 TTATGCCGA---GTGCATCGGTAACGGGCGCTGGTATGAGCCGCCGGT-CAGCTTTCACG 12424 ||| | || | | || || || ||||| ||||||||| | |||| | ||| Sbjct 3688 TTACGTGGAAACGGCCTTC---AATGGCAAGTGGTACGAGCCGCCGCTGCAGC-TGGACG 3633 Query 12425 GGCTGGCGAAAAGCCTGCGAGCGGCGGTGCATCACAGC-TCGCCGATTTATGTGAAGCGA 12483 | ||||| ||||| || || ||| ||| || |||| || | | ||||||| Sbjct 3632 GCCTGGCCCGCGCGCTGCGCGCATCGCCGCACCACGGCAGCGCC-ATCTTTTTGAAGCGC 3574 Query 12484 AACATACTGGCGTCCACTTTTGTGCCGCACCCGATGATGAGCCAGCAGGAGTTCAGCAAG 12543 ||| |||||||| ||| || | |||||| | || || || | |||| || | Sbjct 3573 AACCTACTGGCGGCCAGCTTCATCCCGCACAAGCTGCTGTCGCACGCGACGTTCTGCGCG 3514 Query 12544 TTTGCGCTGGACTATCTGGTGTTCGGCAATGCCT--TTGCCGAGCTGCGCCGTAACGGCC 12601 | ||| |||||| ||| | | ||||||| || ||| |||| | || | | Sbjct 3513 CTGGCGTTGGACTTTCTCACGCTGGGCAATGGCTACTTG--GAGCGGGAGCGCTCCCCCT 3456 Query 12602 TCGG---TGAGCCGTGGCGACTGGAAACCACACCCGCGAAGTTTACCCGCCGGGGCGTGG 12658 |||| || | ||| | ||| ||| | | | | ||| || ||| ||| | Sbjct 3455 TCGGCACGGATC--TGG-GCCTG--CGCCATTCGCTGGGCCTGTACACG-CGGCGCGGGA 3402 Query 12659 AGGAAGGCGTTTACTGGTTTGTGAATGACTGGAAAGAGCCGCATCCGTTCGCCGCTGGCA 12718 ||| ||| || | || ||| ||||| ||| || |||||| | | | Sbjct 3401 AGGCAGGGCGCTATTTCTTCGTGCGGCACTGGGGCGAGGAACACGAGTTCGCGCCGGACT 3342 Query 12719 GCGTCTTCCACCTCATTGAGCCGGATATTAACCAGGAGCTGTACGGCCTGCCGGAATATC 12778 |||| || | ||| ||| | ||||||| |||| ||| ||||||| || | Sbjct 3341 CTGTCTGGCAGGTGCGCGAGGACGATCTGGCCCAGGAGGTGTATGGCGTGCCGGAGTACC 3282 Query 12779 TCAGCGCGTTAAACTCTGCCTGGCTGAATGAAGCGGCCACGCTGTTTCGCCGCAAGTATT 12838 | |||||||| | || ||| ||||| || || ||||| ||||||||||| ||| | Sbjct 3281 TGAGCGCGTTGCAGTCGGCCCACCTGAACGAGGCCGCCACCATGTTTCGCCGCCGGTACT 3222 Query 12839 ATCAGAACGGCGCACACGCAGGCTACATCCTGTATATGACCGACGCGGCGCAGAGCAGCA 12898 | |||||||| || || |||| |||| |||| ||| |||||| || ||||| || Sbjct 3221 ACGAGAACGGCAGCCATGCCGGCTTCATCATGTACCTGAGCGACGCCACGGTGAGCACCA 3162 Query 12899 GCGATATCGACCGGATGCGCCAGGCGATGCGCGACACGAAAGGCCTGGGTAACTTCCGCA 12958 ||| | ||| | ||||| || | ||||| | | || || | ||| |||||||||| Sbjct 3161 CCGACGTGGACACGCTGCGCGAGCAGCTGCGCAAGTCCAAGGGGCCGGGCAACTTCCGCA 3102 Query 12959 ATCTGTTTATGTACGCGCCGAACGGCAAGCCGGACGGAATTAAGATCCTGCCGCTCAGCG 13018 | ||||| || ||||||| ||||||| ||||||| | ||| | | || |||||| Sbjct 3101 ACCTGTTCCTGCACGCGCCTGGCGGCAAGGCGGACGGCTTGAAGCTGATCCCCATCAGCG 3042 Query 13019 AGGTGGCGACGAAAGATGATTTCTTTAACATCAAAAAGGCCAGCCGTGACGACCTGCTGA 13078 || | || | ||||| || ||| |||||| || ||||| | |||| ||||| Sbjct 3041 AGATCGCCGCCAAAGACGACTTCGCCGCCATCAAGAACACCAGCATGGCCGACGTGCTGG 2982 Query 13079 GCGCGCACCGCGTGCCGCCGCAAATGATGGGGATTATCCC 13118 ||| |||||||||||||| || |||| || ||||| Sbjct 2981 CCGCCCACCGCGTGCCGCCCGGCCTGCTGGGCATCATCCC 2942 Score = 149 bits (164), Expect = 1e-31 Identities = 273/395 (69%), Gaps = 25/395 (6%) Strand=Plus/Minus Query 9922 CTCAGTGCCGAGGCTTGCCGGGTCGTCGGTCACGGCCAGACCAACCAGATAGGCTTCGCC 9981 ||| ||||| ||||| || |||| |||||| |||||||| || || || || || ||||| Sbjct 6274 CTCGGTGCCCAGGCTGGCGGGGTTGTCGGTGACGGCCAGGCCCACGAGGTACGCCTCGCC 6215 Query 9982 GGTGTCGGCAAACGCCGGATTCACCTCAATGGAGGTGTAAATTTTCTGGCGTGCCTTTGT 10041 ||||||||| || | || || | ||| ||||||||||| | ||||||| ||||| | Sbjct 6214 GGTGTCGGCGAATTCGGGGTTGATCTCGATGGAGGTGTAGAGCTTCTGGCCGGCCTTGTT 6155 Query 10042 CAGCGCAACCAGCTCCGGCGTCGGGTCA-ATCCAGCCATACAGCGCCAGCTTGCCTTTCA 10100 |||| | | || |||| || ||| | | | | | | || || ||||| ||| Sbjct 6154 CAGCTCGATCAATGCCGG-GTTGGGCGAGAGCTGGGCGAAGAGGGCGAGCTT--CTT--- 6101 Query 10101 GCGGGCCGTCGGTGATTTCTGCCGCTTC------CACGGCGGTGACGTCACCAAAGCGGC 10154 | |||| | |||||| || |||| ||||| ||||| || || || Sbjct 6100 -CTTGCCGCC---GATTTCCACCTCTTCGGTCTTGACGGCCTGCACGTCGCCGTAGGCGC 6045 Query 10155 GGAAGGTGCCGTCAGGCCCGTAGCTCTTGATGTGTTCCATATTGATGCGTGCGCCGTAGA 10214 |||||| |||||||||| || ||||||||| |||| ||||||| |||| ||| Sbjct 6044 GGAAGGGGCCGTCAGGCAGCACGCCCTTGATGTGCTCCAGGCTGATGCGGGCGCTGTACG 5985 Query 10215 CGGACGGGTCATAGCTCGCCGCCATCTGCGAAATCCA----GTCACGGGAAATTTTGCGC 10270 | |||| ||||| || ||||| ||| |||| | | || || ||||| Sbjct 5984 TGTTGCGGTCGTAGCTGGCGGCCATTTGC----TCCAGGTGGGCGCGTTCGATCTTGCGG 5929 Query 10271 CCGTCGGTGGTTGCGCCTTCGACGGCGATGCGAAA 10305 ||||||||||| |||||||| ||||||| ||| || Sbjct 5928 CCGTCGGTGGTGGCGCCTTCCACGGCGACGCGGAA 5894 Score = 143 bits (158), Expect = 5e-30 Identities = 561/873 (64%), Gaps = 38/873 (4%) Strand=Plus/Minus Query 8437 CGTAGTCTTCCACCACGTAGTCCTCGTTGATGGACTCGTAGTTTTCGATGCGGTCGCGCT 8496 |||||||||| ||||||||||| |||||| |||||| |||| | | ||| || Sbjct 7741 CGTAGTCTTCGACCACGTAGTCGTCGTTGGACGACTCGAAGTTCTGCACCGCATCGACCT 7682 Query 8497 TCGGCACCTCGTCGATCAGGCGGCGGTGCGTGCCTTCCTGCCAGTAAATTGACAGGTTAT 8556 ||| | || | | |||||||| ||| | | ||||||||| || |||||||| Sbjct 7681 CGGGCGCGTCCTTCACGTGGCGGCGGCGCGCGGCGATCTGCCAGTAGATGGACAGGTTGG 7622 Query 8557 CGAGGCGCGTAATCATCAGGGCATTGGCC---GGGAAATACGGCACGCGCACGGCAGGCA 8613 || ||| | | || | ||| | ||||| | |||||| ||||| ||| Sbjct 7621 ACAG---CGTGGTGACGAGCACCTTGCCTTCGGGGAAGAAGGGCACGGTGACGGCGCGCA 7565 Query 8614 GGTTGCCGATGCGTTTCTGACTGACAATCAGGTCGGCGGCCAGCTGCTCGGTGTTGGCCT 8673 || ||| | ||| || || || | ||| |||| ||| ||| |||||| || || Sbjct 7564 GGCCGCCTACGCGCTTTTGCGAGATGACCAGATCGGTGGCGAGCGTTTCGGTGGCGGGCT 7505 Query 8674 GGCTCT-GGTTCACGATGGGGAAATACTTGTCGGCCAGCAGCTGACGGCCGCAGATCACA 8732 | |||| |||| || | ||||| ||||||| || ||| |||||| ||| | Sbjct 7504 G-CTCTTGGTTGACCAGCGGGAAGAACTTGTCATGCATGAGCCCGCGGCCGAGGATGGCG 7446 Query 8733 ACCAGCTCCGGGTCTTCCTGATACCACGGCTCAATCAGGGTGTTGGTGGCGTCCATCACC 8792 || || || ||||| | || |||||||| || | ||| || || ||| || | Sbjct 7445 ACGAGGTCGGGGTCGCCGTGGTACCACGGGTCGAGCAGCTGAATGCTGTCGTACA---CG 7389 Query 8793 AGTGCGTCAAGGTTCACATA---GGTGCGCCCTTTGCCGACCAGCACCTTGTCTTCCACC 8849 || ||||| |||||| || || || | | || | ||| ||||| | | Sbjct 7388 AGCGCGTCGAGGTTCTTGTACTCGGCGCTGGCGTCGCTGCCCA---CCTTG------ATC 7338 Query 8850 GTGCCGTTCTCAAGGGTGACGTTGCTCATCACGCGCTTGGGTGCGTTGTCGCGATACTTC 8909 || || | | || || ||| ||||| || || |||||||| |||||| Sbjct 7337 TTGGCG---------GCGTCGGAGCCCATGACGCGGGCGGCGGCCTTGTCGCGGTACTTC 7287 Query 8910 TGCAACCAGCCCACGGCCACGTCCTGCAACATGGGGTTAACGGCGCGATTGGAGGTTTTG 8969 |||| ||||||| | |||||| |||| || ||||| ||||| | |||| | | | Sbjct 7286 TGCAGCCAGCCCTTGTTCACGTCTTGCAGCAGGGGGTGGGCGGCGAGGTTGGTG--TCGG 7229 Query 8970 GCGCGGTGGGTAC--CGTTAAAGCCGATCATGATGCGGTCGAGTGACTGGCGCTTTACGA 9027 || || ||| || |||| |||||||| | ||||||||||| | ||||||||| | || Sbjct 7228 GCTCGATGGAGACGCCGTTGAAGCCGATGGTCATGCGGTCGAGCGCCTGGCGCTTGATGA 7169 Query 9028 TGGCATCACGCAGGCGGGCCTGAAAATCTTCATAGCGGGCCCACAAATCCAGCGTGTTAT 9087 | || || || | ||| | ||| || || | | ||||| || ||| | | Sbjct 7168 TCGCGTCGCGGATGCGCGTCTGGAAGTCGGGGCGGTGCGCCCAGGCGTCGAGCAGGCGGT 7109 Query 9088 AGCGAATATGAAAGTCGTAGTTCACCTGCGCGCACTCATACATGTCGCTGTCCAGCGCGG 9147 || | || |||| |||| |||| |||| | || |||| | || || Sbjct 7108 AGGTGAACTGCGTGTCGAAGTTGGTCTGCACGCAGGCGTAGCCGTCGGTTTCGGTCGATT 7049 Query 9148 CAAAGTCG-GCGGTTTCGCGCTCGTCGCCGCCTGCGGTGTCGGTGGTGCTGGCAATCGAG 9206 | | || | |||| || ||| | | |||| | || |||| |||| ||||||||| | | Sbjct 7048 CGACGTTGCGCGGCTT-GCGGACCTTGCCGGCGGCTGTGTTGGTGCGGCTGGCAATGGGG 6990 Query 9207 CCGGTCACGCCGATGCCGATTTTCTCGCCCTTCATTTCAGCAACCGGCACGATGTTGATA 9266 ||||| ||||| | ||| | || ||||| | ||| | || | ||||||||| Sbjct 6989 CCGGTGACGCCCACGCCCACCTTGTCGCCGGCCTGGTCATCCACGCCGATGATGTTGATG 6930 Query 9267 CGGGTCAGAAAGTCCGAGGACTCCTGTACGCGG 9299 || ||| || | || || ||||| | |||| Sbjct 6929 GAGGCCAGGAACGCGGACGATTCCTGCATGCGG 6897 >seq8149 Length=1767 Score = 237 bits (262), Expect = 3e-58 Identities = 463/670 (69%), Gaps = 22/670 (3%) Strand=Plus/Plus Query 25829 GGCGAAGTTCGCCAGGTAGCTGTCGGTGATGCGCTGGCGCAGGGTCAAATCTTCCAGCGG 25888 |||||||| || | ||||| ||||||||||||||||| | || || |||||||| Sbjct 1086 GGCGAAGTCGGCGAAGTAGCGATCGGTGATGCGCTGGCGAAAACCCAGGTCCTCCAGCGG 1145 Query 25889 CGGCACCGGCGTGTAGTCGTAATCAATAAAGAGCTTGCCCGCCTTCAGCGTGTCTTTATC 25948 ||||| |||||||||||||| || | | |||||||| ||||| |||||| | | || Sbjct 1146 AGGCACGGGCGTGTAGTCGTAGTCCAGCACCAGCTTGCCGGCCTTGAGCGTGGCGGTCTC 1205 Query 25949 GTTGGCCGTGTCGTCATACCAGCACGACGCGCCCAGCAGGTAACC--GGCGCTGACCAGC 26006 |||| |||| ||||| |||||| | || |||| | ||| || || || ||| Sbjct 1206 GTTGACCGTTTCGTCGTACCAGGCCTTGCCGTCCAGGATGTAGCCCAGGGCCT--TCAGT 1263 Query 26007 TCGCGGAATTTGGCATTGATGCCCGCGATAATGTCGCGCACCAGTACCGGCGT-CAGCGG 26065 |||||||| |||| |||||||| | | ||||| ||||| | || || || || Sbjct 1264 TCGCGGAACTTGGTGTTGATGCCTTCCAGGATGTCCTTGACCAG-GCTGGGGTGCATGGG 1322 Query 26066 CTTGTCGTTGGCCCACATATGCGCCTCGGCCATCGTGTCGGCAATCACCTGCGCCGTGCG 26125 |||||| |||||| | ||||||||||||||| |||||||| | ||||||||| ||||| Sbjct 1323 CTTGTCCACGGCCCAGAAATGCGCCTCGGCCATGGTGTCGGCCAGCACCTGCGCGGTGCG 1382 Query 26126 GGTGTAGTTTTCAAACGCAAACAGCGGATCGTCGCTACAGGTGCGGTTGCCCCAGAAGCG 26185 | | || || |||||| ||| | |||||||| |||||||||||| Sbjct 1383 CACGCTGGACTCGAAGCGGAACAGCTCGCTGTCCGTGCAGGTGCGCGAGCCCCAGAAGCG 1442 Query 26186 GAAGCCATCTTTACGGATCAGGGTGGTAACGCATGCCTCGTTGAGCAGGTCGGCGTCGGT 26245 | ||| | | ||||||| ||||| | || |||| |||||| | | |||| ||||| Sbjct 1443 GTGGCCCTGGCTCTGGATCAGCGTGGTGATGCCGGCCTGGTTGAGGATGCCGGCCTCGGT 1502 Query 26246 GCCGGTCTGCTGCAAATCCCAGAAGACCGAGGCG-GAAATGCCGGTCAC-ACCGTTAACG 26303 ||| |||| ||||| | | | ||| || ||||| || ||| |||| Sbjct 1503 ATCGGGGCTTTGCAGGTCCCA-ATGCACATCGCGCGAGATGCCCAGAACGCCCGACAACG 1561 Query 26304 CCAACGTTGGACAGGGTTTTGTGCCAGCCGGTGTCGGTGTCGATTTTTGCCCGCAGGCCC 26363 | ||||||||||| || ||||||||||| || |||||| || ||||||||| Sbjct 1562 GC-ACGTTGGACAGCGTCTTGTGCCAGCCCTGCTCCTGGTCGATGCGCGCGCGCAGGCCC 1620 Query 26364 AGCGCTCGGGCGGTGGCGTACGCGGTTTCGGACTGATTGGCGGTGGT-----GTTCCAGC 26418 || || ||| || || | || || ||| ||||| ||| | |||||| Sbjct 1621 AGGGCGTAGGCCACGG-GT--GAGG---CGTCCTGCACGGCGGCGGTAGACAGGTCCAGC 1674 Query 26419 -TGATAAAGTCCGGCCAGATAACCATTAATTCGCGCTGGCTGAAGTTCTCGCGGTATGCC 26477 | ||| | ||||| | | ||| | |||||||||| ||||| ||||||||| ||| Sbjct 1675 GCCTTGAAGCCGGGCCACAGCAGCATCAGCTCGCGCTGGCCGAAGTGCTCGCGGTAGGCC 1734 Query 26478 ATCGCCTCGG 26487 ||||||| Sbjct 1735 TGGGCCTCGG 1744 >seq8333 Length=1724 Score = 212 bits (234), Expect = 1e-50 Identities = 690/1060 (65%), Gaps = 34/1060 (3%) Strand=Plus/Plus Query 25839 GCCAGGTAGCTGTCGGTGATGCGCTGGCGCAGGGTCAAATCTTCCAGCGGCGGCACCGGC 25898 ||||||||| ||||||||||| ||| | || | |||||||||||||||||| Sbjct 633 GCCAGGTAGGTGTCGGTGATGGATTGGTTGAACACCAGGTTCTCCAGCGGCGGCACCGGC 692 Query 25899 GTGTAGTCGTAATCAATAAAGAGCTTGCCCGCCTTCAGCGTGTCTTTATCGTTGG---CC 25955 ||||||||||| || || ||| | ||| || || |||| | Sbjct 693 GTGTAGTCGTAGCTGATCTGCAGGCGGCCGACGGCCAGGTCTTCCTTGCCGTTCAGATCG 752 Query 25956 GTGTCGTCATACCAGCACGACGCGCCCAGCAGGTAACCGGCGCTGACCAGCTCGCGGAAT 26015 | |||| ||| ||| || || | || || ||| | ||||||| |||||||| Sbjct 753 GGGTCGAAGTAC--GCATTG-GCCCCGATGAGATAGCCGCCATTGACCAGATCGCGGAAG 809 Query 26016 TTGGCATTGATGCCCGCGATAATGTCGCGCACCAGTACCGGCGTCAGCGGCTTGTCGTTG 26075 | |||||| | | |||||||||||||| || || ||||||||| || Sbjct 810 CGGCTGTTGATGTAGCCCAGCATGTCGCGCACCAGCGAGGGGTGCATGGGCTTGTCGATG 869 Query 26076 GCCCACATATGCGCCTCGGCCATCGTGTCGGCAATCACCTGCGCCGTGCGGGTGTAGTTT 26135 | ||||| || || || |||||||| | |||||| || |||||||||||| Sbjct 870 AAGACGAAGTGCGCTTCTGCGATGGTGTCGGCCAGCACCTGGGCGGTGCGGGTGTAGGGC 929 Query 26136 TCAAACGCAAACAGCGGATCGTCG--CTA-CAGGTGCGGTTGCCCCAGAAGCGGAAGCCA 26192 ||||| || ||| || || || |||||||| |||||||||||| | || Sbjct 930 TCAAAGGCGAACTTTCCGCCGGCGGCCTCGCAGGTGCGCGAACCCCAGAAGCGGTATCCG 989 Query 26193 TCTTTACGGATCAGGGTGGTAACGCATGCCTCGTTGAGCAGGTCG---GCGTCGGTG-CC 26248 || || ||||| ||||| || | ||| | || ||||| | || ||| || || Sbjct 990 TCGCGCCGAATCAGCGTGGTGAC---TTCCTTGCTGTTCAGGTAGCCCGCATCGCTGGCC 1046 Query 26249 GGTCTGCTGCAAATCCCAGAAGACCGAGGCGGAAATGCCGGTCACACCGTTAACGCCAAC 26308 || || ||||| || |||| || | | ||||| ||| ||||| || | | Sbjct 1047 GGGCT-CTGCAGGTCGAAGAACACATCGCGCGTGATGCCTTCCACGCCGTTGACCACCAT 1105 Query 26309 GTTGGACAGGGTTTTGTGCCAGCCGGTGTCGGTGTCGATTTTTGCCCGCAGGCCCAGCGC 26368 |||||| | || ||||||||||| | || || | || || ||||||||||| || Sbjct 1106 GTTGGAAATGGACTTGTGCCAGCCAATCTCCTGATCCAGCTTGGCGCGCAGGCCCAGGGC 1165 Query 26369 TCGGGCGGTGGCGTACGCGGTTTCGGACTGATTGGCGGTGGTGTTCCAGCTGATAAAGTC 26428 |||| |||| | | ||| || || | || |||| | |||| Sbjct 1166 ATAGGCGACGGCGGGCACCTCCACGGCCTCGCCCGCCTCGCCGTCCCAGGCCAGGAAGTT 1225 Query 26429 CGGCCAGATAACCATTAATTCGCGCTGGCTGAAGTTCTCGCGGTATGCCATCGC------ 26482 ||||| || ||||| | |||||||| | ||| | ||||||| || || Sbjct 1226 GGGCCACATCACCATCACCTCGCGCTGCCCGAACTCGCCGCGGTAGAGCACGGCGGCTTC 1285 Query 26483 CTCGG-------AAAGGGTT--TTGCAGCCCCATGCCGACACATAGGCGAAGGCGCGCAG 26533 || || | ||| | ||| ||| | ||||| || |||| ||||||||| || Sbjct 1286 CTTGGTGGCGGCATAGGCATCGTTGGCGCCGCGGGCCGAAACGTAGGTGAAGGCGCGGAG 1345 Query 26534 CTGCTGAGCAATGCTGGCAAGCGCGGTCGAGACTTCCAGCGCGTCGAGACCCGGCACGCC 26593 |||||| || | | || | || | || || | ||| || || ||| |||| Sbjct 1346 CTGCTGCGCCACGGACGCCATGGCCACGGCCACGGCCTTGGTGTCCAGGCCGGGCGCGCC 1405 Query 26594 GAGAATGCGCGGTTTGACGCCGAGCTGCGTCTGCGCGCTCAGCAGCGCCTTCATGCCGGT 26653 || |||||||| || ||||| | ||| || || |||||| |||| || |||||| Sbjct 1406 GATGATGCGCGGCTTCACGCCCAATTGCCCCTCGGCCGCCAGCAGGGCCTGCAGGCCGGT 1465 Query 26654 GTAACGGCCATTCTCGTCGGTGGTGCCGATAATGTTCGAGGTGGTTTCCGCCGGGGTGGC 26713 | |||| |||| |||||||||||| | ||| | | ||||||||| | ||||| Sbjct 1466 GCGCTGGCCGGCCTCGGTGGTGGTGCCGATGACGTTGGTTGCGGTTTCCGCGGCGGTGGT 1525 Query 26714 ACCTTCCGCCACGCGCACCACGACGGTGACGGGTTTGGCCTGGTCAGCGATCGCCTGCAG 26773 ||||| |||||||||||||| || |||| || ||| || | ||| || | ||| Sbjct 1526 GCCTTCGGCCACGCGCACCACCACCGTGATGGCGCGGGCTTGCTTGCTGATGGCGTCCAG 1585 Query 26774 CGCGGCGGCCAGCGTGCCTTTTTTACCGGCTTTGCCAATGGCCGACAG-CACGTTGGTCA 26832 |||| |||| |||||||| ||||| ||||| |||| || | | | |||||||| Sbjct 1586 CGCGCCGGCGAGCGTGCCGCCCGCGCCGGCCTTGCCGATGG-CGCCGGCCGGGTTGGTCA 1644 Query 26833 GCAGCACCGGCTCATTGAGCGGGAAGGCGGCCGCATCGGC 26872 |||||||||| | || |||||||| || | || ||||| Sbjct 1645 GCAGCACCGGTACGTTCAGCGGGAACGCCTCGGCGTCGGC 1684 >seq7410 Length=1926 Score = 134 bits (148), Expect = 3e-27 Identities = 422/640 (66%), Gaps = 24/640 (4%) Strand=Plus/Minus Query 3116 ACGATAGCGGCCGACTGCACCGTGACGCGATCGGCCACCGGGCGCACGTTCTCATCGTTC 3175 ||||| |||| | ||||||| || |||| | ||||||||||| || | || Sbjct 851 ACGATGCCGGCGGCCTGCACCACCACCTCGTCGGTGAGCGGGCGCACGTCGTCGGCATTG 792 Query 3176 AGCGCGGCATCCACCACGGCCAGCAGGTCGGATGGGGCTTCGCCGTTACCCTCACGCGAC 3235 | ||||| ||||| ||||||||| ||| | || |||| | || || |||||| Sbjct 791 ACGGCGGCGGCCACCTTCGCCAGCAGGGCGGCCGTGGGCACGCCCGTGCCGTCGCGCGAC 732 Query 3236 AGCACCGTGACGGTGACGCAGGCGGGCGACGGGCTGATGGCCGAGGCATCCGCCACGCGG 3295 ||||||| || |||| ||||||| |||||| |||||| || ||| ||| || Sbjct 731 AGCACCGACACCACCACGCGCCCGGGCGATGGGCTGGTGGCCGCAGCGTCCAGCACCTGG 672 Query 3296 CCGTCGGCGCTTTTCGCATGATATTCGTAGGCACCGGTCGGCCCGGCCACGCT-CAGCCC 3354 |||||||| | || || ||| | ||||||| || ||| ||||||||||| |||| Sbjct 671 CCGTCGGCCGTCTTGGCGTGAAACACGTAGGCGCCCACCGGGCCGGCCACGCTGTAGCCG 612 Query 3355 CTCAAAGGCAGACGCCACGCGCAGCCGGAAATCGTCGTTACTTTCCATCACTGCGGGCGT 3414 | | | || | | |||| ||||| |||| | | ||||||||| ||||| Sbjct 611 CGCGGCGCGAG-CTGGATGCGCTCGCGGAAGGCGTCATCAGCTTCCATCAC-CTGGGCGA 554 Query 3415 C-GGCGGGATGGTGGTATTGTCGGCCGGGGTAAGTGTCAGGCGGGTAACGCCGTTGTTTG 3473 | ||||| | || | | || ||| || || | ||| || || ||| | | Sbjct 553 CGGGCGGCACGGCGTTGGGGTTGGCGGGCGTGACCACCAGCCGCTGCACCCCGAAGAACG 494 Query 3474 CGCCGAGCTGGTCAAGGTCACCGTCACTGGCGTAGGCCACCATATTTGCCTGCGCCGCT- 3532 ||||||||||||||||||| | | | ||||||||||| ||| || |||| |||| Sbjct 493 CGCCGAGCTGGTCAAGGTCTGCCCCGCGGGCGTAGGCCAGCATGACGGCGTGCG-CGCTG 435 Query 3533 TCATT-CACGCGCTGGCGCAGAATGACCTCGCGGTAGGCGTTTTCCTGTAACAGCTTCAC 3591 || || | |||||| |||| | ||| | |||| ||| | | ||| Sbjct 434 TCGTTGCGCGCGCT-GCGCTCGACCACCAGCTGAAAGGCCAGGCGCTGCAGCCACTTGGT 376 Query 3592 AATCGGCTCAGACTCCAGCGCCAGCGTGCGGGCAATGGTCGCCTGCTGCTCAGCCGGGTA 3651 | |||||| |||||||| |||||| | ||| ||| || | | || ||| Sbjct 375 GAGCGGCTCGGACTCCAGGGCCAGCACGTCGGC------CGCGGGCGGGT-AGGCGG--- 326 Query 3652 AAGCGAAATCAGCGTGGCTTTGCGTTCGGCCAGCAGCGTTTCGTAATCCAGCACCTCAAC 3711 || | || ||| ||| | ||||||| | ||||| | ||| |||||| || Sbjct 325 CGGCCATGTC-----GGCCTTGAGGCCGGCCAGGATGGTTTCAAAGTCCGGCACCTGCAC 271 Query 3712 CACATCGGGCGCAGGCAGCTGGCTCAGGTCAATG-GTTGC 3750 ||| |||||||| ||||||| ||||| ||| ||| ||||| Sbjct 270 CACGTCGGGCGCGGGCAGCTTGCTCATGTCGATGAGTTGC 231 >seq29522 Length=371 Score = 109 bits (120), Expect = 1e-19 Identities = 86/102 (84%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 20132 CTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAGATTTTAGCTGCTAA 20191 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct 233 CTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAAATTTTAGCAGAAAA 292 Query 20192 ATCAGCTACTTATAGCCACTCTTCGGAGTGGCTTTTTTGTTT 20233 || ||||| |||||| | ||||||| ||||||||| Sbjct 293 TACATAAACTTA-GGCCACTTTCACGAGTGGCCTTTTTGTTT 333 >seq1720 Length=6403 Score = 102 bits (112), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 26715 CCTTCCGCCACGCGCACCACGACGGTGACGGGTTTGGCCTGGTCAGCGATCGCCTGCAGC 26774 || || ||||||||||| ||||| || || | ||| || ||| || | |||| Sbjct 6311 CCATCGGCCACGCGCACGACGACCAGCACCGGGCGGCACTGCTCCTTGATGGCGTTCAGC 6252 Query 26775 GCGGCGGCCAGCGTGCCTTTTTTACCGGCTTTGCCAATGGCCGACAGC-ACGTTGGTCAG 26833 || |||||||||||| || | ||||| ||||| ||||||| || | || ||||| | Sbjct 6251 GCCTGGGCCAGCGTGCCCTTGGTGCCGGCCTTGCCGATGGCCG-CATCGACCTTGGTGAC 6193 Query 26834 CAGCACCGGCTCATTGAGCGGGAAGGCGGCCGCATCGGCATCGTCTGCGGTACAGACCAT 26893 ||||||||| || |||||||| | |||||||||||| ||| || || || | Sbjct 6192 CAGCACCGGACGGTTCAGCGGGAAAGTGGCCGCATCGGCGTCGCTGGCCGTGGCCACGAG 6133 Query 26894 GCCGACAATGGCCGTGGATACGGTG 26918 ||||| | ||||||||| ||| || Sbjct 6132 GCCGATCACGGCCGTGGACACGATG 6108 >seq16944 Length=822 Score = 91.5 bits (100), Expect = 3e-14 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 25048 GGCAGGGTAATGCGCGGCAGCACGGACAGCAGGGCGTCCACGTCCGAGGCGCA-CAGGTC 25106 |||||||| |||||||||||||| | | | |||| ||||||| ||| ||| ||| || Sbjct 38 GGCAGGGTGATGCGCGGCAGCACCGTTTGGATGGCGCCCACGTC-GAGCTGCAGCAGCTC 96 Query 25107 AGCCAGCCGCACGCCGCGCAGCGCGCCCGCGTTGGGCTTAAACAGTTCCACCTGGCTGAT 25166 | ||| ||||||||||||| |||| || ||||||| ||||| ||| ||| | || Sbjct 97 GGTGAGCTTCACGCCGCGCAGCTCGCCGGCCATGGGCTTGCGCAGTTGCACATGGGTTAT 156 Query 25167 TTCGGTCTCGCCACGTTTCAGCGGGGTTTCCAGG 25200 ||| | |||| || || | |||| |||||| Sbjct 157 TTCAGCGGCGCCGCGCTTGATCGGGAAGTCCAGG 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94443325668468